BLASTX nr result

ID: Bupleurum21_contig00006562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006562
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADK35887.1| geranylgeranyl reductase [Sesamum indicum]             140   1e-31
sp|Q9ZS34.1|CHLP_TOBAC RecName: Full=Geranylgeranyl diphosphate ...   139   2e-31
ref|XP_002284906.1| PREDICTED: geranylgeranyl diphosphate reduct...   139   2e-31
emb|CAN61003.1| hypothetical protein VITISV_009187 [Vitis vinifera]   136   2e-30
gb|AAX63898.1| geranylgeranyl reductase [Medicago truncatula]         133   1e-29

>gb|ADK35887.1| geranylgeranyl reductase [Sesamum indicum]
          Length = 465

 Score =  140 bits (353), Expect = 1e-31
 Identities = 76/119 (63%), Positives = 83/119 (69%), Gaps = 4/119 (3%)
 Frame = -3

Query: 347 ASITLKTFVGLRLTSPETTV----QSYLPTTLSYRPLRISAGKFSPKVTGRNLRVXXXXX 180
           ASI LKTFVGLR ++PE       +    TTL YR LR++A K SP+VTGRNLRV     
Sbjct: 2   ASIALKTFVGLRQSTPENNAIVLSKPIATTTLPYRRLRVNASKSSPRVTGRNLRVAVVGG 61

Query: 179 XXXXXXXXXXXXXXGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 3
                         GIETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM
Sbjct: 62  GPAGGAAAETLAKGGIETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 120


>sp|Q9ZS34.1|CHLP_TOBAC RecName: Full=Geranylgeranyl diphosphate reductase, chloroplastic;
           AltName: Full=Geranylgeranyl reductase; Flags: Precursor
           gi|3821254|emb|CAA07683.1| geranylgeranyl reductase
           [Nicotiana tabacum]
          Length = 464

 Score =  139 bits (351), Expect = 2e-31
 Identities = 76/118 (64%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
 Frame = -3

Query: 347 ASITLKTFVGLRLTSPET---TVQSYLPTTLSYRPLRISAGKFSPKVTGRNLRVXXXXXX 177
           ASI LKTF GLR +SPE    T+   LP T ++R LRI+A K SP+V GRNLRV      
Sbjct: 2   ASIALKTFTGLRQSSPENNSITLSKSLPFTQTHRRLRINASKSSPRVNGRNLRVAVVGGG 61

Query: 176 XXXXXXXXXXXXXGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 3
                        GIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDR+VTKMKM
Sbjct: 62  PAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKM 119


>ref|XP_002284906.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic
           [Vitis vinifera]
          Length = 467

 Score =  139 bits (350), Expect = 2e-31
 Identities = 78/121 (64%), Positives = 84/121 (69%), Gaps = 6/121 (4%)
 Frame = -3

Query: 347 ASITLKTFVGLRLTSPETTVQSY------LPTTLSYRPLRISAGKFSPKVTGRNLRVXXX 186
           ASI+LKTFVGLR +S +T    +      LP   + R LRI AGKFSPKVTGRNLRV   
Sbjct: 2   ASISLKTFVGLRQSSSDTYNSGHVFPVKHLPAQPASRGLRIVAGKFSPKVTGRNLRVAVV 61

Query: 185 XXXXXXXXXXXXXXXXGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMK 6
                           GIETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMK
Sbjct: 62  GGGPAGGSAAETLAKGGIETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMK 121

Query: 5   M 3
           M
Sbjct: 122 M 122


>emb|CAN61003.1| hypothetical protein VITISV_009187 [Vitis vinifera]
          Length = 447

 Score =  136 bits (343), Expect = 2e-30
 Identities = 77/121 (63%), Positives = 83/121 (68%), Gaps = 6/121 (4%)
 Frame = -3

Query: 347 ASITLKTFVGLRLTSPETTVQSY------LPTTLSYRPLRISAGKFSPKVTGRNLRVXXX 186
           ASI+LKTFVGLR +S +T    +      LP   + R LRI AGKFSPKVTGRNLRV   
Sbjct: 2   ASISLKTFVGLRQSSSDTYNSGHVFPVKHLPAQPASRGLRIVAGKFSPKVTGRNLRVAVV 61

Query: 185 XXXXXXXXXXXXXXXXGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMK 6
                           GIETFLIERK+ NCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMK
Sbjct: 62  GGGPAGGSAAETLAKGGIETFLIERKLXNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMK 121

Query: 5   M 3
           M
Sbjct: 122 M 122


>gb|AAX63898.1| geranylgeranyl reductase [Medicago truncatula]
          Length = 462

 Score =  133 bits (335), Expect = 1e-29
 Identities = 71/116 (61%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
 Frame = -3

Query: 347 ASITLKTFVGLRLTSPETTVQSYLPTTLSYR-PLRISAGKFSPKVTGRNLRVXXXXXXXX 171
           +SI LK+F+GLR++SPET   SY P  +++R    + A   SPK+ GRNLRV        
Sbjct: 2   SSIALKSFLGLRISSPETPQFSYRPKPITHRRKFTVVAAATSPKIDGRNLRVAVIGGGPA 61

Query: 170 XXXXXXXXXXXGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 3
                      GIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM
Sbjct: 62  GGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKM 117


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