BLASTX nr result

ID: Bupleurum21_contig00006449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006449
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528866.1| PREDICTED: remorin-like [Glycine max]              82   4e-14
ref|XP_002511833.1| Remorin, putative [Ricinus communis] gi|2235...    79   4e-13
gb|AFK34355.1| unknown [Medicago truncatula]                           79   5e-13
ref|XP_003521134.1| PREDICTED: remorin-like [Glycine max]              78   9e-13
ref|NP_001234231.1| remorin 1 [Solanum lycopersicum] gi|4731573|...    77   1e-12

>ref|XP_003528866.1| PREDICTED: remorin-like [Glycine max]
          Length = 198

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 47/95 (49%), Positives = 54/95 (56%)
 Frame = -1

Query: 285 KAWEESEKTKVENKAQKQLAAVNSWENSQXXXXXXXXXXXXXXXXXXXXXXXXXXKNKTA 106
           KAWEESEK+K ENKAQKQL+AV +WENS+                          KNK A
Sbjct: 94  KAWEESEKSKAENKAQKQLSAVAAWENSKKAALEAQLRKIEEQLEKKKAEYGEKMKNKIA 153

Query: 105 MIHKAAEEKRAMVEAQRGXXXXXXXXXXXKHRATG 1
           ++HK AEEKRAMVEA+RG           KHRATG
Sbjct: 154 LVHKQAEEKRAMVEAKRGEEILKAEEIAAKHRATG 188


>ref|XP_002511833.1| Remorin, putative [Ricinus communis] gi|223549013|gb|EEF50502.1|
           Remorin, putative [Ricinus communis]
          Length = 188

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/95 (46%), Positives = 54/95 (56%)
 Frame = -1

Query: 285 KAWEESEKTKVENKAQKQLAAVNSWENSQXXXXXXXXXXXXXXXXXXXXXXXXXXKNKTA 106
           KAWE+SEK+K ENKAQK+L++V +WENS+                          KNK A
Sbjct: 84  KAWEDSEKSKAENKAQKKLSSVTAWENSKKAALEAKLRKIEEQLEKKKAEYAEKMKNKVA 143

Query: 105 MIHKAAEEKRAMVEAQRGXXXXXXXXXXXKHRATG 1
           ++HK AEEKRAMVEAQRG           K+RATG
Sbjct: 144 LVHKQAEEKRAMVEAQRGEEVLKAEEMAAKYRATG 178


>gb|AFK34355.1| unknown [Medicago truncatula]
          Length = 200

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 45/95 (47%), Positives = 51/95 (53%)
 Frame = -1

Query: 285 KAWEESEKTKVENKAQKQLAAVNSWENSQXXXXXXXXXXXXXXXXXXXXXXXXXXKNKTA 106
           KAWE+SEKTK ENKAQKQL+ V +WENS+                          KNK A
Sbjct: 96  KAWEDSEKTKAENKAQKQLSTVAAWENSKKAALEAQLRKIEEQLEKKKAEYGEKIKNKVA 155

Query: 105 MIHKAAEEKRAMVEAQRGXXXXXXXXXXXKHRATG 1
           M+HK AEEKRA+VEAQR            KH ATG
Sbjct: 156 MVHKQAEEKRAIVEAQRAEAILKAEEIAAKHNATG 190


>ref|XP_003521134.1| PREDICTED: remorin-like [Glycine max]
          Length = 200

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 44/95 (46%), Positives = 52/95 (54%)
 Frame = -1

Query: 285 KAWEESEKTKVENKAQKQLAAVNSWENSQXXXXXXXXXXXXXXXXXXXXXXXXXXKNKTA 106
           KAWEESEK+K ENKA+K L+AV +WENS+                          KNK  
Sbjct: 96  KAWEESEKSKAENKAEKHLSAVAAWENSKIAALEAQLRKIEEQMEKKKAEYGEKMKNKIV 155

Query: 105 MIHKAAEEKRAMVEAQRGXXXXXXXXXXXKHRATG 1
           ++HK AEEKRAMVEA+RG           KHRATG
Sbjct: 156 LVHKQAEEKRAMVEAKRGEEILKAEEIAAKHRATG 190


>ref|NP_001234231.1| remorin 1 [Solanum lycopersicum]
           gi|4731573|gb|AAD28506.1|AF123265_1 remorin 1 [Solanum
           lycopersicum]
          Length = 197

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/95 (44%), Positives = 54/95 (56%)
 Frame = -1

Query: 285 KAWEESEKTKVENKAQKQLAAVNSWENSQXXXXXXXXXXXXXXXXXXXXXXXXXXKNKTA 106
           KAWEESEK+K ENKAQK+++A+ +WENS+                          KNK A
Sbjct: 93  KAWEESEKSKAENKAQKKVSAIGAWENSKKANLESELKKMEEQLEKKKAIYTEKMKNKIA 152

Query: 105 MIHKAAEEKRAMVEAQRGXXXXXXXXXXXKHRATG 1
           ++HK AEEKRAM+EA+RG           K+RATG
Sbjct: 153 LLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATG 187


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