BLASTX nr result

ID: Bupleurum21_contig00006541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006541
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276602.1| PREDICTED: uncharacterized protein LOC100255...   214   4e-54
ref|XP_002297999.1| predicted protein [Populus trichocarpa] gi|2...   214   4e-54
gb|ABK96565.1| unknown [Populus trichocarpa x Populus deltoides]      213   2e-53
emb|CBI34417.3| unnamed protein product [Vitis vinifera]              208   3e-52
ref|XP_002509888.1| transcription factor, putative [Ricinus comm...   208   3e-52

>ref|XP_002276602.1| PREDICTED: uncharacterized protein LOC100255255 [Vitis vinifera]
          Length = 684

 Score =  214 bits (546), Expect = 4e-54
 Identities = 103/146 (70%), Positives = 113/146 (77%), Gaps = 3/146 (2%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCK EGC KSAQGSTDFCKAHGGGKRCSWG
Sbjct: 465 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKSEGCGKSAQGSTDFCKAHGGGKRCSWG 524

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSGLVQDKRVHGGATVGVMVQ---DSKNSKMTNE 149
             GS FG  D PC++FARGK GLC SH+ LVQDKRVHGGAT+   VQ    SK  KM  +
Sbjct: 525 QVGSQFGSQDGPCSSFARGKTGLCASHNALVQDKRVHGGATLAHTVQIPSPSKPEKM-KD 583

Query: 148 VTTTEDSSADYMMLDNTALVPCAGST 71
           V  TED + D M +  +++V  AG T
Sbjct: 584 VVATEDMNVDIMKMMGSSIVNPAGWT 609



 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/89 (56%), Positives = 59/89 (66%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGG+RC    C K A GRT YC  HGGG+RC+F GC+KSA+G TD+C AHGGG+RCS  
Sbjct: 287 HGGGRRCQKTGCHKGAEGRTVYCKAHGGGRRCEFLGCTKSAEGRTDYCIAHGGGRRCS-- 344

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSG 233
           H+G         C   ARGK+GLC  H G
Sbjct: 345 HEG---------CTRAARGKSGLCIRHGG 364



 Score =  104 bits (260), Expect = 6e-21
 Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 17/106 (16%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGG+RC  P CTK A+G T YC  HGGGKRC   GC+K A+GST FCK HGGGKRCS+ 
Sbjct: 387 HGGGRRCQFPACTKGAQGSTMYCKAHGGGKRCTVPGCTKGAEGSTPFCKGHGGGKRCSFQ 446

Query: 319 ---------HQGSDF------GKDDS--PCNAFARGKNGLCTSHSG 233
                    H G++F      GK  +   C   ARG+   C  H G
Sbjct: 447 GGGICPKSVHGGTNFCVAHGGGKRCAVPECTKSARGRTDYCVRHGG 492



 Score =  103 bits (256), Expect = 2e-20
 Identities = 55/128 (42%), Positives = 67/128 (52%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGGKRC    CTKSA G +  C+ HGGG+RC+F  C+K AQGST +CKAHGGGKRC+  
Sbjct: 362 HGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQFPACTKGAQGSTMYCKAHGGGKRCT-- 419

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSGLVQDKRVHGGATVGVMVQDSKNSKMTNEVTT 140
             G   G + S       G    C+   G +  K VHGG    V     K   +  E T 
Sbjct: 420 VPGCTKGAEGSTPFCKGHGGGKRCSFQGGGICPKSVHGGTNFCVAHGGGKRCAVP-ECTK 478

Query: 139 TEDSSADY 116
           +     DY
Sbjct: 479 SARGRTDY 486



 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/89 (50%), Positives = 54/89 (60%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGG+RC    CTKSA GRTDYC+ HGGG+RC  EGC+++A+G +  C  HGGGKRC   
Sbjct: 312 HGGGRRCEFLGCTKSAEGRTDYCIAHGGGRRCSHEGCTRAARGKSGLCIRHGGGKRC--- 368

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSG 233
                       C   A G +GLC SH G
Sbjct: 369 --------QKENCTKSAEGLSGLCISHGG 389


>ref|XP_002297999.1| predicted protein [Populus trichocarpa] gi|222845257|gb|EEE82804.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score =  214 bits (546), Expect = 4e-54
 Identities = 99/134 (73%), Positives = 108/134 (80%), Gaps = 3/134 (2%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGGKRCAVPECTKSARGRTD+CVRHGGGKRCK EGC KSAQGSTDFCKAHGGGKRCSWG
Sbjct: 364 HGGGKRCAVPECTKSARGRTDFCVRHGGGKRCKVEGCGKSAQGSTDFCKAHGGGKRCSWG 423

Query: 319 HQGSDFGK-DDSPCNAFARGKNGLCTSHSGLVQDKRVHGGATVGVMVQDSK--NSKMTNE 149
           H GS++G     PC +FARGK GLC  HSGLVQDKRVHGG T+G MVQD K   S+ T E
Sbjct: 424 HPGSEYGNLPSGPCTSFARGKTGLCALHSGLVQDKRVHGGVTLGPMVQDPKISQSEKTKE 483

Query: 148 VTTTEDSSADYMML 107
           V T ED + D + +
Sbjct: 484 VVTVEDMTVDIVKM 497



 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/89 (56%), Positives = 58/89 (65%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGG+RC    C K A GRT YC  HGGG+RC+F GC+KSA+G TDFC AHGGG+RCS  
Sbjct: 186 HGGGRRCQKAGCHKGAEGRTVYCKAHGGGRRCEFLGCTKSAEGRTDFCIAHGGGRRCS-- 243

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSG 233
            +G         C   ARGK+GLC  H G
Sbjct: 244 REG---------CARAARGKSGLCIRHGG 263



 Score =  104 bits (259), Expect = 8e-21
 Identities = 51/99 (51%), Positives = 58/99 (58%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGGKRC    CTKSA G +  C+ HGGG+RC+F GC+K AQGST  CKAHGGGKRC+  
Sbjct: 261 HGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQFSGCTKGAQGSTMLCKAHGGGKRCT-- 318

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSGLVQDKRVHGG 203
             G   G + S       G    C    G V  K VHGG
Sbjct: 319 APGCTKGAEGSTPFCKGHGGGKRCAFQRGGVCSKSVHGG 357



 Score =  100 bits (248), Expect = 2e-19
 Identities = 44/89 (49%), Positives = 54/89 (60%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGG+RC    CTKSA GRTD+C+ HGGG+RC  EGC+++A+G +  C  HGGGKRC   
Sbjct: 211 HGGGRRCEFLGCTKSAEGRTDFCIAHGGGRRCSREGCARAARGKSGLCIRHGGGKRC--- 267

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSG 233
                       C   A G +GLC SH G
Sbjct: 268 --------QKENCTKSAEGLSGLCISHGG 288



 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 40/89 (44%), Positives = 56/89 (62%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGG+RC+   C ++ARG++  C+RHGGGKRC+ E C+KSA+G +  C +HGGG+RC + 
Sbjct: 236 HGGGRRCSREGCARAARGKSGLCIRHGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQF- 294

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSG 233
                     S C   A+G   LC +H G
Sbjct: 295 ----------SGCTKGAQGSTMLCKAHGG 313


>gb|ABK96565.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 681

 Score =  213 bits (541), Expect = 2e-53
 Identities = 107/173 (61%), Positives = 123/173 (71%), Gaps = 7/173 (4%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGGKRCAVPECTKSARGRT +CVRHGGGKRCKFEGC KSAQGSTD+CKAHGGGKRCSWG
Sbjct: 463 HGGGKRCAVPECTKSARGRTHFCVRHGGGKRCKFEGCGKSAQGSTDYCKAHGGGKRCSWG 522

Query: 319 HQGSDFGKDDS-PCNAFARGKNGLCTSHSGLVQDKRVHGGATVGVMVQDSK--NSKMTNE 149
           H GS++G   + PCN+FARGK GLC  HSGLV DKRVHGG T+G MVQD K   S+   E
Sbjct: 523 HPGSEYGNQPTGPCNSFARGKTGLCALHSGLVLDKRVHGGVTLGPMVQDPKISQSEKMKE 582

Query: 148 VTTTEDSSADYMMLDNTALVPCAGSTIG---SGWNEGGIAV-GLGASTVPVVV 2
           V T ED + D   +  +A      +T      G +   I+V   G S++PV V
Sbjct: 583 VVTAEDMTIDIAKMGTSAAASTGRTTTDLKHFGDSSTPISVREAGLSSIPVFV 635



 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/89 (57%), Positives = 59/89 (66%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGG+RC    C K A GRT YC  HGGG+RC+F GC+KSA+G TDFC AHGGG+RCS  
Sbjct: 285 HGGGRRCRKAGCLKGAEGRTVYCKAHGGGRRCEFLGCTKSAEGRTDFCIAHGGGRRCS-- 342

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSG 233
           H+G         C   ARGK+GLC  H G
Sbjct: 343 HEG---------CTRAARGKSGLCIRHGG 362



 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/99 (52%), Positives = 59/99 (59%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGGKRC    CTKSA G +  C+ HGGG+RC+F GC+K AQGST FCKAHGGGKRC+  
Sbjct: 360 HGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQFLGCTKGAQGSTMFCKAHGGGKRCT-- 417

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSGLVQDKRVHGG 203
             G   G + S       G    C    G V  K VHGG
Sbjct: 418 APGCSKGAEGSTPFCKGHGGGKRCAFQGGGVCTKSVHGG 456



 Score =  100 bits (250), Expect = 9e-20
 Identities = 44/89 (49%), Positives = 54/89 (60%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGG+RC    CTKSA GRTD+C+ HGGG+RC  EGC+++A+G +  C  HGGGKRC   
Sbjct: 310 HGGGRRCEFLGCTKSAEGRTDFCIAHGGGRRCSHEGCTRAARGKSGLCIRHGGGKRC--- 366

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSG 233
                       C   A G +GLC SH G
Sbjct: 367 --------QKENCTKSAEGLSGLCISHGG 387


>emb|CBI34417.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  208 bits (530), Expect = 3e-52
 Identities = 98/134 (73%), Positives = 105/134 (78%), Gaps = 3/134 (2%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGGKRC VPECTKSARGRTDYCVRHGGGKRCK EGC KSAQGSTDFCKAHGGGKRCSWG
Sbjct: 321 HGGGKRCTVPECTKSARGRTDYCVRHGGGKRCKSEGCGKSAQGSTDFCKAHGGGKRCSWG 380

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSGLVQDKRVHGGATVGVMVQ---DSKNSKMTNE 149
             GS FG  D PC++FARGK GLC SH+ LVQDKRVHGGAT+   VQ    SK  KM  +
Sbjct: 381 QVGSQFGSQDGPCSSFARGKTGLCASHNALVQDKRVHGGATLAHTVQIPSPSKPEKM-KD 439

Query: 148 VTTTEDSSADYMML 107
           V  TED + D M +
Sbjct: 440 VVATEDMNVDIMKM 453



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 35/85 (41%), Positives = 45/85 (52%)
 Frame = -3

Query: 487 KRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWGHQGS 308
           K C    C K ARG +  C+ HGGG+RC+  GC K A+G T +CKAHGGG+RC +     
Sbjct: 225 KTCQFKGCGKGARGASGLCIAHGGGRRCQKTGCHKGAEGRTVYCKAHGGGRRCEF----- 279

Query: 307 DFGKDDSPCNAFARGKNGLCTSHSG 233
                   C   A G+   C +H G
Sbjct: 280 ------LGCTKSAEGRTDYCIAHGG 298


>ref|XP_002509888.1| transcription factor, putative [Ricinus communis]
           gi|223549787|gb|EEF51275.1| transcription factor,
           putative [Ricinus communis]
          Length = 677

 Score =  208 bits (530), Expect = 3e-52
 Identities = 95/130 (73%), Positives = 109/130 (83%), Gaps = 3/130 (2%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGGKRCAVPECTKSARGRTD+CVRHGGGKRCK EGC KSAQGSTDFCKAHGGGKRCSWG
Sbjct: 462 HGGGKRCAVPECTKSARGRTDFCVRHGGGKRCKNEGCGKSAQGSTDFCKAHGGGKRCSWG 521

Query: 319 HQGSDFG-KDDSPCNAFARGKNGLCTSHSGLVQDKRVHGGATVGVMVQDSKN--SKMTNE 149
           H GS++G +  +PCN+FARGK GLC  HSGLVQDKRVHGGAT+G ++Q+ K+  ++   E
Sbjct: 522 HPGSEYGVQPTAPCNSFARGKKGLCALHSGLVQDKRVHGGATLGPIIQEPKSIQTEKMKE 581

Query: 148 VTTTEDSSAD 119
           V   ED + D
Sbjct: 582 VMIAEDMNVD 591



 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/89 (56%), Positives = 57/89 (64%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGG+RC  P C K A GRT YC  HGGG+RC+F GC+KSA+G TDFC AHGGG+RCS  
Sbjct: 284 HGGGRRCQKPGCHKGAEGRTVYCKSHGGGRRCEFLGCTKSAEGRTDFCIAHGGGRRCS-- 341

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSG 233
                       C   ARGK+GLC  H G
Sbjct: 342 ---------SEGCTRAARGKSGLCIRHGG 361



 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/99 (51%), Positives = 58/99 (58%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGGKRC    CTKSA G +  C+ HGGG+RC+  GC+K AQGST FCKAHGGGKRC+  
Sbjct: 359 HGGGKRCQKENCTKSAEGLSGLCISHGGGRRCQSLGCTKGAQGSTMFCKAHGGGKRCT-- 416

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSGLVQDKRVHGG 203
             G   G + S       G    C    G V  K VHGG
Sbjct: 417 APGCTKGAEGSTPFCKGHGGGKRCAFQGGGVCTKSVHGG 455



 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/89 (49%), Positives = 54/89 (60%)
 Frame = -3

Query: 499 HGGGKRCAVPECTKSARGRTDYCVRHGGGKRCKFEGCSKSAQGSTDFCKAHGGGKRCSWG 320
           HGGG+RC    CTKSA GRTD+C+ HGGG+RC  EGC+++A+G +  C  HGGGKRC   
Sbjct: 309 HGGGRRCEFLGCTKSAEGRTDFCIAHGGGRRCSSEGCTRAARGKSGLCIRHGGGKRC--- 365

Query: 319 HQGSDFGKDDSPCNAFARGKNGLCTSHSG 233
                       C   A G +GLC SH G
Sbjct: 366 --------QKENCTKSAEGLSGLCISHGG 386


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