BLASTX nr result

ID: Bupleurum21_contig00006473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006473
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269504.2| PREDICTED: AP-4 complex subunit epsilon-like...   513   e-143
ref|XP_004162069.1| PREDICTED: AP-4 complex subunit epsilon-like...   510   e-142
ref|XP_004150249.1| PREDICTED: AP-4 complex subunit epsilon-like...   510   e-142
ref|XP_002519936.1| AP-1 complex subunit gamma-2, putative [Rici...   510   e-142
ref|XP_002328755.1| predicted protein [Populus trichocarpa] gi|2...   505   e-141

>ref|XP_002269504.2| PREDICTED: AP-4 complex subunit epsilon-like [Vitis vinifera]
          Length = 1489

 Score =  513 bits (1321), Expect = e-143
 Identities = 250/278 (89%), Positives = 274/278 (98%)
 Frame = -2

Query: 836  MEQLKTIGRELAMGSQGGYGQSKEFLDLIKSIGEARSKAEEDRIIVHDIETLKRRITEPD 657
            +EQLKTIGRELAMGSQGG+G SKEFLDL+KSIGEARSKAEEDRI++H+IETLKRRI EPD
Sbjct: 516  LEQLKTIGRELAMGSQGGFGNSKEFLDLVKSIGEARSKAEEDRIVLHEIETLKRRIVEPD 575

Query: 656  IPKRKMKEYIIRLVYIEMLGHDASFGYIHAMKMTHDDSLVLKRTGYLAVTLFLNEDHDLI 477
            IPKRKMKE+IIRLVY+EMLGHDASFGYIHA+KMTHDDSL+LKRTGYLAVTLFLNEDHDLI
Sbjct: 576  IPKRKMKEFIIRLVYVEMLGHDASFGYIHAVKMTHDDSLLLKRTGYLAVTLFLNEDHDLI 635

Query: 476  ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHAKEAVRRKAVMA 297
            ILIVNTIQKDLKSDNYLVVCAALNAVC+LINEETIPAVLPQVVELLGH+KEAVR+KA+MA
Sbjct: 636  ILIVNTIQKDLKSDNYLVVCAALNAVCKLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 695

Query: 296  LHRFYQRSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLYDLVSVDANSYKDLVVSIVSIL 117
            LHRFYQRSPSSV+HLVSNFRK+LCDNDPGVMGATLCPL+DL++VDANSYKDLV+S VSIL
Sbjct: 696  LHRFYQRSPSSVTHLVSNFRKKLCDNDPGVMGATLCPLFDLIAVDANSYKDLVISFVSIL 755

Query: 116  KQVAERRLPKAYDYHQMPAPFIQIKLLKILAVLGNGDK 3
            KQVAERRLPK YDYHQMPAPFIQI+LLKILA+LG+GD+
Sbjct: 756  KQVAERRLPKTYDYHQMPAPFIQIRLLKILALLGSGDR 793


>ref|XP_004162069.1| PREDICTED: AP-4 complex subunit epsilon-like [Cucumis sativus]
          Length = 975

 Score =  510 bits (1314), Expect = e-142
 Identities = 249/278 (89%), Positives = 274/278 (98%)
 Frame = -2

Query: 836 MEQLKTIGRELAMGSQGGYGQSKEFLDLIKSIGEARSKAEEDRIIVHDIETLKRRITEPD 657
           MEQLKTIGRELAMGSQGG+GQSKEFLDLIKSIGEARSKAEE+RII+H++ETLKRR+T+PD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60

Query: 656 IPKRKMKEYIIRLVYIEMLGHDASFGYIHAMKMTHDDSLVLKRTGYLAVTLFLNEDHDLI 477
           IPKRKMKEYIIRLVY+EMLGHDASFGYIHA+KMTHDD+L+LKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 476 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHAKEAVRRKAVMA 297
           ILIVNTIQKDLKSDNYL+VCAALNAVCRLINEETIPAVLPQVVELLGH+KEAVR+KA+MA
Sbjct: 121 ILIVNTIQKDLKSDNYLIVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180

Query: 296 LHRFYQRSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLYDLVSVDANSYKDLVVSIVSIL 117
           LHRF+Q+SPSS+SHL+SNFRKRLCDNDPGVMGATLCPL+DL++ D NS+KDLVVS VSIL
Sbjct: 181 LHRFHQKSPSSISHLLSNFRKRLCDNDPGVMGATLCPLFDLITSDVNSFKDLVVSFVSIL 240

Query: 116 KQVAERRLPKAYDYHQMPAPFIQIKLLKILAVLGNGDK 3
           KQVAERRLPK+YDYHQMPAPFIQIKLLKILA+LG GDK
Sbjct: 241 KQVAERRLPKSYDYHQMPAPFIQIKLLKILALLGAGDK 278


>ref|XP_004150249.1| PREDICTED: AP-4 complex subunit epsilon-like [Cucumis sativus]
          Length = 975

 Score =  510 bits (1314), Expect = e-142
 Identities = 249/278 (89%), Positives = 274/278 (98%)
 Frame = -2

Query: 836 MEQLKTIGRELAMGSQGGYGQSKEFLDLIKSIGEARSKAEEDRIIVHDIETLKRRITEPD 657
           MEQLKTIGRELAMGSQGG+GQSKEFLDLIKSIGEARSKAEE+RII+H++ETLKRR+T+PD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLIKSIGEARSKAEEERIIIHEMETLKRRLTDPD 60

Query: 656 IPKRKMKEYIIRLVYIEMLGHDASFGYIHAMKMTHDDSLVLKRTGYLAVTLFLNEDHDLI 477
           IPKRKMKEYIIRLVY+EMLGHDASFGYIHA+KMTHDD+L+LKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 476 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHAKEAVRRKAVMA 297
           ILIVNTIQKDLKSDNYL+VCAALNAVCRLINEETIPAVLPQVVELLGH+KEAVR+KA+MA
Sbjct: 121 ILIVNTIQKDLKSDNYLIVCAALNAVCRLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180

Query: 296 LHRFYQRSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLYDLVSVDANSYKDLVVSIVSIL 117
           LHRF+Q+SPSS+SHL+SNFRKRLCDNDPGVMGATLCPL+DL++ D NS+KDLVVS VSIL
Sbjct: 181 LHRFHQKSPSSISHLLSNFRKRLCDNDPGVMGATLCPLFDLITSDVNSFKDLVVSFVSIL 240

Query: 116 KQVAERRLPKAYDYHQMPAPFIQIKLLKILAVLGNGDK 3
           KQVAERRLPK+YDYHQMPAPFIQIKLLKILA+LG GDK
Sbjct: 241 KQVAERRLPKSYDYHQMPAPFIQIKLLKILALLGAGDK 278


>ref|XP_002519936.1| AP-1 complex subunit gamma-2, putative [Ricinus communis]
           gi|223540982|gb|EEF42540.1| AP-1 complex subunit
           gamma-2, putative [Ricinus communis]
          Length = 981

 Score =  510 bits (1314), Expect = e-142
 Identities = 250/278 (89%), Positives = 273/278 (98%)
 Frame = -2

Query: 836 MEQLKTIGRELAMGSQGGYGQSKEFLDLIKSIGEARSKAEEDRIIVHDIETLKRRITEPD 657
           MEQLKTIGRELAMGSQGG+GQSKEFLDL+KSIGEARSKAEEDRI++ +IETLK+RI EPD
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLSEIETLKKRIVEPD 60

Query: 656 IPKRKMKEYIIRLVYIEMLGHDASFGYIHAMKMTHDDSLVLKRTGYLAVTLFLNEDHDLI 477
           IPKRKMKEYIIRLVY+EMLGHDASFGYIHA+KMTHDD+L+LKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI 120

Query: 476 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHAKEAVRRKAVMA 297
           ILIVNTIQKDLKSDNYLVVCAALNAVC+LINEETIPAVLPQVVELLGH+KEAVR+KA+MA
Sbjct: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCKLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180

Query: 296 LHRFYQRSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLYDLVSVDANSYKDLVVSIVSIL 117
           LHRFY +SPSSVSHLVSNFRKRLCDNDPGVMGATLCPL+DL++VD NSYK+LVVS VSIL
Sbjct: 181 LHRFYHKSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLFDLITVDVNSYKELVVSFVSIL 240

Query: 116 KQVAERRLPKAYDYHQMPAPFIQIKLLKILAVLGNGDK 3
           KQVAERRLPK+YDYHQMPAPFIQIKLLKI+A+LG+GDK
Sbjct: 241 KQVAERRLPKSYDYHQMPAPFIQIKLLKIMALLGSGDK 278


>ref|XP_002328755.1| predicted protein [Populus trichocarpa] gi|222839053|gb|EEE77404.1|
           predicted protein [Populus trichocarpa]
          Length = 980

 Score =  505 bits (1301), Expect = e-141
 Identities = 247/278 (88%), Positives = 272/278 (97%)
 Frame = -2

Query: 836 MEQLKTIGRELAMGSQGGYGQSKEFLDLIKSIGEARSKAEEDRIIVHDIETLKRRITEPD 657
           MEQLKTIGRELAMGSQGG+GQSKEFLDL+KSIGEARSKAEEDRI++ +IE+LKRRI EP 
Sbjct: 1   MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLREIESLKRRIVEPG 60

Query: 656 IPKRKMKEYIIRLVYIEMLGHDASFGYIHAMKMTHDDSLVLKRTGYLAVTLFLNEDHDLI 477
           IPKRKMKEYIIRLVY+EMLGHDASFGYIHA+KMTHDD+LVLKRTGYLAVTLFLNEDHDLI
Sbjct: 61  IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLVLKRTGYLAVTLFLNEDHDLI 120

Query: 476 ILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVVELLGHAKEAVRRKAVMA 297
           ILIVNTIQKDLKSDNYLVVCAALNAVC+LINEETIPAVLPQVVELLGH+KEAVR+KA+MA
Sbjct: 121 ILIVNTIQKDLKSDNYLVVCAALNAVCKLINEETIPAVLPQVVELLGHSKEAVRKKAIMA 180

Query: 296 LHRFYQRSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLYDLVSVDANSYKDLVVSIVSIL 117
           LHRFY +SPSSVSHL+SNFRK+LCD+DPGVMGATLCPL+DL+++DANSYKDLVVS VSIL
Sbjct: 181 LHRFYHKSPSSVSHLLSNFRKKLCDSDPGVMGATLCPLFDLITIDANSYKDLVVSFVSIL 240

Query: 116 KQVAERRLPKAYDYHQMPAPFIQIKLLKILAVLGNGDK 3
           KQVAERRLPK YDYHQ+PAPFIQI+LLKILA+LG+GDK
Sbjct: 241 KQVAERRLPKVYDYHQLPAPFIQIRLLKILALLGSGDK 278


Top