BLASTX nr result

ID: Bupleurum21_contig00006525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006525
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530606.1| nuclear protein skip, putative [Ricinus comm...   266   1e-69
ref|XP_002283858.1| PREDICTED: SNW domain-containing protein 1-l...   263   9e-69
ref|XP_004139354.1| PREDICTED: SNW domain-containing protein 1-l...   260   1e-67
ref|XP_004149509.1| PREDICTED: puff-specific protein Bx42-like [...   258   3e-67
ref|XP_002332355.1| predicted protein [Populus trichocarpa] gi|2...   254   7e-66

>ref|XP_002530606.1| nuclear protein skip, putative [Ricinus communis]
           gi|223529854|gb|EEF31786.1| nuclear protein skip,
           putative [Ricinus communis]
          Length = 238

 Score =  266 bits (680), Expect = 1e-69
 Identities = 134/155 (86%), Positives = 136/155 (87%)
 Frame = -3

Query: 466 AKDAAMGKKSKITRDRDRDISEKVXXXXXXXXXXXXGEVMYDTRLFNQEKGMDSGFATDD 287
           AKDAAMGKKSKITRDRDRDISEKV            GEVMYD RLFNQEKGMDSGFATDD
Sbjct: 48  AKDAAMGKKSKITRDRDRDISEKVALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDD 107

Query: 286 QYNVYDKGLFNAQNTLSTLYRPKKDADSDTYGGADEQLDKIMKTDRFKPDKSFTGTSEKT 107
           QYNVYDKGLF AQ TLSTLYRPKKD DSD YGGADEQLDKIMKTDRFKPDK+F GTSEK 
Sbjct: 108 QYNVYDKGLFTAQPTLSTLYRPKKDVDSDMYGGADEQLDKIMKTDRFKPDKAFAGTSEKA 167

Query: 106 GPRDRPVEFEKEAEEADPFGLDQFLTEVKKGKKAM 2
           GPRDRPVEFEK+AEEADPFGLDQFLTEVKKGKKAM
Sbjct: 168 GPRDRPVEFEKDAEEADPFGLDQFLTEVKKGKKAM 202


>ref|XP_002283858.1| PREDICTED: SNW domain-containing protein 1-like isoform 1 [Vitis
           vinifera] gi|359484551|ref|XP_003633120.1| PREDICTED:
           SNW domain-containing protein 1-like isoform 2 [Vitis
           vinifera]
          Length = 602

 Score =  263 bits (673), Expect = 9e-69
 Identities = 131/155 (84%), Positives = 136/155 (87%)
 Frame = -3

Query: 466 AKDAAMGKKSKITRDRDRDISEKVXXXXXXXXXXXXGEVMYDTRLFNQEKGMDSGFATDD 287
           AKDAAMGKKSKITRDRDRDISEK+            GEVMYD RLFNQEKGMDSGFATDD
Sbjct: 412 AKDAAMGKKSKITRDRDRDISEKISLGMASTGAGRGGEVMYDQRLFNQEKGMDSGFATDD 471

Query: 286 QYNVYDKGLFNAQNTLSTLYRPKKDADSDTYGGADEQLDKIMKTDRFKPDKSFTGTSEKT 107
           QYNVYDKGLF AQNTLS+LYRPKKDADSD YGGADEQL+KIMKT+RFKPDK F G SE+ 
Sbjct: 472 QYNVYDKGLFTAQNTLSSLYRPKKDADSDIYGGADEQLEKIMKTERFKPDKGFAGASERA 531

Query: 106 GPRDRPVEFEKEAEEADPFGLDQFLTEVKKGKKAM 2
           GPRDRPVEFEKEAEEADPFGLDQFLTEVKKGKKAM
Sbjct: 532 GPRDRPVEFEKEAEEADPFGLDQFLTEVKKGKKAM 566


>ref|XP_004139354.1| PREDICTED: SNW domain-containing protein 1-like [Cucumis sativus]
           gi|449487951|ref|XP_004157882.1| PREDICTED: SNW
           domain-containing protein 1-like isoform 1 [Cucumis
           sativus] gi|449487953|ref|XP_004157883.1| PREDICTED: SNW
           domain-containing protein 1-like isoform 2 [Cucumis
           sativus]
          Length = 605

 Score =  260 bits (664), Expect = 1e-67
 Identities = 129/155 (83%), Positives = 136/155 (87%)
 Frame = -3

Query: 466 AKDAAMGKKSKITRDRDRDISEKVXXXXXXXXXXXXGEVMYDTRLFNQEKGMDSGFATDD 287
           AKDAAMGKKSKITRDRDRDISEKV            GEVMYD RLFNQ+KGMDSGFA DD
Sbjct: 415 AKDAAMGKKSKITRDRDRDISEKVALGMASTGAGREGEVMYDQRLFNQDKGMDSGFANDD 474

Query: 286 QYNVYDKGLFNAQNTLSTLYRPKKDADSDTYGGADEQLDKIMKTDRFKPDKSFTGTSEKT 107
           QYN+YD+GLF AQ TLSTLYRPKKDADSD YGGADEQLDKI KTDRFKPDKSF+GTSE++
Sbjct: 475 QYNIYDRGLFTAQPTLSTLYRPKKDADSDMYGGADEQLDKITKTDRFKPDKSFSGTSERS 534

Query: 106 GPRDRPVEFEKEAEEADPFGLDQFLTEVKKGKKAM 2
           GPRDRPVEFE+E EEADPFGLDQFLTEVKKGKKAM
Sbjct: 535 GPRDRPVEFEREVEEADPFGLDQFLTEVKKGKKAM 569


>ref|XP_004149509.1| PREDICTED: puff-specific protein Bx42-like [Cucumis sativus]
           gi|449523876|ref|XP_004168949.1| PREDICTED:
           puff-specific protein Bx42-like [Cucumis sativus]
          Length = 603

 Score =  258 bits (660), Expect = 3e-67
 Identities = 128/155 (82%), Positives = 135/155 (87%)
 Frame = -3

Query: 466 AKDAAMGKKSKITRDRDRDISEKVXXXXXXXXXXXXGEVMYDTRLFNQEKGMDSGFATDD 287
           AKDAAMGKKSKITRDRDRDISEKV            GEVMYD RLFNQ+KGMDSGFA DD
Sbjct: 413 AKDAAMGKKSKITRDRDRDISEKVALGMASTGAGRQGEVMYDQRLFNQDKGMDSGFANDD 472

Query: 286 QYNVYDKGLFNAQNTLSTLYRPKKDADSDTYGGADEQLDKIMKTDRFKPDKSFTGTSEKT 107
           QYN+YDKGLF AQ TLSTLYRPKKD DSD YGGADEQLDKI KTDRFKPDKSF+GT+E++
Sbjct: 473 QYNIYDKGLFTAQPTLSTLYRPKKDTDSDMYGGADEQLDKITKTDRFKPDKSFSGTAERS 532

Query: 106 GPRDRPVEFEKEAEEADPFGLDQFLTEVKKGKKAM 2
           GPRDRPVEFE+E EEADPFGLDQFLTEVKKGKKAM
Sbjct: 533 GPRDRPVEFEREVEEADPFGLDQFLTEVKKGKKAM 567


>ref|XP_002332355.1| predicted protein [Populus trichocarpa] gi|222832076|gb|EEE70553.1|
           predicted protein [Populus trichocarpa]
          Length = 596

 Score =  254 bits (648), Expect = 7e-66
 Identities = 126/155 (81%), Positives = 134/155 (86%)
 Frame = -3

Query: 466 AKDAAMGKKSKITRDRDRDISEKVXXXXXXXXXXXXGEVMYDTRLFNQEKGMDSGFATDD 287
           AKDAAMGKKSKITRDRDRDISEKV            GEV YD RLFNQEKGMDSGFA DD
Sbjct: 406 AKDAAMGKKSKITRDRDRDISEKVALGMASTGAGKGGEVAYDQRLFNQEKGMDSGFAADD 465

Query: 286 QYNVYDKGLFNAQNTLSTLYRPKKDADSDTYGGADEQLDKIMKTDRFKPDKSFTGTSEKT 107
           QYNVYDKGLF AQ TLSTLY+PKK+AD+D YGGADEQ+DKIMKT+RFKPDK F GTS++T
Sbjct: 466 QYNVYDKGLFTAQPTLSTLYQPKKNADADMYGGADEQIDKIMKTERFKPDKEFAGTSQRT 525

Query: 106 GPRDRPVEFEKEAEEADPFGLDQFLTEVKKGKKAM 2
           GPRDRPVEFEK+ EEADPFGLDQFLTEVKKGKKAM
Sbjct: 526 GPRDRPVEFEKDEEEADPFGLDQFLTEVKKGKKAM 560


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