BLASTX nr result

ID: Bupleurum21_contig00006470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006470
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|2...   319   5e-85
ref|XP_002326768.1| predicted protein [Populus trichocarpa] gi|2...   317   2e-84
ref|XP_002529265.1| 60S ribosomal protein L13, putative [Ricinus...   316   6e-84
ref|XP_004143667.1| PREDICTED: 60S ribosomal protein L13-1-like ...   315   1e-83
ref|XP_002519996.1| 60S ribosomal protein L13, putative [Ricinus...   315   1e-83

>ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|222857408|gb|EEE94955.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  319 bits (818), Expect = 5e-85
 Identities = 158/191 (82%), Positives = 165/191 (86%)
 Frame = -2

Query: 778 MKHNNVIPNGHFKKHWQNYIKTWFNQPARKTRRRNARQKKAVKTFPRPTAGPLRPIVHGQ 599
           +KHNNV+PNGHFKKHWQNY+KTWFNQPARKTRRR ARQKKAVK FPRPTAGPLRPIVHGQ
Sbjct: 2   VKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPIVHGQ 61

Query: 598 TLKYNMKVRAGRGFSXXXXXXXXXXXXXXPTIGIAVDHRRRNRSLEGLQANVQRLKTYKA 419
           TLKYNMKVRAGRGFS              PTIGIAVDHRRRNRSLEGLQANVQRLKTYKA
Sbjct: 62  TLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQANVQRLKTYKA 121

Query: 418 KLIVFPRRARKFNVGDSAPEELASATQVQGSYMPIVLEKPAVELVKVTAEMKSFNAYSKL 239
           KL+VFPRRARKF  GDSAPEELA+ATQVQG  MPIVLEKP VELVKVT EMKSF AY KL
Sbjct: 122 KLVVFPRRARKFKAGDSAPEELATATQVQGQIMPIVLEKPCVELVKVTEEMKSFRAYDKL 181

Query: 238 RAERTNERHLG 206
           R ERT+ RH+G
Sbjct: 182 RVERTSARHVG 192


>ref|XP_002326768.1| predicted protein [Populus trichocarpa] gi|222834090|gb|EEE72567.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  317 bits (813), Expect = 2e-84
 Identities = 157/191 (82%), Positives = 165/191 (86%)
 Frame = -2

Query: 778 MKHNNVIPNGHFKKHWQNYIKTWFNQPARKTRRRNARQKKAVKTFPRPTAGPLRPIVHGQ 599
           +KHNNV+PNGHFKKHWQNY+KTWFNQPARKTRRR ARQKKAVK FPRPTAGPLRPIVHGQ
Sbjct: 2   VKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPIVHGQ 61

Query: 598 TLKYNMKVRAGRGFSXXXXXXXXXXXXXXPTIGIAVDHRRRNRSLEGLQANVQRLKTYKA 419
           TLKYNMKVRAGRGFS              PTIGIAVDHRRRNRSLEGLQ NVQRLKTYKA
Sbjct: 62  TLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLKTYKA 121

Query: 418 KLIVFPRRARKFNVGDSAPEELASATQVQGSYMPIVLEKPAVELVKVTAEMKSFNAYSKL 239
           KL+VFPRRARK   GDSAPEELA+ATQVQG +MPIV EKP+VELVKVT EMKSF AY KL
Sbjct: 122 KLVVFPRRARKSKAGDSAPEELATATQVQGHFMPIVREKPSVELVKVTEEMKSFRAYDKL 181

Query: 238 RAERTNERHLG 206
           RAERTN RH+G
Sbjct: 182 RAERTNARHVG 192


>ref|XP_002529265.1| 60S ribosomal protein L13, putative [Ricinus communis]
           gi|223531254|gb|EEF33097.1| 60S ribosomal protein L13,
           putative [Ricinus communis]
          Length = 207

 Score =  316 bits (809), Expect = 6e-84
 Identities = 155/191 (81%), Positives = 165/191 (86%)
 Frame = -2

Query: 778 MKHNNVIPNGHFKKHWQNYIKTWFNQPARKTRRRNARQKKAVKTFPRPTAGPLRPIVHGQ 599
           +KHNNV+PNGHFKKHWQNY+KTWFNQPARKTRRR ARQKKAVK FPRPTAGPLRPIVHGQ
Sbjct: 2   VKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPIVHGQ 61

Query: 598 TLKYNMKVRAGRGFSXXXXXXXXXXXXXXPTIGIAVDHRRRNRSLEGLQANVQRLKTYKA 419
           TLKYNMK+RAGRGF+              PTIGIAVDHRR+NRSLEGLQANVQRLKTYKA
Sbjct: 62  TLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKA 121

Query: 418 KLIVFPRRARKFNVGDSAPEELASATQVQGSYMPIVLEKPAVELVKVTAEMKSFNAYSKL 239
           KL+VFPRRARK   GDSAPEELA+ATQVQG YMPIV EKP+VELVKVT EMKSF AY KL
Sbjct: 122 KLVVFPRRARKSKAGDSAPEELATATQVQGKYMPIVREKPSVELVKVTEEMKSFKAYDKL 181

Query: 238 RAERTNERHLG 206
           R ER N+RHLG
Sbjct: 182 RVERMNQRHLG 192


>ref|XP_004143667.1| PREDICTED: 60S ribosomal protein L13-1-like [Cucumis sativus]
           gi|449488615|ref|XP_004158113.1| PREDICTED: 60S
           ribosomal protein L13-1-like [Cucumis sativus]
          Length = 206

 Score =  315 bits (807), Expect = 1e-83
 Identities = 153/191 (80%), Positives = 165/191 (86%)
 Frame = -2

Query: 778 MKHNNVIPNGHFKKHWQNYIKTWFNQPARKTRRRNARQKKAVKTFPRPTAGPLRPIVHGQ 599
           MKHNNVIP+GHF+KHWQNY++TWFNQPARKTRRRNARQ+KAVK FPRPTAGPLRPIVHGQ
Sbjct: 1   MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKAFPRPTAGPLRPIVHGQ 60

Query: 598 TLKYNMKVRAGRGFSXXXXXXXXXXXXXXPTIGIAVDHRRRNRSLEGLQANVQRLKTYKA 419
           TLKYNMKVRAGRGFS              PTIGIAVDHRRRNRSLE LQANVQRLKTYKA
Sbjct: 61  TLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSLESLQANVQRLKTYKA 120

Query: 418 KLIVFPRRARKFNVGDSAPEELASATQVQGSYMPIVLEKPAVELVKVTAEMKSFNAYSKL 239
           K++VFPRRARKF  GDS PEELA+ATQVQGSYMPI LEKP+VELVK+T +MKSF AY KL
Sbjct: 121 KVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKPSVELVKITEDMKSFKAYDKL 180

Query: 238 RAERTNERHLG 206
           R ER N RH+G
Sbjct: 181 RVERANARHVG 191


>ref|XP_002519996.1| 60S ribosomal protein L13, putative [Ricinus communis]
           gi|223540760|gb|EEF42320.1| 60S ribosomal protein L13,
           putative [Ricinus communis]
          Length = 207

 Score =  315 bits (806), Expect = 1e-83
 Identities = 154/191 (80%), Positives = 164/191 (85%)
 Frame = -2

Query: 778 MKHNNVIPNGHFKKHWQNYIKTWFNQPARKTRRRNARQKKAVKTFPRPTAGPLRPIVHGQ 599
           +KHNNV+PNGHFKKHWQNY+KTWFNQPARKTRRR ARQKKAVK FPRPTAGPLRPIVHGQ
Sbjct: 2   VKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRAARQKKAVKIFPRPTAGPLRPIVHGQ 61

Query: 598 TLKYNMKVRAGRGFSXXXXXXXXXXXXXXPTIGIAVDHRRRNRSLEGLQANVQRLKTYKA 419
           TLKYNMK+RAGRGF+              PTIGIAVDHRR+NRSLEGLQANVQRLKTYKA
Sbjct: 62  TLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKA 121

Query: 418 KLIVFPRRARKFNVGDSAPEELASATQVQGSYMPIVLEKPAVELVKVTAEMKSFNAYSKL 239
           KL+VFPRRARKF  GDSA EELA+ATQVQG YMPI  EKP+VELVKVT EMKSF AY KL
Sbjct: 122 KLVVFPRRARKFKAGDSAAEELATATQVQGQYMPIAREKPSVELVKVTEEMKSFKAYDKL 181

Query: 238 RAERTNERHLG 206
           R ER N+RHLG
Sbjct: 182 RVERMNQRHLG 192


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