BLASTX nr result

ID: Bupleurum21_contig00006493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006493
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253...   190   3e-46
emb|CBI31317.3| unnamed protein product [Vitis vinifera]              190   3e-46
ref|XP_003610912.1| Far upstream element-binding protein [Medica...   176   6e-42
ref|XP_004141539.1| PREDICTED: uncharacterized protein LOC101203...   168   1e-39
ref|XP_002525522.1| nucleic acid binding protein, putative [Rici...   167   3e-39

>ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
          Length = 772

 Score =  190 bits (482), Expect = 3e-46
 Identities = 103/140 (73%), Positives = 115/140 (82%), Gaps = 4/140 (2%)
 Frame = -2

Query: 410 DISQQEVAS--SAKIED--ASEGKSMSRKMEVPNNKVGVLIGKAGDTIRYLQYNSGARIQ 243
           +I QQEV    SA+++    SE ++MSRKMEVPNNKVGVLIGKAGDTIR+LQYNSGA+IQ
Sbjct: 151 EIPQQEVGDVPSAEVQQQPTSETQTMSRKMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQ 210

Query: 242 ITRDADADPYSGTRPVEMIGTLENITKAERLIKDVIAEADAGGSPSLVARGFNTVXXXXX 63
           ITRDADADPYS +RPVE+IG+LENI KAE+LIKDVIAEADAGGSPSLVARGF T      
Sbjct: 211 ITRDADADPYSASRPVELIGSLENINKAEKLIKDVIAEADAGGSPSLVARGFATAQAVGA 270

Query: 62  XXXXXXQVPNEKVGLIIGKG 3
                 QVPNEKVGLIIGKG
Sbjct: 271 AEQVQIQVPNEKVGLIIGKG 290


>emb|CBI31317.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  190 bits (482), Expect = 3e-46
 Identities = 103/140 (73%), Positives = 115/140 (82%), Gaps = 4/140 (2%)
 Frame = -2

Query: 410 DISQQEVAS--SAKIED--ASEGKSMSRKMEVPNNKVGVLIGKAGDTIRYLQYNSGARIQ 243
           +I QQEV    SA+++    SE ++MSRKMEVPNNKVGVLIGKAGDTIR+LQYNSGA+IQ
Sbjct: 151 EIPQQEVGDVPSAEVQQQPTSETQTMSRKMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQ 210

Query: 242 ITRDADADPYSGTRPVEMIGTLENITKAERLIKDVIAEADAGGSPSLVARGFNTVXXXXX 63
           ITRDADADPYS +RPVE+IG+LENI KAE+LIKDVIAEADAGGSPSLVARGF T      
Sbjct: 211 ITRDADADPYSASRPVELIGSLENINKAEKLIKDVIAEADAGGSPSLVARGFATAQAVGA 270

Query: 62  XXXXXXQVPNEKVGLIIGKG 3
                 QVPNEKVGLIIGKG
Sbjct: 271 AEQVQIQVPNEKVGLIIGKG 290


>ref|XP_003610912.1| Far upstream element-binding protein [Medicago truncatula]
           gi|355512247|gb|AES93870.1| Far upstream element-binding
           protein [Medicago truncatula]
          Length = 807

 Score =  176 bits (445), Expect = 6e-42
 Identities = 95/156 (60%), Positives = 116/156 (74%)
 Frame = -2

Query: 470 EEVTEGEPSKHMEEPLALSADISQQEVASSAKIEDASEGKSMSRKMEVPNNKVGVLIGKA 291
           +E TE + S   ++P + S D + Q   SS + +  S   + +RK+EVP+NKVGVLIGK+
Sbjct: 144 KESTEQDASSGDKQPDSSSIDPTLQHDTSSGQKQPISGSDTTTRKIEVPSNKVGVLIGKS 203

Query: 290 GDTIRYLQYNSGARIQITRDADADPYSGTRPVEMIGTLENITKAERLIKDVIAEADAGGS 111
           GDTIRYLQYNSGA+IQITRDADADP+S TRPVE+IGTLE+I KAE+L+  VIAEADAGGS
Sbjct: 204 GDTIRYLQYNSGAKIQITRDADADPHSSTRPVELIGTLESIDKAEKLMNAVIAEADAGGS 263

Query: 110 PSLVARGFNTVXXXXXXXXXXXQVPNEKVGLIIGKG 3
           P+LVARG +             QVPNEKVGLIIGKG
Sbjct: 264 PALVARGLSPAQAIVGSDQIQIQVPNEKVGLIIGKG 299


>ref|XP_004141539.1| PREDICTED: uncharacterized protein LOC101203078 [Cucumis sativus]
           gi|449481514|ref|XP_004156205.1| PREDICTED:
           uncharacterized LOC101203078 [Cucumis sativus]
          Length = 787

 Score =  168 bits (425), Expect = 1e-39
 Identities = 92/162 (56%), Positives = 120/162 (74%), Gaps = 2/162 (1%)
 Frame = -2

Query: 482 KIAEEEVTEGEPSKHMEEPLALSA--DISQQEVASSAKIEDASEGKSMSRKMEVPNNKVG 309
           +I++E+ T+ E SK   +P  + A   + +++++++ + + +SE ++ + KMEVPN+KVG
Sbjct: 141 EISQEDKTQ-ELSKEESQPSEVEAAPPLQEEDISNAEQDQPSSESETTTYKMEVPNSKVG 199

Query: 308 VLIGKAGDTIRYLQYNSGARIQITRDADADPYSGTRPVEMIGTLENITKAERLIKDVIAE 129
           VLIGKAGDTIRYLQYNSGA+IQI RDA+ADP   TRPVE+IGT ENI KAE LI  VIAE
Sbjct: 200 VLIGKAGDTIRYLQYNSGAKIQIMRDAEADPNRLTRPVEIIGTSENIKKAEELINAVIAE 259

Query: 128 ADAGGSPSLVARGFNTVXXXXXXXXXXXQVPNEKVGLIIGKG 3
           ADAGGSPSL+ARG  +            QVPNEKVGLIIG+G
Sbjct: 260 ADAGGSPSLIARGLTSSHSIATAEQIQLQVPNEKVGLIIGRG 301


>ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223535201|gb|EEF36880.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 798

 Score =  167 bits (422), Expect = 3e-39
 Identities = 96/189 (50%), Positives = 118/189 (62%), Gaps = 23/189 (12%)
 Frame = -2

Query: 500 DDSTKLKIAEEEVTEGEPSKHMEEPLALSADISQQEVASSAKIEDASE------------ 357
           D+ T     +E  + G+  K  ++   +  DI +      +K +DA+E            
Sbjct: 126 DNDTVDNDTKEAASVGDSKKDADDNDTVDNDIKEAASVGDSKKDDATEKQQEADEETARP 185

Query: 356 -----------GKSMSRKMEVPNNKVGVLIGKAGDTIRYLQYNSGARIQITRDADADPYS 210
                       ++ SRKMEVPN+KVGVLIGK GDTIRYLQYNSGA+IQITRD DADP+S
Sbjct: 186 PEEESEPESDDAQTTSRKMEVPNDKVGVLIGKGGDTIRYLQYNSGAKIQITRDMDADPHS 245

Query: 209 GTRPVEMIGTLENITKAERLIKDVIAEADAGGSPSLVARGFNTVXXXXXXXXXXXQVPNE 30
            TRPVE+IGTL +I+KAE+LI  VIAEADAGGSPSLVARG  +            QVPNE
Sbjct: 246 TTRPVELIGTLSSISKAEKLINAVIAEADAGGSPSLVARGLPSAQTAGVGDQIEMQVPNE 305

Query: 29  KVGLIIGKG 3
           KVGLIIG+G
Sbjct: 306 KVGLIIGRG 314



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
 Frame = -2

Query: 545 DKLRTLLLQGNSVLP----DDSTKLKIAEEEVTEGEPSKHMEEPLALSADISQQEVASSA 378
           DK+  L+ +G   +     +   K++I  +   +   +    E +   + IS+ E   +A
Sbjct: 209 DKVGVLIGKGGDTIRYLQYNSGAKIQITRDMDADPHSTTRPVELIGTLSSISKAEKLINA 268

Query: 377 KIEDASEGKSMSR-----------------KMEVPNNKVGVLIGKAGDTIRYLQYNSGAR 249
            I +A  G S S                  +M+VPN KVG++IG+ GDTI+ LQ  SGAR
Sbjct: 269 VIAEADAGGSPSLVARGLPSAQTAGVGDQIEMQVPNEKVGLIIGRGGDTIKALQAKSGAR 328

Query: 248 IQ-ITRDADADPYSGTRPVEMIGTLENITKAERLIKDVIAE 129
           IQ I +       S  R V + G  + I  A  +IKDV+++
Sbjct: 329 IQLIPQHPPEGDASKERTVRVTGDRKQIEIAREMIKDVMSQ 369


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