BLASTX nr result

ID: Bupleurum21_contig00006552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006552
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279239.1| PREDICTED: omega-6 fatty acid desaturase, en...   228   5e-58
gb|AEI60128.1| microsomal delta-12 oleate desaturase [Vitis labr...   227   7e-58
emb|CAN71892.1| hypothetical protein VITISV_040865 [Vitis vinifera]   226   1e-57
gb|AAN87573.1| delta 12 oleic acid desaturase FAD2 [Vernicia for...   223   1e-56
gb|AEE69020.1| Fad2 [Vernicia fordii]                                 223   1e-56

>ref|XP_002279239.1| PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum
           isozyme 2 [Vitis vinifera]
          Length = 382

 Score =  228 bits (580), Expect = 5e-58
 Identities = 104/146 (71%), Positives = 120/146 (82%), Gaps = 2/146 (1%)
 Frame = -1

Query: 433 AACYGLYRIAAVKGLSWVLLMYGAPLHVVNGFLVMIXXXXXXXXXXXHYDSSEWDWLRGA 254
           A  YGLYR+A  KGL+WVL +YG PL +VNGFLV+I           HYDSSEWDWLRGA
Sbjct: 234 AITYGLYRLAVSKGLTWVLCVYGCPLLIVNGFLVLITYLQHTHPSLPHYDSSEWDWLRGA 293

Query: 253 LATVDRDYGILNKVFHHIADTHVLHHLISSIPHYHAQEATEAIKPVLGDYYHYDGTPFYK 74
           LAT+DRDYGILNKVFHHI DTHV HHL S++PHYHA EAT+AIKPVLGDYY +DGTPFYK
Sbjct: 294 LATMDRDYGILNKVFHHITDTHVAHHLFSTLPHYHAMEATKAIKPVLGDYYQFDGTPFYK 353

Query: 73  AMWREAKECLYVEE--DKAKGVYWFK 2
           AMWREAKEC+YV+   DK+KGV+W++
Sbjct: 354 AMWREAKECVYVQSDGDKSKGVFWYQ 379


>gb|AEI60128.1| microsomal delta-12 oleate desaturase [Vitis labrusca]
          Length = 382

 Score =  227 bits (579), Expect = 7e-58
 Identities = 104/146 (71%), Positives = 120/146 (82%), Gaps = 2/146 (1%)
 Frame = -1

Query: 433 AACYGLYRIAAVKGLSWVLLMYGAPLHVVNGFLVMIXXXXXXXXXXXHYDSSEWDWLRGA 254
           A  YGLYR+A  KGL+WVL +YG PL +VNGFLV+I           HYDSSEWDWLRGA
Sbjct: 234 AITYGLYRLAVSKGLTWVLCVYGCPLLIVNGFLVLITYLQHTHPSLPHYDSSEWDWLRGA 293

Query: 253 LATVDRDYGILNKVFHHIADTHVLHHLISSIPHYHAQEATEAIKPVLGDYYHYDGTPFYK 74
           LAT+DRDYGILNKVFHHI DTHV HHL S++PHYHA EAT+AIKPVLGDYY +DGTPFYK
Sbjct: 294 LATMDRDYGILNKVFHHITDTHVAHHLFSTMPHYHAMEATKAIKPVLGDYYQFDGTPFYK 353

Query: 73  AMWREAKECLYVEE--DKAKGVYWFK 2
           AMWREAKEC+YV+   DK+KGV+W++
Sbjct: 354 AMWREAKECVYVQSDGDKSKGVFWYQ 379


>emb|CAN71892.1| hypothetical protein VITISV_040865 [Vitis vinifera]
          Length = 382

 Score =  226 bits (577), Expect = 1e-57
 Identities = 104/146 (71%), Positives = 119/146 (81%), Gaps = 2/146 (1%)
 Frame = -1

Query: 433 AACYGLYRIAAVKGLSWVLLMYGAPLHVVNGFLVMIXXXXXXXXXXXHYDSSEWDWLRGA 254
           A  YGLYR+A  KGL+WVL +YG PL +VNGFLV+I           HYDSSEWDWLRGA
Sbjct: 234 AITYGLYRLAVSKGLTWVLCVYGCPLLIVNGFLVLITYLQHTHPSLPHYDSSEWDWLRGA 293

Query: 253 LATVDRDYGILNKVFHHIADTHVLHHLISSIPHYHAQEATEAIKPVLGDYYHYDGTPFYK 74
           LAT+DRDYGILNKVFHHI DTHV HHL S+ PHYHA EAT+AIKPVLGDYY +DGTPFYK
Sbjct: 294 LATMDRDYGILNKVFHHITDTHVAHHLFSTXPHYHAMEATKAIKPVLGDYYQFDGTPFYK 353

Query: 73  AMWREAKECLYVEE--DKAKGVYWFK 2
           AMWREAKEC+YV+   DK+KGV+W++
Sbjct: 354 AMWREAKECVYVQSDGDKSKGVFWYQ 379


>gb|AAN87573.1| delta 12 oleic acid desaturase FAD2 [Vernicia fordii]
          Length = 383

 Score =  223 bits (569), Expect = 1e-56
 Identities = 102/146 (69%), Positives = 119/146 (81%), Gaps = 3/146 (2%)
 Frame = -1

Query: 433 AACYGLYRIAAVKGLSWVLLMYGAPLHVVNGFLVMIXXXXXXXXXXXHYDSSEWDWLRGA 254
           A  +GLYR+AA KGL+WV+ +YG PL +VN FLVMI           HYDSSEWDWLRGA
Sbjct: 234 AVTFGLYRLAAAKGLAWVICVYGVPLLIVNAFLVMITYLQHTHPSIPHYDSSEWDWLRGA 293

Query: 253 LATVDRDYGILNKVFHHIADTHVLHHLISSIPHYHAQEATEAIKPVLGDYYHYDGTPFYK 74
           LATVDRDYGILNKVFH+I DTHV HHL S++PHYHA EAT+AIKP+LG+YY +DGTPFYK
Sbjct: 294 LATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYK 353

Query: 73  AMWREAKECLYVEE---DKAKGVYWF 5
           AMWREAKEC+YVE    D++KGVYW+
Sbjct: 354 AMWREAKECIYVEADDGDESKGVYWY 379


>gb|AEE69020.1| Fad2 [Vernicia fordii]
          Length = 383

 Score =  223 bits (569), Expect = 1e-56
 Identities = 102/146 (69%), Positives = 119/146 (81%), Gaps = 3/146 (2%)
 Frame = -1

Query: 433 AACYGLYRIAAVKGLSWVLLMYGAPLHVVNGFLVMIXXXXXXXXXXXHYDSSEWDWLRGA 254
           A  +GLYR+AA KGL+WV+ +YG PL +VN FLVMI           HYDSSEWDWLRGA
Sbjct: 234 AVTFGLYRLAAAKGLAWVICVYGVPLLIVNAFLVMITYLQHTHPSIPHYDSSEWDWLRGA 293

Query: 253 LATVDRDYGILNKVFHHIADTHVLHHLISSIPHYHAQEATEAIKPVLGDYYHYDGTPFYK 74
           LATVDRDYGILNKVFH+I DTHV HHL S++PHYHA EAT+AIKP+LG+YY +DGTPFYK
Sbjct: 294 LATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPFYK 353

Query: 73  AMWREAKECLYVEE---DKAKGVYWF 5
           AMWREAKEC+YVE    D++KGVYW+
Sbjct: 354 AMWREAKECIYVEADDGDESKGVYWY 379


Top