BLASTX nr result

ID: Bupleurum21_contig00006491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006491
         (1577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272745.1| PREDICTED: F-box/kelch-repeat protein At1g67...   329   e-160
ref|XP_003531188.1| PREDICTED: F-box/kelch-repeat protein At1g67...   296   e-149
ref|XP_003538556.1| PREDICTED: F-box/kelch-repeat protein At1g67...   305   e-148
ref|XP_002327284.1| predicted protein [Populus trichocarpa] gi|2...   296   e-146
ref|XP_002514931.1| Protein AFR, putative [Ricinus communis] gi|...   281   e-143

>ref|XP_002272745.1| PREDICTED: F-box/kelch-repeat protein At1g67480 [Vitis vinifera]
           gi|297738424|emb|CBI27625.3| unnamed protein product
           [Vitis vinifera]
          Length = 385

 Score =  329 bits (844), Expect(3) = e-160
 Identities = 162/212 (76%), Positives = 177/212 (83%)
 Frame = +3

Query: 180 KRVLVSTMCFSNMVQQDTSTLSKKTSFISSPEIDDFYSPILPGLPDDVSKYCLALVPRSN 359
           KR   S MC SN VQQDT TLSK    ++S   DD Y PILPGLPDDV+KYCLALVPRSN
Sbjct: 9   KRFTQSNMCLSNSVQQDTLTLSKSNPCLTSQFADDSYGPILPGLPDDVAKYCLALVPRSN 68

Query: 360 FPAMGGVSKCWRSFIKSKELITVRKLAGLLEEWLYVLTMVDEGKESQWEVIDYMGRKHHI 539
           FPAMGGVSK WRSFI+SKE ITVRKLAG+LEEWLYVLTM  EGK S WEV+D +G KH +
Sbjct: 69  FPAMGGVSKKWRSFIRSKEFITVRKLAGMLEEWLYVLTMDAEGKGSHWEVLDCLGHKHQL 128

Query: 540 LPQMPGPVKTGFGVVVLNGKLFVIAGFSVIDGTGYASPDVYQYDSCLNSWSKLANMNVAR 719
           LP MPGPVKTGF VVVLNGKL V+AG SV+  TG AS DVYQYDSCLNSWSKLANMNVAR
Sbjct: 129 LPPMPGPVKTGFEVVVLNGKLLVMAGCSVVGRTGSASADVYQYDSCLNSWSKLANMNVAR 188

Query: 720 YDFACAEVDGMIYAVGGYGEDGNSLSCAEVYN 815
           YDFACAEV+GM+YAVGGYG DG+SLS AE+Y+
Sbjct: 189 YDFACAEVNGMVYAVGGYGADGDSLSSAEMYD 220



 Score =  194 bits (492), Expect(3) = e-160
 Identities = 89/109 (81%), Positives = 100/109 (91%)
 Frame = +2

Query: 1124 EMKNGCVMVTAHAVLEDKLFCIEWKNQRKLSIFNPKDNSWKMIPIPVTGSSSIGFRFGIL 1303
            EMKNG VMVTAHAVL  KLFC+EWKNQRKL+IFNP+DNSWKM+P+P+TGSSSIGFRFGIL
Sbjct: 277  EMKNGRVMVTAHAVLGKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGIL 336

Query: 1304 DGKLLLFAVESEPGYTTLLYDPHSPPGKEWQTSTIKPSGSCLCSVTIKA 1450
            +GKLLLF++E +PGY TLLYDP + PG EWQTS IKPSGSCLCSVTIKA
Sbjct: 337  EGKLLLFSLEEDPGYRTLLYDPDAAPGSEWQTSEIKPSGSCLCSVTIKA 385



 Score = 92.4 bits (228), Expect(3) = e-160
 Identities = 39/45 (86%), Positives = 43/45 (95%)
 Frame = +1

Query: 913  SIRRPRYKCFACGFEGKLYIMGGRSNFTIGNSRFVDVYAPERHSW 1047
            S+RRPRY CFACGFEGKLY+MGGRS+FTIGNSRFVDVY PERH+W
Sbjct: 231  SLRRPRYGCFACGFEGKLYVMGGRSSFTIGNSRFVDVYNPERHTW 275


>ref|XP_003531188.1| PREDICTED: F-box/kelch-repeat protein At1g67480-like [Glycine max]
          Length = 388

 Score =  296 bits (758), Expect(3) = e-149
 Identities = 145/223 (65%), Positives = 169/223 (75%), Gaps = 3/223 (1%)
 Frame = +3

Query: 156 MLDFDCKNKRVLVSTMCFSNMVQQDTSTLSKKTSFISSPEIDDF---YSPILPGLPDDVS 326
           M  F  + K  +   MCF+N+   D  TL+K   ++ S  +DD     SPILPGLPDDVS
Sbjct: 1   MPSFVAEKKIFVEPNMCFTNLANHDRPTLTKNNHYVRSEALDDDDDGTSPILPGLPDDVS 60

Query: 327 KYCLALVPRSNFPAMGGVSKCWRSFIKSKELITVRKLAGLLEEWLYVLTMVDEGKESQWE 506
           K+CLALVPRSNFPAMGGV K WR FI+SKE ITVRKLAG+ EEWLY+LT   EGK S WE
Sbjct: 61  KHCLALVPRSNFPAMGGVCKRWRGFIRSKEFITVRKLAGMHEEWLYILTAGSEGKGSHWE 120

Query: 507 VIDYMGRKHHILPQMPGPVKTGFGVVVLNGKLFVIAGFSVIDGTGYASPDVYQYDSCLNS 686
           V+D +G     LP MPGP K GFGVVVLNGKL V+AG+S IDGT   S +VYQYDSCLNS
Sbjct: 121 VMDCLGHNRRSLPPMPGPAKAGFGVVVLNGKLLVMAGYSSIDGTASVSAEVYQYDSCLNS 180

Query: 687 WSKLANMNVARYDFACAEVDGMIYAVGGYGEDGNSLSCAEVYN 815
           WS+L++MNVARYDFACAEVDG++YAVGGYG  G+SLS AEVY+
Sbjct: 181 WSRLSSMNVARYDFACAEVDGLVYAVGGYGATGDSLSSAEVYD 223



 Score =  194 bits (494), Expect(3) = e-149
 Identities = 88/109 (80%), Positives = 100/109 (91%)
 Frame = +2

Query: 1124 EMKNGCVMVTAHAVLEDKLFCIEWKNQRKLSIFNPKDNSWKMIPIPVTGSSSIGFRFGIL 1303
            EMKNGCVMVTA+AVLE KLFC+EWKNQRKL+IFNP+DNSWKM+P+P+TGSSSIGFRFGIL
Sbjct: 280  EMKNGCVMVTAYAVLEKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGIL 339

Query: 1304 DGKLLLFAVESEPGYTTLLYDPHSPPGKEWQTSTIKPSGSCLCSVTIKA 1450
            DGKLLLF++E EP Y TLLYDP++ PG EW TS I+PSG CLCSVTIKA
Sbjct: 340  DGKLLLFSLEEEPSYKTLLYDPNAAPGSEWHTSDIRPSGLCLCSVTIKA 388



 Score = 87.8 bits (216), Expect(3) = e-149
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = +1

Query: 913  SIRRPRYKCFACGFEGKLYIMGGRSNFTIGNSRFVDVYAPERHSW 1047
            S+RRPR+ CFACGFEGKLY+MGGRS+FTIGNS+FVDVY PE+H W
Sbjct: 234  SLRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNPEKHGW 278


>ref|XP_003538556.1| PREDICTED: F-box/kelch-repeat protein At1g67480-like [Glycine max]
          Length = 385

 Score =  305 bits (781), Expect(3) = e-148
 Identities = 147/221 (66%), Positives = 176/221 (79%)
 Frame = +3

Query: 156 MLDFDCKNKRVLVSTMCFSNMVQQDTSTLSKKTSFISSPEIDDFYSPILPGLPDDVSKYC 335
           M  F    KR +   MCF+N++ QD STLS+    +    ++  YSPILPGLPDDV++YC
Sbjct: 1   MPGFTVGKKRFIQPNMCFTNLINQDKSTLSQNNHCLFPEALNKDYSPILPGLPDDVAEYC 60

Query: 336 LALVPRSNFPAMGGVSKCWRSFIKSKELITVRKLAGLLEEWLYVLTMVDEGKESQWEVID 515
           LALVPRSNFPAMGGV K WRSFI+SKE  TVRKLAG+LEEWLY LT   EGKES WEV+D
Sbjct: 61  LALVPRSNFPAMGGVCKIWRSFIQSKEFATVRKLAGMLEEWLYFLTTDCEGKESYWEVMD 120

Query: 516 YMGRKHHILPQMPGPVKTGFGVVVLNGKLFVIAGFSVIDGTGYASPDVYQYDSCLNSWSK 695
            +G K   LP MPGP K GF VVVLNGKL V+AG+SVI+GT +AS +VYQYDSCLNSWS+
Sbjct: 121 CLGHKCRSLPPMPGPGKAGFQVVVLNGKLLVMAGYSVIEGTAFASAEVYQYDSCLNSWSR 180

Query: 696 LANMNVARYDFACAEVDGMIYAVGGYGEDGNSLSCAEVYNP 818
           L++MNV+RYDFACAEV+G++YAVGGYG +G+SLS AEVY+P
Sbjct: 181 LSDMNVSRYDFACAEVNGLVYAVGGYGVNGDSLSSAEVYDP 221



 Score =  181 bits (459), Expect(3) = e-148
 Identities = 83/109 (76%), Positives = 96/109 (88%)
 Frame = +2

Query: 1124 EMKNGCVMVTAHAVLEDKLFCIEWKNQRKLSIFNPKDNSWKMIPIPVTGSSSIGFRFGIL 1303
            E+KNGCVMVTAHAVL  KLFCIEWKNQRKL+IF+P+DNSWKM+P+P+TGSSSIGFRFGIL
Sbjct: 277  EIKNGCVMVTAHAVLGKKLFCIEWKNQRKLAIFSPEDNSWKMVPVPLTGSSSIGFRFGIL 336

Query: 1304 DGKLLLFAVESEPGYTTLLYDPHSPPGKEWQTSTIKPSGSCLCSVTIKA 1450
            DGKLLLF +E+E  + TLLYDP++  G EWQT  I+PSG CLC VTIKA
Sbjct: 337  DGKLLLFPLEAETAFQTLLYDPNASLGSEWQTCDIRPSGLCLCCVTIKA 385



 Score = 90.1 bits (222), Expect(3) = e-148
 Identities = 37/45 (82%), Positives = 43/45 (95%)
 Frame = +1

Query: 913  SIRRPRYKCFACGFEGKLYIMGGRSNFTIGNSRFVDVYAPERHSW 1047
            S+RRPR+ CFACGFEGKLY+MGGRS+FTIGNS+FVD+Y PERHSW
Sbjct: 231  SLRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKFVDIYNPERHSW 275


>ref|XP_002327284.1| predicted protein [Populus trichocarpa] gi|222835654|gb|EEE74089.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score =  296 bits (759), Expect(3) = e-146
 Identities = 148/221 (66%), Positives = 169/221 (76%)
 Frame = +3

Query: 156 MLDFDCKNKRVLVSTMCFSNMVQQDTSTLSKKTSFISSPEIDDFYSPILPGLPDDVSKYC 335
           ML      KR   + M FS ++ QD  +  +  S I +    D  SPILPGLPDDV+KYC
Sbjct: 1   MLGIVSGKKRFTEANMTFSTLITQDFKSKPRLASQIPN----DIDSPILPGLPDDVAKYC 56

Query: 336 LALVPRSNFPAMGGVSKCWRSFIKSKELITVRKLAGLLEEWLYVLTMVDEGKESQWEVID 515
           LALVPRS+FP MG V K WRSF+KSKELIT+RKLAGLLEEWLYVLTM  E KES WEV D
Sbjct: 57  LALVPRSHFPTMGSVCKKWRSFLKSKELITIRKLAGLLEEWLYVLTMDSEAKESHWEVFD 116

Query: 516 YMGRKHHILPQMPGPVKTGFGVVVLNGKLFVIAGFSVIDGTGYASPDVYQYDSCLNSWSK 695
            +G KH +LP MPGPVK  FGVVVLNGKL V+AG+SVIDGTG AS DVY+YDSCLNSW K
Sbjct: 117 CLGHKHQLLPPMPGPVKAEFGVVVLNGKLLVMAGYSVIDGTGSASADVYEYDSCLNSWRK 176

Query: 696 LANMNVARYDFACAEVDGMIYAVGGYGEDGNSLSCAEVYNP 818
           LA+MNVARY+FACAEV+G +Y VGG G DG+SLS  E+YNP
Sbjct: 177 LASMNVARYEFACAEVNGKVYVVGGNGMDGDSLSSVEMYNP 217



 Score =  190 bits (483), Expect(3) = e-146
 Identities = 89/109 (81%), Positives = 98/109 (89%)
 Frame = +2

Query: 1124 EMKNGCVMVTAHAVLEDKLFCIEWKNQRKLSIFNPKDNSWKMIPIPVTGSSSIGFRFGIL 1303
            EMKNG VMVTAHAVL  KLFC+EWKNQRKL+IF+P+DNSWKM+P+P+TGSSSIGFRFGIL
Sbjct: 273  EMKNGRVMVTAHAVLGKKLFCMEWKNQRKLAIFSPEDNSWKMVPVPLTGSSSIGFRFGIL 332

Query: 1304 DGKLLLFAVESEPGYTTLLYDPHSPPGKEWQTSTIKPSGSCLCSVTIKA 1450
            DGKLLLF+ E EPGY TLLYDP + PG EWQTS IKPSG CLCSVTIKA
Sbjct: 333  DGKLLLFSQEMEPGYRTLLYDPDASPGSEWQTSEIKPSGWCLCSVTIKA 381



 Score = 82.8 bits (203), Expect(3) = e-146
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +1

Query: 913  SIRRPRYKCFACGFEGKLYIMGGRSNFTIGNSRFVDVYAPERHSW 1047
            S+RRPR  CFAC FEGKLY+MGGRS+FTIGNS+FVDVY PE H+W
Sbjct: 227  SLRRPRRGCFACSFEGKLYVMGGRSSFTIGNSKFVDVYNPEGHTW 271


>ref|XP_002514931.1| Protein AFR, putative [Ricinus communis]
           gi|223545982|gb|EEF47485.1| Protein AFR, putative
           [Ricinus communis]
          Length = 391

 Score =  281 bits (718), Expect(3) = e-143
 Identities = 142/213 (66%), Positives = 164/213 (76%)
 Frame = +3

Query: 180 KRVLVSTMCFSNMVQQDTSTLSKKTSFISSPEIDDFYSPILPGLPDDVSKYCLALVPRSN 359
           KR+    M F   + Q   T SK    + S   DD  SPILPGLPDDV+KYCLALVPR  
Sbjct: 16  KRLTNMDMSFLTSLTQAKLTYSKNNLQLPSRVADDIDSPILPGLPDDVAKYCLALVPRPY 75

Query: 360 FPAMGGVSKCWRSFIKSKELITVRKLAGLLEEWLYVLTMVDEGKESQWEVIDYMGRKHHI 539
           FP+MG V K WRSF+KSKE + VRKLAGLLEE LYVLT+  EG +SQWEV+D +G++   
Sbjct: 76  FPSMGAVCKKWRSFMKSKEFLVVRKLAGLLEELLYVLTVDSEGTQSQWEVLDCLGQRRQ- 134

Query: 540 LPQMPGPVKTGFGVVVLNGKLFVIAGFSVIDGTGYASPDVYQYDSCLNSWSKLANMNVAR 719
           LP MPG VK GFGVV LNGKL V+AG+SVIDGTG AS DVY+YDSCLNSWSKL++MNVAR
Sbjct: 135 LPLMPGSVKAGFGVVALNGKLLVMAGYSVIDGTGSASADVYEYDSCLNSWSKLSSMNVAR 194

Query: 720 YDFACAEVDGMIYAVGGYGEDGNSLSCAEVYNP 818
           YDFACAEV+G +YAVGGYG DG+SLS AE Y+P
Sbjct: 195 YDFACAEVNGKVYAVGGYGVDGDSLSSAETYDP 227



 Score =  194 bits (494), Expect(3) = e-143
 Identities = 89/109 (81%), Positives = 99/109 (90%)
 Frame = +2

Query: 1124 EMKNGCVMVTAHAVLEDKLFCIEWKNQRKLSIFNPKDNSWKMIPIPVTGSSSIGFRFGIL 1303
            EMKNGCVMVTAHAVL  KLFC+EWKNQRKL+IFNP+DNSWKM+P+PVTGSSSIGF+FGIL
Sbjct: 283  EMKNGCVMVTAHAVLGKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPVTGSSSIGFQFGIL 342

Query: 1304 DGKLLLFAVESEPGYTTLLYDPHSPPGKEWQTSTIKPSGSCLCSVTIKA 1450
            DGKLLLF++E  P Y TLLYDP++ PG EWQTS IKPSG CLCSVTIKA
Sbjct: 343  DGKLLLFSLEKAPDYHTLLYDPNASPGSEWQTSEIKPSGQCLCSVTIKA 391



 Score = 83.6 bits (205), Expect(3) = e-143
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = +1

Query: 913  SIRRPRYKCFACGFEGKLYIMGGRSNFTIGNSRFVDVYAPERHSW 1047
            S+RRPR+ CFAC FEGKLY+MGGRS+FTIGNS+ VDVY PERH+W
Sbjct: 237  SLRRPRWGCFACSFEGKLYVMGGRSSFTIGNSKKVDVYNPERHTW 281


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