BLASTX nr result

ID: Bupleurum21_contig00006516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006516
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306868.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002529839.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
ref|XP_004149332.1| PREDICTED: LOW QUALITY PROTEIN: TBC1 domain ...    62   4e-08
ref|NP_179634.2| RabGAP/TBC domain-containing protein [Arabidops...    61   8e-08
ref|XP_002886279.1| RabGAP/TBC domain-containing protein [Arabid...    61   8e-08

>ref|XP_002306868.1| predicted protein [Populus trichocarpa] gi|222856317|gb|EEE93864.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/42 (73%), Positives = 35/42 (83%)
 Frame = +3

Query: 240 RTSDEDLDKYFPIRPECQADVPKPRFKLRIGRTLSERRWNAA 365
           RT  EDL  ++PIRP+CQAD PKPRFK R G+TLSERRWNAA
Sbjct: 3   RTGAEDLGDFYPIRPDCQADTPKPRFKPRAGKTLSERRWNAA 44


>ref|XP_002529839.1| conserved hypothetical protein [Ricinus communis]
           gi|223530667|gb|EEF32540.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 421

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = +3

Query: 252 EDLDKYFPIRPECQADVPKPRFKLRIGRTLSERRWNAA 365
           +D+  ++PIRPECQAD PKPRFK R G+TLS RRW+AA
Sbjct: 15  DDIGTFYPIRPECQADAPKPRFKPRAGKTLSSRRWHAA 52


>ref|XP_004149332.1| PREDICTED: LOW QUALITY PROTEIN: TBC1 domain family member 15-like
           [Cucumis sativus]
          Length = 418

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 25/37 (67%), Positives = 33/37 (89%)
 Frame = +3

Query: 255 DLDKYFPIRPECQADVPKPRFKLRIGRTLSERRWNAA 365
           +LD ++PIRPECQAD+PK RFK++ G+TLS RRW+AA
Sbjct: 9   ELDAFYPIRPECQADIPKTRFKIKPGKTLSARRWDAA 45


>ref|NP_179634.2| RabGAP/TBC domain-containing protein [Arabidopsis thaliana]
           gi|238479300|ref|NP_001154525.1| RabGAP/TBC
           domain-containing protein [Arabidopsis thaliana]
           gi|330251913|gb|AEC07007.1| RabGAP/TBC domain-containing
           protein [Arabidopsis thaliana]
           gi|330251914|gb|AEC07008.1| RabGAP/TBC domain-containing
           protein [Arabidopsis thaliana]
          Length = 425

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = +3

Query: 240 RTSDEDLDKYFPIRPECQADVPKPRFKLRIGRTLSERRWNAA 365
           ++  EDL  ++P+RPECQ DVP+ RFK R G+TLS RRW+AA
Sbjct: 9   KSGGEDLQGFYPVRPECQPDVPRTRFKSRAGKTLSARRWHAA 50


>ref|XP_002886279.1| RabGAP/TBC domain-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297332119|gb|EFH62538.1| RabGAP/TBC
           domain-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 425

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/42 (59%), Positives = 33/42 (78%)
 Frame = +3

Query: 240 RTSDEDLDKYFPIRPECQADVPKPRFKLRIGRTLSERRWNAA 365
           ++  EDL  ++P+RPECQ DVP+ RFK R G+TLS RRW+AA
Sbjct: 9   KSGGEDLQGFYPVRPECQPDVPRTRFKSRAGKTLSARRWHAA 50


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