BLASTX nr result

ID: Bupleurum21_contig00006548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006548
         (2008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig...   840   0.0  
ref|XP_003632072.1| PREDICTED: probable E3 ubiquitin-protein lig...   832   0.0  
ref|XP_003543557.1| PREDICTED: probable E3 ubiquitin-protein lig...   829   0.0  
emb|CBI38350.3| unnamed protein product [Vitis vinifera]              829   0.0  
emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]   828   0.0  

>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
            vinifera]
          Length = 652

 Score =  840 bits (2169), Expect = 0.0
 Identities = 392/518 (75%), Positives = 436/518 (84%), Gaps = 1/518 (0%)
 Frame = +3

Query: 249  MDSEDDMHDANDLDSLEDFYXXXXXXXXXXXXXXXYVXXXXXXXXXXXXXANRHQKNYTV 428
            M+SEDDMHDAND +SL+DFY               Y              ++R+Q+NYT+
Sbjct: 66   MESEDDMHDANDAESLDDFYSGETAADSDDLDAADYEFIDNDSDDSDDLTSHRYQQNYTI 125

Query: 429  LKEEDIQRRQEDDIARVSTVLSIPRVVACMLLRQYKWSVNNVHEAWFADEDRVRKVVGLV 608
            L E DI++RQEDDI R+STVLSIPRV A +LLR Y WSV+ VH+ WFADE++VRK VGL+
Sbjct: 126  LTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRKAVGLL 185

Query: 609  DKRAVYSQDDRELTCGICYEPYPANKINTAACGHPYCCTCWAAYISTSINDGPGCLTLRC 788
            +K  V   + RELTCGIC+E YP ++I++AACGHP+C TCWA Y ST+I DGPGCL LRC
Sbjct: 186  EKPVVQFPNARELTCGICFENYPRDRISSAACGHPFCGTCWAGYTSTAITDGPGCLMLRC 245

Query: 789  PDPSCDTAVSQDMINILVSSEDKERYYRYLLRSYVEDNRKFKWCPAPGCDCAVEFDVGSG 968
            PDP+C  AV QDMIN+L S EDKE+Y RY LRSY+EDNRK KWCPAPGCD AV+F VGSG
Sbjct: 246  PDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAVDFIVGSG 305

Query: 969  SHDVSCLCSYSFCWNCTEEAHRPVDCETVAKWILKNTAESENMNWILANSKPCPKCKRPI 1148
            S+DVSC CSYSFCWNCTEEAHRPVDC TVAKWILKN+AESENMNWILANSKPCPKCKRPI
Sbjct: 306  SYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPI 365

Query: 1149 EKNQGCMHMTCTPPCKYEFCWLCLGAWCDHGERTGGFYACNRYEAAKQEGVYDESEKRRE 1328
            EKNQGCMH+TCTPPCK+EFCWLCLGAW DHGERTGGFYACNRYE AKQEGVYDE+EKRR+
Sbjct: 366  EKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEAEKRRD 425

Query: 1329 MAKNSLERYTHYYERWATNQSSRQKALADLHQMQTVHLEKLSDKQKIPESQLKFVLEAWS 1508
            MAKNSLERYTHYYERWATNQSSRQKALADL QMQTV++EKLSDKQ  PESQLKF+ EAW 
Sbjct: 426  MAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLKFITEAWL 485

Query: 1509 QIVECRRVLKWTYAYGFYLSQDEDAKRQFFEYLQGEAEANLERLHQCAEKELQDYL-GDS 1685
            QIVECRRVLKWTYAYG+YL + E AKRQFFEYLQGEAE+ LERLHQCAEKELQ YL  D 
Sbjct: 486  QIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQTYLDADG 545

Query: 1686 TSEDFNRFRTKLAGLTSVTRNYFENLVRALENGLSDVD 1799
             S+DFN FRTKLAGLTSVTRNYFENLVRALENGLSDVD
Sbjct: 546  PSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVD 583


>ref|XP_003632072.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI7-like [Vitis
            vinifera] gi|147800085|emb|CAN64272.1| hypothetical
            protein VITISV_008933 [Vitis vinifera]
          Length = 587

 Score =  832 bits (2149), Expect = 0.0
 Identities = 392/518 (75%), Positives = 428/518 (82%), Gaps = 1/518 (0%)
 Frame = +3

Query: 249  MDSEDDMHDANDLDSLEDFYXXXXXXXXXXXXXXXYVXXXXXXXXXXXXXANRHQKNYTV 428
            MDSEDDMHDAND+DSLEDFY               Y               +RHQ NYT+
Sbjct: 1    MDSEDDMHDANDVDSLEDFYSGDTAADSDDDNDADYDFDNDSDDDADAIMLHRHQPNYTI 60

Query: 429  LKEEDIQRRQEDDIARVSTVLSIPRVVACMLLRQYKWSVNNVHEAWFADEDRVRKVVGLV 608
            LKEEDI + QEDDIARV+ VLSI  V A +LLR Y WSV+ V++ WFADE RVRK VGL+
Sbjct: 61   LKEEDIHQHQEDDIARVAAVLSIASVSASILLRHYHWSVSKVNDEWFADESRVRKAVGLL 120

Query: 609  DKRAVYSQDDRELTCGICYEPYPANKINTAACGHPYCCTCWAAYISTSINDGPGCLTLRC 788
            ++  V   + +ELTCGIC+E YP + I +AACGHP+C TCW  YISTSINDGPGCL LRC
Sbjct: 121  EEPLVRYPNAKELTCGICFETYPRDMIQSAACGHPFCSTCWEGYISTSINDGPGCLMLRC 180

Query: 789  PDPSCDTAVSQDMINILVSSEDKERYYRYLLRSYVEDNRKFKWCPAPGCDCAVEFDVGSG 968
            PDPSC  AV QDMIN+L S ED E+Y RYLLRSY+EDNRK KWCPAPGC+ AVEF  GSG
Sbjct: 181  PDPSCRAAVGQDMINLLASDEDNEKYSRYLLRSYIEDNRKTKWCPAPGCEYAVEFVAGSG 240

Query: 969  SHDVSCLCSYSFCWNCTEEAHRPVDCETVAKWILKNTAESENMNWILANSKPCPKCKRPI 1148
            S+DV+C CSY FCWNCTEEAHRPVDC TVAKWILKN+AESENMNWILANSKPCPKCKRPI
Sbjct: 241  SYDVACQCSYGFCWNCTEEAHRPVDCSTVAKWILKNSAESENMNWILANSKPCPKCKRPI 300

Query: 1149 EKNQGCMHMTCTPPCKYEFCWLCLGAWCDHGERTGGFYACNRYEAAKQEGVYDESEKRRE 1328
            EKNQGCMH+TCTPPCK+EFCWLCLGAW DHGERTGGFYACNRYEAAKQEGVYDE+E+RRE
Sbjct: 301  EKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDETERRRE 360

Query: 1329 MAKNSLERYTHYYERWATNQSSRQKALADLHQMQTVHLEKLSDKQKIPESQLKFVLEAWS 1508
            MAKNSLERYTHYYERWATNQSSRQKALADLHQMQ V++EKLSDKQ  PESQLKF+ EAW 
Sbjct: 361  MAKNSLERYTHYYERWATNQSSRQKALADLHQMQNVNIEKLSDKQCQPESQLKFITEAWL 420

Query: 1509 QIVECRRVLKWTYAYGFYLSQDEDAKRQFFEYLQGEAEANLERLHQCAEKELQDYLG-DS 1685
            QIVECRRVLKWTYAYG+YL + E  +RQFFEYLQGEAE+ LERLHQCAEKELQ YL  D 
Sbjct: 421  QIVECRRVLKWTYAYGYYLPEHELPRRQFFEYLQGEAESGLERLHQCAEKELQTYLNVDG 480

Query: 1686 TSEDFNRFRTKLAGLTSVTRNYFENLVRALENGLSDVD 1799
             S DFN FRTKLAGLTSVTRNYFENLVRALENGLSDVD
Sbjct: 481  PSADFNDFRTKLAGLTSVTRNYFENLVRALENGLSDVD 518


>ref|XP_003543557.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI7-like [Glycine
            max]
          Length = 589

 Score =  829 bits (2141), Expect = 0.0
 Identities = 387/522 (74%), Positives = 437/522 (83%), Gaps = 5/522 (0%)
 Frame = +3

Query: 249  MDSEDDMHDANDLDSLEDFYXXXXXXXXXXXXXXXYVXXXXXXXXXXXXX----ANRHQK 416
            MDSEDDMHDAND++SL+D +               Y                  + R ++
Sbjct: 1    MDSEDDMHDANDVESLDDDFYSGETEDAPMDYYSDYDDEADDYFDDADDSDRVESRRPEQ 60

Query: 417  NYTVLKEEDIQRRQEDDIARVSTVLSIPRVVACMLLRQYKWSVNNVHEAWFADEDRVRKV 596
            N+T+L+E DI++RQEDDIARV+ VLSIPRV A +LLR Y WSV+ VH+AWFADED+VRK 
Sbjct: 61   NFTILRELDIRQRQEDDIARVAAVLSIPRVSASILLRHYNWSVSKVHDAWFADEDQVRKT 120

Query: 597  VGLVDKRAVYSQDDRELTCGICYEPYPANKINTAACGHPYCCTCWAAYISTSINDGPGCL 776
            VGL++K    + + RELTCGIC+E YP  ++ +AACGHPYC +CWA YI TSINDGPGCL
Sbjct: 121  VGLLEKPVFQNSNTRELTCGICFEMYPRARVESAACGHPYCYSCWAGYIGTSINDGPGCL 180

Query: 777  TLRCPDPSCDTAVSQDMINILVSSEDKERYYRYLLRSYVEDNRKFKWCPAPGCDCAVEFD 956
             LRCPDPSC  AV QDMIN+L S EDKE+Y RYLLRSY+EDN+K KWCPAPGC+ AV FD
Sbjct: 181  VLRCPDPSCGAAVGQDMINLLASDEDKEKYDRYLLRSYIEDNKKTKWCPAPGCEYAVTFD 240

Query: 957  VGSGSHDVSCLCSYSFCWNCTEEAHRPVDCETVAKWILKNTAESENMNWILANSKPCPKC 1136
             GSG++DVSCLCSYSFCWNCTEEAHRPVDC TV+KWILKN+AESENMNWILANSKPCPKC
Sbjct: 241  AGSGNYDVSCLCSYSFCWNCTEEAHRPVDCGTVSKWILKNSAESENMNWILANSKPCPKC 300

Query: 1137 KRPIEKNQGCMHMTCTPPCKYEFCWLCLGAWCDHGERTGGFYACNRYEAAKQEGVYDESE 1316
            KRPIEKNQGCMHMTCTPPCK+EFCWLCLGAW DHGERTGGFYACNRYEAAKQEGVYDE+E
Sbjct: 301  KRPIEKNQGCMHMTCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDETE 360

Query: 1317 KRREMAKNSLERYTHYYERWATNQSSRQKALADLHQMQTVHLEKLSDKQKIPESQLKFVL 1496
            +RREMAKNSLERYTHYYERWA+NQSSRQKALADLHQMQTVH+EKLSD Q  PESQLKF+ 
Sbjct: 361  RRREMAKNSLERYTHYYERWASNQSSRQKALADLHQMQTVHIEKLSDTQCQPESQLKFIT 420

Query: 1497 EAWSQIVECRRVLKWTYAYGFYLSQDEDAKRQFFEYLQGEAEANLERLHQCAEKELQDYL 1676
            EAW QIVECRRVLKWTY+YG+YL + E AK+QFFEYLQGEAE+ LERLHQCAEKELQ +L
Sbjct: 421  EAWLQIVECRRVLKWTYSYGYYLPEHEHAKKQFFEYLQGEAESGLERLHQCAEKELQLFL 480

Query: 1677 -GDSTSEDFNRFRTKLAGLTSVTRNYFENLVRALENGLSDVD 1799
              D  S++FN FRTKLAGLTSVTRNYFENLVRALENGL+DVD
Sbjct: 481  NADGPSKEFNDFRTKLAGLTSVTRNYFENLVRALENGLADVD 522


>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  829 bits (2141), Expect = 0.0
 Identities = 387/512 (75%), Positives = 430/512 (83%), Gaps = 1/512 (0%)
 Frame = +3

Query: 267  MHDANDLDSLEDFYXXXXXXXXXXXXXXXYVXXXXXXXXXXXXXANRHQKNYTVLKEEDI 446
            MHDAND +SL+DFY               Y              ++R+Q+NYT+L E DI
Sbjct: 1    MHDANDAESLDDFYSGETAADSDDLDAADYEFIDNDSDDSDDLTSHRYQQNYTILTEADI 60

Query: 447  QRRQEDDIARVSTVLSIPRVVACMLLRQYKWSVNNVHEAWFADEDRVRKVVGLVDKRAVY 626
            ++RQEDDI R+STVLSIPRV A +LLR Y WSV+ VH+ WFADE++VRK VGL++K  V 
Sbjct: 61   RQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRKAVGLLEKPVVQ 120

Query: 627  SQDDRELTCGICYEPYPANKINTAACGHPYCCTCWAAYISTSINDGPGCLTLRCPDPSCD 806
              + RELTCGIC+E YP ++I++AACGHP+C TCWA Y ST+I DGPGCL LRCPDP+C 
Sbjct: 121  FPNARELTCGICFENYPRDRISSAACGHPFCGTCWAGYTSTAITDGPGCLMLRCPDPTCG 180

Query: 807  TAVSQDMINILVSSEDKERYYRYLLRSYVEDNRKFKWCPAPGCDCAVEFDVGSGSHDVSC 986
             AV QDMIN+L S EDKE+Y RY LRSY+EDNRK KWCPAPGCD AV+F VGSGS+DVSC
Sbjct: 181  AAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAVDFIVGSGSYDVSC 240

Query: 987  LCSYSFCWNCTEEAHRPVDCETVAKWILKNTAESENMNWILANSKPCPKCKRPIEKNQGC 1166
             CSYSFCWNCTEEAHRPVDC TVAKWILKN+AESENMNWILANSKPCPKCKRPIEKNQGC
Sbjct: 241  RCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGC 300

Query: 1167 MHMTCTPPCKYEFCWLCLGAWCDHGERTGGFYACNRYEAAKQEGVYDESEKRREMAKNSL 1346
            MH+TCTPPCK+EFCWLCLGAW DHGERTGGFYACNRYE AKQEGVYDE+EKRR+MAKNSL
Sbjct: 301  MHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEAEKRRDMAKNSL 360

Query: 1347 ERYTHYYERWATNQSSRQKALADLHQMQTVHLEKLSDKQKIPESQLKFVLEAWSQIVECR 1526
            ERYTHYYERWATNQSSRQKALADL QMQTV++EKLSDKQ  PESQLKF+ EAW QIVECR
Sbjct: 361  ERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLKFITEAWLQIVECR 420

Query: 1527 RVLKWTYAYGFYLSQDEDAKRQFFEYLQGEAEANLERLHQCAEKELQDYL-GDSTSEDFN 1703
            RVLKWTYAYG+YL + E AKRQFFEYLQGEAE+ LERLHQCAEKELQ YL  D  S+DFN
Sbjct: 421  RVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQTYLDADGPSKDFN 480

Query: 1704 RFRTKLAGLTSVTRNYFENLVRALENGLSDVD 1799
             FRTKLAGLTSVTRNYFENLVRALENGLSDVD
Sbjct: 481  EFRTKLAGLTSVTRNYFENLVRALENGLSDVD 512


>emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]
          Length = 588

 Score =  828 bits (2138), Expect = 0.0
 Identities = 390/519 (75%), Positives = 431/519 (83%), Gaps = 2/519 (0%)
 Frame = +3

Query: 249  MDSEDDMHDANDLDSLEDFYXXXXXXXXXXXXXXXYVXXXXXXXXXXXXX-ANRHQKNYT 425
            M+SEDDMHDAND +SL+DFY               Y                    +NYT
Sbjct: 1    MESEDDMHDANDAESLDDFYSGETAADSDDLDAADYEGLFFPILHGFWLPFCGGLMQNYT 60

Query: 426  VLKEEDIQRRQEDDIARVSTVLSIPRVVACMLLRQYKWSVNNVHEAWFADEDRVRKVVGL 605
            +L E DI++RQEDDI R+STVLSIPRV A +LLR Y WSV+ VH+ WFADE++VRK VGL
Sbjct: 61   ILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRKAVGL 120

Query: 606  VDKRAVYSQDDRELTCGICYEPYPANKINTAACGHPYCCTCWAAYISTSINDGPGCLTLR 785
            ++K  V   + RELTCGIC+E YP ++I++AACGHP+C TCWA Y ST+I DGPGCL LR
Sbjct: 121  LEKPVVQFPNARELTCGICFENYPRDRISSAACGHPFCGTCWAGYTSTAITDGPGCLMLR 180

Query: 786  CPDPSCDTAVSQDMINILVSSEDKERYYRYLLRSYVEDNRKFKWCPAPGCDCAVEFDVGS 965
            CPDP+C  AV QDMIN+L S EDKE+Y RY LRSY+EDNRK KWCPAPGCD AV+F VGS
Sbjct: 181  CPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAVDFIVGS 240

Query: 966  GSHDVSCLCSYSFCWNCTEEAHRPVDCETVAKWILKNTAESENMNWILANSKPCPKCKRP 1145
            GS+DVSC CSYSFCWNCTEEAHRPVDC TVAKWILKN+AESENMNWILANSKPCPKCKRP
Sbjct: 241  GSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRP 300

Query: 1146 IEKNQGCMHMTCTPPCKYEFCWLCLGAWCDHGERTGGFYACNRYEAAKQEGVYDESEKRR 1325
            IEKNQGCMH+TCTPPCK+EFCWLCLGAW DHGERTGGFYACNRYE AKQEGVYDE+EKRR
Sbjct: 301  IEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEAEKRR 360

Query: 1326 EMAKNSLERYTHYYERWATNQSSRQKALADLHQMQTVHLEKLSDKQKIPESQLKFVLEAW 1505
            +MAKNSLERYTHYYERWATNQSSRQKALADL QMQTV++EKLSDKQ  PESQLKF+ EAW
Sbjct: 361  DMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLKFITEAW 420

Query: 1506 SQIVECRRVLKWTYAYGFYLSQDEDAKRQFFEYLQGEAEANLERLHQCAEKELQDYL-GD 1682
             QIVECRRVLKWTYAYG+YL + E AKRQFFEYLQGEAE+ LERLHQCAEKELQ YL  D
Sbjct: 421  LQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQTYLDAD 480

Query: 1683 STSEDFNRFRTKLAGLTSVTRNYFENLVRALENGLSDVD 1799
              S+DFN FRTKLAGLTSVTRNYFENLVRALENGLSDVD
Sbjct: 481  GPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVD 519


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