BLASTX nr result

ID: Bupleurum21_contig00006511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006511
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41233.1| unknown [Lotus japonicus]                               92   8e-17
gb|AFK40698.1| unknown [Lotus japonicus]                               91   2e-16
ref|XP_002313489.1| predicted protein [Populus trichocarpa] gi|1...    91   2e-16
ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258...    91   3e-16
gb|AFK38933.1| unknown [Medicago truncatula]                           89   9e-16

>gb|AFK41233.1| unknown [Lotus japonicus]
          Length = 172

 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 58/152 (38%), Positives = 83/152 (54%), Gaps = 6/152 (3%)
 Frame = +2

Query: 23  MANHQI---IIFLLAFAVVPLSGGQVLRGSVSCLDCDPQYDYSDIVVMVKC---TQVSVT 184
           MA  Q+   ++F LA A +  S  QV+ G VSC+DC   +D SDI V+VKC    ++++ 
Sbjct: 1   MAGFQVFTALLFALALARIDPSTCQVVNGKVSCVDCTQNHDLSDIKVLVKCEGVKKLALA 60

Query: 185 KACKNGTFVVTLPMDMSANTPSSNCATKIFSTEKQLYVENANMVAKVITAAISESADSNS 364
               NG F V LP D +  + + NC  K+     QLY    N V+++I     +S + NS
Sbjct: 61  STEDNGFFKVDLPSDKTKPSSAGNCLAKLVGGPVQLYATRQNQVSQII-----KSQEPNS 115

Query: 365 SGYTISNPLRFLTSCPFAKDDIRCQAKKSVGT 460
             YTIS PL F+ SCP    +  C+A K VG+
Sbjct: 116 --YTISTPLSFMKSCP---QNTNCKAAKPVGS 142


>gb|AFK40698.1| unknown [Lotus japonicus]
          Length = 172

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 6/152 (3%)
 Frame = +2

Query: 23  MANHQI---IIFLLAFAVVPLSGGQVLRGSVSCLDCDPQYDYSDIVVMVKC---TQVSVT 184
           MA  Q+   ++F L  A +  S  QV+ G VSC+DC   +D SDI V+VKC    ++++ 
Sbjct: 1   MAGFQVFTALLFALTLARIDPSTCQVVNGKVSCVDCTQNHDLSDIKVLVKCEGVKKLALA 60

Query: 185 KACKNGTFVVTLPMDMSANTPSSNCATKIFSTEKQLYVENANMVAKVITAAISESADSNS 364
               NG F V LP D +  + + NC  K+     QLY    N V+++I     +S + NS
Sbjct: 61  STEDNGFFKVDLPSDKTKPSSAGNCLAKLVGGPVQLYATRQNQVSQII-----KSQEPNS 115

Query: 365 SGYTISNPLRFLTSCPFAKDDIRCQAKKSVGT 460
             YTIS PL F+ SCP    +  C+A K VG+
Sbjct: 116 --YTISTPLSFMKSCP---QNTNCKAAKPVGS 142


>ref|XP_002313489.1| predicted protein [Populus trichocarpa] gi|118488493|gb|ABK96060.1|
           unknown [Populus trichocarpa]
           gi|222849897|gb|EEE87444.1| predicted protein [Populus
           trichocarpa]
          Length = 173

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 59/135 (43%), Positives = 77/135 (57%), Gaps = 6/135 (4%)
 Frame = +2

Query: 23  MANHQI-IIFLLAFAV--VPLSGGQVLRGSVSCLDCDPQYDYSDIVVMVKCTQV---SVT 184
           MA H + I+ LLA A+  + LS  QVL+G VSCLDC   YDYS+I V VKC +V   + T
Sbjct: 1   MAFHPLTIVLLLALALSGIQLSTCQVLKGKVSCLDCGGHYDYSEIKVGVKCDKVRKLATT 60

Query: 185 KACKNGTFVVTLPMDMSANTPSSNCATKIFSTEKQLYVENANMVAKVITAAISESADSNS 364
               +G+F V LP   S       C  K+     QLYV   NMV+K++     ++ DSNS
Sbjct: 61  TTQSDGSFEVKLPPGTSTAATPLICLAKLLGGPSQLYVSRQNMVSKIV-----QTHDSNS 115

Query: 365 SGYTISNPLRFLTSC 409
             YTIS PL F ++C
Sbjct: 116 --YTISTPLAFSSTC 128


>ref|XP_002274217.1| PREDICTED: uncharacterized protein LOC100258720 [Vitis vinifera]
           gi|147828169|emb|CAN68427.1| hypothetical protein
           VITISV_031997 [Vitis vinifera]
           gi|296084887|emb|CBI28296.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 48/127 (37%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
 Frame = +2

Query: 41  IIFLLAFAVVPLSGGQVLRGSVSCLDCDPQYDYSDIVVMVKCTQV---SVTKACKNGTFV 211
           + F L  A + LS   V++GSV+CLDC   +D+S I V+VKC +V   ++     +G+F 
Sbjct: 10  LFFALVLATIDLSTCHVMKGSVTCLDCHRHHDFSGIKVLVKCDRVKKLAMATTEADGSFK 69

Query: 212 VTLPMDMSANTPSSNCATKIFSTEKQLYVENANMVAKVITAAISESADSNSSGYTISNPL 391
             LP D   ++P  NC  K+     QLY    N V+K++ A        + S YTIS PL
Sbjct: 70  TNLPSDTQTSSPPLNCLAKLLGGPNQLYAFRKNTVSKIVKA-------RDDSSYTISTPL 122

Query: 392 RFLTSCP 412
            F T+CP
Sbjct: 123 SFSTTCP 129


>gb|AFK38933.1| unknown [Medicago truncatula]
          Length = 170

 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 57/144 (39%), Positives = 80/144 (55%), Gaps = 4/144 (2%)
 Frame = +2

Query: 41  IIFLLAFAVVPLSGGQVLRGSVSCLDCDPQYDYSDIVVMVKCTQV---SVTKACKNGTFV 211
           ++F L    + LS  ++L+G VSC+DC   YD SDI V VKC  V   ++T   ++G+F 
Sbjct: 10  LLFALVLVRIDLSACEILQGKVSCVDCTHSYDLSDIKVTVKCEGVKNLAMTTTEEDGSFK 69

Query: 212 VTLPMDMSANTPSS-NCATKIFSTEKQLYVENANMVAKVITAAISESADSNSSGYTISNP 388
           V LP D   NT +S NC  K+     QLY +  N V++VI     +  + NS  Y IS P
Sbjct: 70  VNLPSD---NTKTSMNCLAKLLGGPIQLYAKKQNQVSQVI-----KGKEENS--YIISTP 119

Query: 389 LRFLTSCPFAKDDIRCQAKKSVGT 460
           L FL SCP    +  C+A K +G+
Sbjct: 120 LSFLISCP---QNTNCKATKPIGS 140


Top