BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006545
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB68135.1| translation initiation factor 3-like protein [Ar...   101   2e-19
emb|CAM91272.1| putative eukaryotic translation initiation facto...    87   6e-15
tpg|DAA45847.1| TPA: putative eukaryotic translation initiation ...    86   1e-14
ref|NP_001131771.1| uncharacterized protein LOC100193141 [Zea ma...    86   1e-14
ref|XP_003557379.1| PREDICTED: eukaryotic translation initiation...    85   3e-14

>emb|CAB68135.1| translation initiation factor 3-like protein [Arabidopsis thaliana]
          Length = 418

 Score =  101 bits (252), Expect = 2e-19
 Identities = 63/137 (45%), Positives = 78/137 (56%), Gaps = 28/137 (20%)
 Frame = +1

Query: 475 PDQIDAFYQYAVSV*MWKLLWRC*VF------LYQY*ALCTDIERSLNALWGKLAAELLM 636
           PDQI+A YQYA      K  + C  +      LYQY  LC+++ERSL+ALWGKLA+E+LM
Sbjct: 128 PDQIEALYQYA------KFQFECGNYSGAADYLYQYRTLCSNLERSLSALWGKLASEILM 181

Query: 637 QNWDVAFAEVNQLKEITI*SYPNKCSPSA---------------MSSTH-------GFIV 750
           QNWD+A  E+N+LKEI    +     P A                S+ H        FIV
Sbjct: 182 QNWDIALEELNRLKEIIDSKFFIAVKPGAEQDLVDALGYLNAIQTSAPHLLRYLATAFIV 241

Query: 751 NKRRRPQLKEFIKLFSQ 801
           NKRRRPQLKEFIK+  Q
Sbjct: 242 NKRRRPQLKEFIKVIQQ 258



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 27/52 (51%), Positives = 38/52 (73%)
 Frame = +3

Query: 753 QKEKTSVKRVHKVIQPEHHSVEDPIT*FLACLYVNYNFDGAQKKMKNVKRFV 908
           ++ +  +K   KVIQ EH+S +DPI  FLAC++VNY+FDGAQKKMK  +  +
Sbjct: 243 KRRRPQLKEFIKVIQQEHYSYKDPIIEFLACVFVNYDFDGAQKKMKECEEVI 294


>emb|CAM91272.1| putative eukaryotic translation initiation factor 3E [Linaria
           alpina]
          Length = 168

 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 55/131 (41%), Positives = 63/131 (48%), Gaps = 47/131 (35%)
 Frame = +1

Query: 550 FLYQY*ALCTDIERSLNALWGKLAAELLMQNWDVAFAEVNQLKEITI*SYPNKCSPSAMS 729
           +LYQY ALCT+ ERSLNALWGKLAAE+LMQNWD+A  E+N+LKEIT     N  SP    
Sbjct: 12  YLYQYRALCTNSERSLNALWGKLAAEVLMQNWDMALEELNRLKEIT--DSKNSASPMNQL 69

Query: 730 STH-----------------------------------------------GFIVNKRRRP 768
            +                                                 FIVNKRRRP
Sbjct: 70  QSRIWLMHWGLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRP 129

Query: 769 QLKEFIKLFSQ 801
           Q KEFIK+  Q
Sbjct: 130 QFKEFIKVIQQ 140


>tpg|DAA45847.1| TPA: putative eukaryotic translation initiation factor 3E subunit
           family protein [Zea mays]
          Length = 188

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 60/154 (38%), Positives = 77/154 (50%), Gaps = 40/154 (25%)
 Frame = +1

Query: 460 STKLVPDQIDAFYQYAVSV*MWKLLWRC*VF------LYQY*ALCTDIERSLNALWGKLA 621
           S  + PDQI+A YQYA      K  + C  +      LYQY ALCT+ ER+++ALWGKLA
Sbjct: 18  SLSIGPDQIEALYQYA------KFQFECGNYSGAADYLYQYGALCTNSERNVSALWGKLA 71

Query: 622 AELLMQNWDVAFAEVNQLKEITI*SYPNKCSP--------------------------SA 723
           AE+LMQNWD+A  E+N+LKEI      N  SP                          + 
Sbjct: 72  AEILMQNWDLALEELNRLKEII--DSKNFSSPLNQLQNRIWLMHWALFIFFNHIRYLNAI 129

Query: 724 MSSTH--------GFIVNKRRRPQLKEFIKLFSQ 801
            ++ H          +VNKRRR  LKE IK+  Q
Sbjct: 130 QTNAHHLIRYLATAVVVNKRRRNMLKELIKVIQQ 163


>ref|NP_001131771.1| uncharacterized protein LOC100193141 [Zea mays]
           gi|194692492|gb|ACF80330.1| unknown [Zea mays]
           gi|414884009|tpg|DAA60023.1| TPA: putative eukaryotic
           translation initiation factor 3E subunit family protein
           [Zea mays]
          Length = 436

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 46/76 (60%), Positives = 53/76 (69%), Gaps = 6/76 (7%)
 Frame = +1

Query: 475 PDQIDAFYQYAVSV*MWKLLWRC*------VFLYQY*ALCTDIERSLNALWGKLAAELLM 636
           PDQI+A YQYA      K  + C        +LYQY ALCTD ERS++ALWGKLAAE+LM
Sbjct: 124 PDQIEALYQYA------KFQFECGNYSWAAEYLYQYRALCTDTERSVSALWGKLAAEILM 177

Query: 637 QNWDVAFAEVNQLKEI 684
           QNWDVA  E N+LKEI
Sbjct: 178 QNWDVALEEFNRLKEI 193



 Score = 59.7 bits (143), Expect(2) = 4e-08
 Identities = 26/52 (50%), Positives = 38/52 (73%)
 Frame = +3

Query: 753 QKEKTSVKRVHKVIQPEHHSVEDPIT*FLACLYVNYNFDGAQKKMKNVKRFV 908
           ++ +  +K + KVIQ E HS +DPIT FL CLYVNY+FDGAQ+K+   ++ +
Sbjct: 262 KRRRNMLKELIKVIQQEQHSYKDPITEFLQCLYVNYDFDGAQQKLVECEQVI 313



 Score = 24.6 bits (52), Expect(2) = 4e-08
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 695 AIQTNAPHLQCHLPTALLSTK 757
           AIQTNA HL  +L TA++  K
Sbjct: 242 AIQTNAHHLLRYLATAVVVNK 262


>ref|XP_003557379.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           E-like isoform 2 [Brachypodium distachyon]
          Length = 396

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 6/80 (7%)
 Frame = +1

Query: 463 TKLVPDQIDAFYQYAVSV*MWKLLWRC*V------FLYQY*ALCTDIERSLNALWGKLAA 624
           +++ PDQI+A YQYA      K  + C        FLYQY ALCT+ ERSL+ALWGKLAA
Sbjct: 76  SEIGPDQIEALYQYA------KFQFECGNYSGAADFLYQYRALCTNSERSLSALWGKLAA 129

Query: 625 ELLMQNWDVAFAEVNQLKEI 684
           E+LMQNWDVA  E+N+LKE+
Sbjct: 130 EILMQNWDVAQEELNRLKEL 149



 Score = 54.3 bits (129), Expect(2) = 5e-07
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = +3

Query: 753 QKEKTSVKRVHKVIQPEHHSVEDPIT*FLACLYVNYNFDGAQKKM 887
           ++ +  +K + KVIQ E    +DPIT FL CLYVNY+FDGAQ+K+
Sbjct: 218 KRRRNMLKELIKVIQQEQQCYKDPITEFLECLYVNYDFDGAQQKL 262



 Score = 26.2 bits (56), Expect(2) = 5e-07
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 695 AIQTNAPHLQCHLPTALLSTK 757
           AIQTNAPHL  +L  A++  K
Sbjct: 198 AIQTNAPHLLRYLAAAVVVNK 218