BLASTX nr result

ID: Bupleurum21_contig00006554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006554
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513012.1| amidophosphoribosyltransferase, putative [Ri...    86   2e-15
gb|ABK94696.1| unknown [Populus trichocarpa]                           86   4e-15
ref|XP_002306145.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
gb|AAR06289.1| 5-phosphoribosyl-1-pyrophosphate amidotransferase...    73   3e-11
ref|NP_179247.1| amidophosphoribosyltransferase [Arabidopsis tha...    68   9e-10

>ref|XP_002513012.1| amidophosphoribosyltransferase, putative [Ricinus communis]
           gi|223548023|gb|EEF49515.1|
           amidophosphoribosyltransferase, putative [Ricinus
           communis]
          Length = 593

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 58/118 (49%), Positives = 67/118 (56%), Gaps = 24/118 (20%)
 Frame = +3

Query: 9   TTNLSHLSPPPPQLNTTASTTNKPFSLFSTKNPLSLTPKTLI-----------------S 137
           TTNLS LS P       +S  +KP      K+PLSL PKTL                  +
Sbjct: 5   TTNLSSLSKP-----ALSSLNSKPH--IPPKSPLSLLPKTLQKPSLFSSSSSSSYVFSHT 57

Query: 138 HKTHFKPFSKNPISELISHD---PYDDF----SDNDDKPREECGVVGIFADPEASRLC 290
           H+TH    SKNPISE+IS +   P D F    +D+DDKPREECGVVGIF DPEASRLC
Sbjct: 58  HRTHLALSSKNPISEVISANKKYPGDGFVDYENDDDDKPREECGVVGIFGDPEASRLC 115


>gb|ABK94696.1| unknown [Populus trichocarpa]
          Length = 585

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 55/104 (52%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
 Frame = +3

Query: 3   AATTNLSHLSPPPPQLNTTASTTNK--PFSLFSTKNPLSLTPKTLISHKTHFKPFSKNPI 176
           A TT+ S LS     LNT+     K  PF L  T     L+  T   HKTH    SKNPI
Sbjct: 6   ATTTSFSALSKHSLSLNTSPQVPQKAPPFLLPKTLQKPHLSHAT---HKTHITLSSKNPI 62

Query: 177 SELISHDPY--DDFS----DNDDKPREECGVVGIFADPEASRLC 290
           S+L+S D    DDFS    D+DDKPREECGVVGI+ DPEASRLC
Sbjct: 63  SDLVSTDKRSSDDFSSYFDDDDDKPREECGVVGIYGDPEASRLC 106


>ref|XP_002306145.1| predicted protein [Populus trichocarpa] gi|222849109|gb|EEE86656.1|
           predicted protein [Populus trichocarpa]
          Length = 586

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 54/113 (47%), Positives = 63/113 (55%), Gaps = 17/113 (15%)
 Frame = +3

Query: 3   AATTNLSHLSPPPPQLNTTASTTNKPFSLFSTKNPLSLTPKTL-----------ISHKTH 149
           A TT+ S LS P   L        KP      K PL + PKTL           +SH TH
Sbjct: 2   ADTTSFSALSKPSYSL--------KPNPQIPQKAPLFILPKTLQKPSLFPQKPCLSHNTH 53

Query: 150 FKPFSKNPISELISHDPY--DDFS----DNDDKPREECGVVGIFADPEASRLC 290
               SKNPIS+L+S +    DDFS    D+DDKPREECGVVG++ DPEASRLC
Sbjct: 54  ITLSSKNPISDLVSTNEKSPDDFSSYFDDDDDKPREECGVVGVYGDPEASRLC 106


>gb|AAR06289.1| 5-phosphoribosyl-1-pyrophosphate amidotransferase [Nicotiana
           tabacum]
          Length = 573

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 48/102 (47%), Positives = 60/102 (58%), Gaps = 6/102 (5%)
 Frame = +3

Query: 3   AATTNLSHLSPPPPQLNTTASTTNKPFSLFSTKNPLSLTPKTLIS-HKTHFKPFSKNPIS 179
           AA TN S LS P           +KPF   S K  LSL+PKT    ++T     SKNP++
Sbjct: 10  AAATNKSPLSQP----------LDKPFCSLSQKL-LSLSPKTHPKPYRTLITASSKNPLN 58

Query: 180 ELISH-----DPYDDFSDNDDKPREECGVVGIFADPEASRLC 290
           ++IS      +  D + D+DDKPREECGVVGI+ D EASRLC
Sbjct: 59  DVISFKKSADNTLDSYFDDDDKPREECGVVGIYGDSEASRLC 100


>ref|NP_179247.1| amidophosphoribosyltransferase [Arabidopsis thaliana]
           gi|75206042|sp|Q9SI61.1|ASE1_ARATH RecName:
           Full=Amidophosphoribosyltransferase 1, chloroplastic;
           Short=AtATase1; Short=PRPP1; AltName: Full=Glutamine
           phosphoribosylpyrophosphate amidotransferase 1;
           Short=AtGPRAT1; Flags: Precursor
           gi|4589981|gb|AAD26498.1| amidophosphoribosyltransferase
           [Arabidopsis thaliana] gi|330251416|gb|AEC06510.1|
           amidophosphoribosyltransferase [Arabidopsis thaliana]
          Length = 566

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 48/108 (44%), Positives = 59/108 (54%), Gaps = 12/108 (11%)
 Frame = +3

Query: 3   AATTNLSHLSPPPPQLNTTASTTNKPFSLFSTK-----------NPLSLTPKTLISHKTH 149
           AATT+ S       + N + S TN+P  LF              +PLS  P +LI   + 
Sbjct: 2   AATTSFSSSLSLITKPNNS-SYTNQPLPLFPKPFLKPPHLSLLPSPLSSPPPSLIHGVSS 60

Query: 150 FKPFSKNPISELISHDPYDDFSDNDD-KPREECGVVGIFADPEASRLC 290
           +  FS    SE  SH P+D  +D DD KPREECGVVGI+ DPEASRLC
Sbjct: 61  Y--FSSPSPSEDNSHTPFDYHNDEDDEKPREECGVVGIYGDPEASRLC 106


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