BLASTX nr result

ID: Bupleurum21_contig00006419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006419
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat...   215   3e-54
emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]   215   3e-54
ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat...   210   9e-53
ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containi...   210   1e-52
ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containi...   210   1e-52

>ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Vitis vinifera]
          Length = 622

 Score =  215 bits (548), Expect = 3e-54
 Identities = 101/114 (88%), Positives = 111/114 (97%)
 Frame = +2

Query: 2   AVWALIDEMRRENPQLITPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCL 181
           AVWALI+EMRRENPQ ++P VF+VLMRRFASARMVKKA+EVLDEMPKYGCEPDE+VFGCL
Sbjct: 140 AVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCL 199

Query: 182 LDALAKNGSVKEAASLFEDMRIRFTPTIKHFTSLLYGWCKEGKLMEAKFVLVQM 343
           LDAL KNGSVKEAASLFEDMRIRFTPT+KHFTSLLYGWC+EGKLMEAK+VLVQ+
Sbjct: 200 LDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQI 253


>emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
          Length = 655

 Score =  215 bits (548), Expect = 3e-54
 Identities = 101/114 (88%), Positives = 111/114 (97%)
 Frame = +2

Query: 2   AVWALIDEMRRENPQLITPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCL 181
           AVWALI+EMRRENPQ ++P VF+VLMRRFASARMVKKA+EVLDEMPKYGCEPDE+VFGCL
Sbjct: 173 AVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCL 232

Query: 182 LDALAKNGSVKEAASLFEDMRIRFTPTIKHFTSLLYGWCKEGKLMEAKFVLVQM 343
           LDAL KNGSVKEAASLFEDMRIRFTPT+KHFTSLLYGWC+EGKLMEAK+VLVQ+
Sbjct: 233 LDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQI 286


>ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Glycine max]
          Length = 654

 Score =  210 bits (535), Expect = 9e-53
 Identities = 100/114 (87%), Positives = 108/114 (94%)
 Frame = +2

Query: 2   AVWALIDEMRRENPQLITPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCL 181
           AVWALI+EMR+ENP LITP+VF++LMRRFASARMV KAVEVLDEMPKYGCEPDEYVFGCL
Sbjct: 174 AVWALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVEVLDEMPKYGCEPDEYVFGCL 233

Query: 182 LDALAKNGSVKEAASLFEDMRIRFTPTIKHFTSLLYGWCKEGKLMEAKFVLVQM 343
           LDAL KNGSVKEAASLFEDMR R+ P++KHFTSLLYGWCKEGKLMEAK VLVQM
Sbjct: 234 LDALCKNGSVKEAASLFEDMRYRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQM 287


>ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 664

 Score =  210 bits (534), Expect = 1e-52
 Identities = 98/114 (85%), Positives = 108/114 (94%)
 Frame = +2

Query: 2   AVWALIDEMRRENPQLITPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCL 181
           AVWALI+EMR+ENP ++TPEVFIVLMRRFAS RMVKKAVEVLDEMPKYGCEPDEYVFGCL
Sbjct: 182 AVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCL 241

Query: 182 LDALAKNGSVKEAASLFEDMRIRFTPTIKHFTSLLYGWCKEGKLMEAKFVLVQM 343
           LDAL KNGSVKEAASLFEDMR+RF P ++HFTSLLYGWC+EGK+MEAK VLVQ+
Sbjct: 242 LDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQI 295


>ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 641

 Score =  210 bits (534), Expect = 1e-52
 Identities = 98/114 (85%), Positives = 108/114 (94%)
 Frame = +2

Query: 2   AVWALIDEMRRENPQLITPEVFIVLMRRFASARMVKKAVEVLDEMPKYGCEPDEYVFGCL 181
           AVWALI+EMR+ENP ++TPEVFIVLMRRFAS RMVKKAVEVLDEMPKYGCEPDEYVFGCL
Sbjct: 159 AVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCL 218

Query: 182 LDALAKNGSVKEAASLFEDMRIRFTPTIKHFTSLLYGWCKEGKLMEAKFVLVQM 343
           LDAL KNGSVKEAASLFEDMR+RF P ++HFTSLLYGWC+EGK+MEAK VLVQ+
Sbjct: 219 LDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQI 272


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