BLASTX nr result

ID: Bupleurum21_contig00006446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006446
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ84042.1| pectate lyase [Malus x domestica]                      577   e-162
gb|AEN70981.1| pectate lyase [Gossypium davidsonii] gi|345104321...   572   e-161
gb|AAM12784.1| putative pectate-lyase [Capsicum annuum]               570   e-160
gb|AEN70977.1| pectate lyase [Gossypium hirsutum subsp. latifolium]   570   e-160
gb|AEN70964.1| pectate lyase [Gossypium laxum] gi|345104323|gb|A...   570   e-160

>gb|AAQ84042.1| pectate lyase [Malus x domestica]
          Length = 418

 Score =  577 bits (1486), Expect = e-162
 Identities = 266/296 (89%), Positives = 283/296 (95%), Gaps = 2/296 (0%)
 Frame = +2

Query: 53  QDPDLVVHEVQKNIN--ASRRNLGFFSCGTGNPIDDCWRCNPNWAKNRQRLADCAIGFGK 226
           QDP+LVV EVQ+NI+   SRRNLG+ SCGTGNPIDDCWRC+PNW KNRQ LADCAIGFGK
Sbjct: 39  QDPELVVQEVQRNISDSVSRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQSLADCAIGFGK 98

Query: 227 NAIGGRDGKIYVVTDSGDDNPVAPKPGTLRHAVIQNEPLWIIFQRDMVIKLKEELIMNSF 406
           NAIGGRDGKIYVVTDSGDD+PV PKPGTLRHAVIQ+EPLWIIFQRDM I+LKEELIMNSF
Sbjct: 99  NAIGGRDGKIYVVTDSGDDDPVNPKPGTLRHAVIQDEPLWIIFQRDMTIQLKEELIMNSF 158

Query: 407 KTIDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKQGGNAMVRSSPRHFGWRTLSDGD 586
           KTIDGRGASVHIAGGPCITIQFVTNIIIHG++IHDCKQGGNAMVRSSPRHFGWRT+SDGD
Sbjct: 159 KTIDGRGASVHIAGGPCITIQFVTNIIIHGLHIHDCKQGGNAMVRSSPRHFGWRTVSDGD 218

Query: 587 GVSIFGGSHVWIDHCSLSNCQDGLIDAVMGSTAITISNNYMTHHDKVMLLGHSDTYEKDK 766
           GVSIFGGSHVW+DHCSLSNC+DGL+DA+ GSTAITISNNYMTHHDKVMLLGHSD+Y  DK
Sbjct: 219 GVSIFGGSHVWVDHCSLSNCKDGLVDAIYGSTAITISNNYMTHHDKVMLLGHSDSYTNDK 278

Query: 767 NMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNR 934
           NMQ+TIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNR
Sbjct: 279 NMQITIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNR 334


>gb|AEN70981.1| pectate lyase [Gossypium davidsonii] gi|345104321|gb|AEN70982.1|
           pectate lyase [Gossypium klotzschianum]
          Length = 411

 Score =  572 bits (1474), Expect = e-161
 Identities = 262/294 (89%), Positives = 282/294 (95%)
 Frame = +2

Query: 53  QDPDLVVHEVQKNINASRRNLGFFSCGTGNPIDDCWRCNPNWAKNRQRLADCAIGFGKNA 232
           QDP+LVV +VQ+ INASRRNLG+ SCGTGNPIDDCWRC+PNW  NRQ+LADCAIGFGKNA
Sbjct: 34  QDPELVVQDVQRAINASRRNLGYLSCGTGNPIDDCWRCDPNWETNRQKLADCAIGFGKNA 93

Query: 233 IGGRDGKIYVVTDSGDDNPVAPKPGTLRHAVIQNEPLWIIFQRDMVIKLKEELIMNSFKT 412
           IGGRDGKIYVVTDSGDD+PV PKPGTLRHAVIQ+EPLWIIF RDM I+LKEELIMNSFKT
Sbjct: 94  IGGRDGKIYVVTDSGDDDPVNPKPGTLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFKT 153

Query: 413 IDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKQGGNAMVRSSPRHFGWRTLSDGDGV 592
           IDGRGASVHIAGGPCIT+Q+VTNIIIHG+NIHDCKQGGNAMVR SPRH+GWRT+SDGDGV
Sbjct: 154 IDGRGASVHIAGGPCITVQYVTNIIIHGLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGV 213

Query: 593 SIFGGSHVWIDHCSLSNCQDGLIDAVMGSTAITISNNYMTHHDKVMLLGHSDTYEKDKNM 772
           SIFGGSHVW+DH SLSNC+DGLIDA+ GSTAITISNNYMTHHDKVMLLGHSD+Y +DKNM
Sbjct: 214 SIFGGSHVWVDHNSLSNCKDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNM 273

Query: 773 QVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNR 934
           QVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA+PTINSQGNR
Sbjct: 274 QVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNR 327


>gb|AAM12784.1| putative pectate-lyase [Capsicum annuum]
          Length = 324

 Score =  570 bits (1470), Expect = e-160
 Identities = 261/293 (89%), Positives = 279/293 (95%)
 Frame = +2

Query: 56  DPDLVVHEVQKNINASRRNLGFFSCGTGNPIDDCWRCNPNWAKNRQRLADCAIGFGKNAI 235
           +P  VV EV ++IN SRRNLG+ SCGTGNPIDDCWRC+PNW KNRQRLADCAIGFGKNAI
Sbjct: 26  NPQQVVDEVHRSINGSRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAI 85

Query: 236 GGRDGKIYVVTDSGDDNPVAPKPGTLRHAVIQNEPLWIIFQRDMVIKLKEELIMNSFKTI 415
           GGRDGKIYVVTDSGDD+PV PKPGTLRHAVIQ EPLWIIF RDMVI+LKEELIMNSFKTI
Sbjct: 86  GGRDGKIYVVTDSGDDDPVTPKPGTLRHAVIQTEPLWIIFARDMVIQLKEELIMNSFKTI 145

Query: 416 DGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKQGGNAMVRSSPRHFGWRTLSDGDGVS 595
           DGRGASVHIAGGPCITIQ+VTNIIIHGI+IHDCKQGGNAMVRSSP H+GWRT+SDGDGVS
Sbjct: 146 DGRGASVHIAGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPSHYGWRTISDGDGVS 205

Query: 596 IFGGSHVWIDHCSLSNCQDGLIDAVMGSTAITISNNYMTHHDKVMLLGHSDTYEKDKNMQ 775
           IFGGSHVW+DHCS S+C+DGLIDA+MGSTAITISNNYMTHHDKVMLLGHSD+Y +DKNMQ
Sbjct: 206 IFGGSHVWVDHCSFSSCKDGLIDAIMGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQ 265

Query: 776 VTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNR 934
           +TIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNR
Sbjct: 266 ITIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNR 318


>gb|AEN70977.1| pectate lyase [Gossypium hirsutum subsp. latifolium]
          Length = 411

 Score =  570 bits (1469), Expect = e-160
 Identities = 261/294 (88%), Positives = 281/294 (95%)
 Frame = +2

Query: 53  QDPDLVVHEVQKNINASRRNLGFFSCGTGNPIDDCWRCNPNWAKNRQRLADCAIGFGKNA 232
           QDP+LVV +V + INASRRNLG+ SCGTGNPIDDCWRC+PNW  NRQ+LADCAIGFGKNA
Sbjct: 34  QDPELVVQDVHRAINASRRNLGYLSCGTGNPIDDCWRCDPNWETNRQKLADCAIGFGKNA 93

Query: 233 IGGRDGKIYVVTDSGDDNPVAPKPGTLRHAVIQNEPLWIIFQRDMVIKLKEELIMNSFKT 412
           IGGRDGKIYVVTDSGDD+PV PKPGTLRHAVIQ+EPLWIIF RDM I+LKEELIMNSFKT
Sbjct: 94  IGGRDGKIYVVTDSGDDDPVNPKPGTLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFKT 153

Query: 413 IDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKQGGNAMVRSSPRHFGWRTLSDGDGV 592
           IDGRGASVHIAGGPCIT+Q+VTNIIIHG+NIHDCKQGGNAMVR SPRH+GWRT+SDGDGV
Sbjct: 154 IDGRGASVHIAGGPCITVQYVTNIIIHGLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGV 213

Query: 593 SIFGGSHVWIDHCSLSNCQDGLIDAVMGSTAITISNNYMTHHDKVMLLGHSDTYEKDKNM 772
           SIFGGSHVW+DH SLSNC+DGLIDA+ GSTAITISNNYMTHHDKVMLLGHSD+Y +DKNM
Sbjct: 214 SIFGGSHVWVDHNSLSNCKDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNM 273

Query: 773 QVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNR 934
           QVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA+PTINSQGNR
Sbjct: 274 QVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNR 327


>gb|AEN70964.1| pectate lyase [Gossypium laxum] gi|345104323|gb|AEN70983.1| pectate
           lyase [Gossypium aridum]
          Length = 411

 Score =  570 bits (1469), Expect = e-160
 Identities = 261/294 (88%), Positives = 281/294 (95%)
 Frame = +2

Query: 53  QDPDLVVHEVQKNINASRRNLGFFSCGTGNPIDDCWRCNPNWAKNRQRLADCAIGFGKNA 232
           QDP+LVV +V + INASRRNLG+ SCGTGNPIDDCWRC+PNW  NRQ+LADCAIGFGKNA
Sbjct: 34  QDPELVVQDVHRAINASRRNLGYLSCGTGNPIDDCWRCDPNWETNRQKLADCAIGFGKNA 93

Query: 233 IGGRDGKIYVVTDSGDDNPVAPKPGTLRHAVIQNEPLWIIFQRDMVIKLKEELIMNSFKT 412
           IGGRDGKIYVVTDSGDD+PV PKPGTLRHAVIQ+EPLWIIF RDM I+LKEELIMNSFKT
Sbjct: 94  IGGRDGKIYVVTDSGDDDPVNPKPGTLRHAVIQDEPLWIIFARDMTIQLKEELIMNSFKT 153

Query: 413 IDGRGASVHIAGGPCITIQFVTNIIIHGINIHDCKQGGNAMVRSSPRHFGWRTLSDGDGV 592
           IDGRGASVHIAGGPCIT+Q+VTNIIIHG+NIHDCKQGGNAMVR SPRH+GWRT+SDGDGV
Sbjct: 154 IDGRGASVHIAGGPCITVQYVTNIIIHGLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGV 213

Query: 593 SIFGGSHVWIDHCSLSNCQDGLIDAVMGSTAITISNNYMTHHDKVMLLGHSDTYEKDKNM 772
           SIFGGSHVW+DH SLSNC+DGLIDA+ GSTAITISNNYMTHHDKVMLLGHSD+Y +DKNM
Sbjct: 214 SIFGGSHVWVDHNSLSNCKDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNM 273

Query: 773 QVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNR 934
           QVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA+PTINSQGNR
Sbjct: 274 QVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNR 327


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