BLASTX nr result

ID: Bupleurum21_contig00006410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006410
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266270.2| PREDICTED: tRNA-specific adenosine deaminase...   174   2e-41
ref|XP_002521753.1| hydrolase, putative [Ricinus communis] gi|22...   169   6e-40
ref|XP_003541956.1| PREDICTED: tRNA-specific adenosine deaminase...   166   4e-39
emb|CBI16992.3| unnamed protein product [Vitis vinifera]              166   5e-39
ref|XP_003630759.1| tRNA-specific adenosine deaminase-like prote...   155   5e-36

>ref|XP_002266270.2| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like
           [Vitis vinifera]
          Length = 433

 Score =  174 bits (440), Expect = 2e-41
 Identities = 103/223 (46%), Positives = 130/223 (58%), Gaps = 5/223 (2%)
 Frame = +1

Query: 1   CKLWPTSYHPPTYNINGITGFSEEDSQSILEFMKFTVDLAKSVGDQIVNAAVIVNPTSNQ 180
           CKLWPTSYHPPTYNI GI GFSEEDSQS+  FMK  V LAKS   Q+VNAAVIV+P   Q
Sbjct: 123 CKLWPTSYHPPTYNIEGIAGFSEEDSQSVFSFMKSAVKLAKSDDGQVVNAAVIVDPLVKQ 182

Query: 181 VVASSCDQVFFPNNLSKRNSTGADPQKPCETKSLLSKISGLQSYTTSTSNSSHDEHK-TY 357
           ++ S+CD++   +    + S  A   +  +  +    ++G+ S+ T  S    DE K  Y
Sbjct: 183 IIVSACDEICSWHTPMDKTSVEASCLEQPDIATSQGVVNGVVSHETLLSKGPPDEPKQLY 242

Query: 358 DFVSCLHPWMWADKQSQSCFSGHPFHHAAVTAINNSAARDRELFPASEHIDDRCQSEYMD 537
             VSCL+PW WA+ QS +    HP  HAAV AI  SAARDR LFP    I +  QS  +D
Sbjct: 243 TGVSCLYPWRWAEHQSHASSYWHPLRHAAVVAIEYSAARDRRLFPGLGQIGN--QSNQLD 300

Query: 538 Y---PSTVSPSKRQKTD-TNVEDSGIQNGGFDVCGSAPVRPYL 654
           +    S  S +KRQKT+   VED    +   +   S   RPYL
Sbjct: 301 HTLSASISSQAKRQKTNLKKVEDVEKLDAHCNGFHSDAARPYL 343


>ref|XP_002521753.1| hydrolase, putative [Ricinus communis] gi|223538966|gb|EEF40563.1|
           hydrolase, putative [Ricinus communis]
          Length = 423

 Score =  169 bits (427), Expect = 6e-40
 Identities = 95/207 (45%), Positives = 126/207 (60%), Gaps = 9/207 (4%)
 Frame = +1

Query: 1   CKLWPTSYHPPTYNINGITGFSEEDSQSILEFMKFTVDLAKSVGDQIVNAAVIVNPTSNQ 180
           CK WPTS+HPPTYNI+GI GF EEDSQS+  FMK  +DLAKS    +VNAAVIV+P+  Q
Sbjct: 124 CKFWPTSFHPPTYNIDGIAGFDEEDSQSVFNFMKVAIDLAKSGDGSVVNAAVIVDPSVQQ 183

Query: 181 VVASSCDQVF---FPNNLSKRNSTGADPQKPCETKSLLSKISGLQSYTTSTSNSSHDEHK 351
           ++AS CD++F    P N +     G   Q P  T   +     + S+      + HD  +
Sbjct: 184 IIASGCDKIFSWHVPTN-NSHTENGHFKQPPPFTS--IPDSYAVASHIPMFPKNLHDRPE 240

Query: 352 TYDF-VSCLHPWMWADKQ---SQSCFSGHPFHHAAVTAINNSAARDRELFPASEHIDDR- 516
             DF VSCL+PW W+ +Q   + SC+  HP  HA V AI +SA RDR +FP  +H  ++ 
Sbjct: 241 RLDFSVSCLNPWQWSGQQLDMTSSCYC-HPLQHACVVAIASSAERDRLMFPGLDHTGEKY 299

Query: 517 CQSEYMDYPSTVSPSKRQKTD-TNVED 594
            ++E M   S  SP+KRQKT+  NVED
Sbjct: 300 LEAELMQSSSAGSPAKRQKTNLANVED 326


>ref|XP_003541956.1| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like
           [Glycine max]
          Length = 470

 Score =  166 bits (420), Expect = 4e-39
 Identities = 102/223 (45%), Positives = 134/223 (60%), Gaps = 5/223 (2%)
 Frame = +1

Query: 1   CKLWPTSYHPPTYNINGITGFSEEDSQSILEFMKFTVDLAKSVGDQIVNAAVIVNPTSNQ 180
           CK WPTSYHP TYNI+GITGFSEEDSQS+L+FM+  V++A S G  +VNAAVIV+P++ Q
Sbjct: 180 CKFWPTSYHPRTYNIDGITGFSEEDSQSVLKFMQSAVEMATSDG-MVVNAAVIVDPSAKQ 238

Query: 181 VVASSCDQVFFPNNLSKRNSTGADPQKPCETKSLLSKISGLQSYTTSTSNSSHDEHK-TY 357
           +++S+CDQ+F  N     N      +KP  + S     S    +    SNSS ++ K +Y
Sbjct: 239 IISSACDQIFSWNTCKDNNCY----RKPELSSSHPISSSRCNPHEPLHSNSSSNQLKQSY 294

Query: 358 DFVSCLHPWMWADKQ--SQSCFSGHPFHHAAVTAINNSAARDRELFPASEHIDDRCQSEY 531
             V+CL+P  W ++Q  SQS +  HP  HAA+ AI +SAARDR LF +  + +DR     
Sbjct: 295 TDVACLYPRQWTEQQSHSQSSYYWHPLRHAAIVAIESSAARDRYLFSSEGNSEDRYLELD 354

Query: 532 MDYPS-TVSPSKRQKT-DTNVEDSGIQNGGFDVCGSAPVRPYL 654
            D  S T SP+KRQKT   N ED    N           RPYL
Sbjct: 355 SDNSSWTSSPAKRQKTVCANGEDDDRLNAHSQTSDQPLARPYL 397


>emb|CBI16992.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  166 bits (419), Expect = 5e-39
 Identities = 103/223 (46%), Positives = 125/223 (56%), Gaps = 5/223 (2%)
 Frame = +1

Query: 1   CKLWPTSYHPPTYNINGITGFSEEDSQSILEFMKFTVDLAKSVGDQIVNAAVIVNPTSNQ 180
           CKLWPTSYHPPTYNI GI GFSEEDSQS+  FMK  V LAKS   Q+VNAAVIV+P   Q
Sbjct: 123 CKLWPTSYHPPTYNIEGIAGFSEEDSQSVFSFMKSAVKLAKSDDGQVVNAAVIVDPLVKQ 182

Query: 181 VVASSCDQVFFPNNLSKRNSTGADPQKPCETKSLLSKISGLQSYTTSTSNSSHDEHK-TY 357
           ++ S+CD++   +    + S  A               S L+    +TS    DE K  Y
Sbjct: 183 IIVSACDEICSWHTPMDKTSVEA---------------SCLEQPDIATSQGPPDEPKQLY 227

Query: 358 DFVSCLHPWMWADKQSQSCFSGHPFHHAAVTAINNSAARDRELFPASEHIDDRCQSEYMD 537
             VSCL+PW WA+ QS +    HP  HAAV AI  SAARDR LFP    I +  QS  +D
Sbjct: 228 TGVSCLYPWRWAEHQSHASSYWHPLRHAAVVAIEYSAARDRRLFPGLGQIGN--QSNQLD 285

Query: 538 Y---PSTVSPSKRQKTD-TNVEDSGIQNGGFDVCGSAPVRPYL 654
           +    S  S +KRQKT+   VED    +   +   S   RPYL
Sbjct: 286 HTLSASISSQAKRQKTNLKKVEDVEKLDAHCNGFHSDAARPYL 328


>ref|XP_003630759.1| tRNA-specific adenosine deaminase-like protein [Medicago
           truncatula] gi|355524781|gb|AET05235.1| tRNA-specific
           adenosine deaminase-like protein [Medicago truncatula]
          Length = 388

 Score =  155 bits (393), Expect = 5e-36
 Identities = 91/203 (44%), Positives = 123/203 (60%), Gaps = 11/203 (5%)
 Frame = +1

Query: 1   CKLWPTSYHPPTYNINGITGFSEEDSQSILEFMKFTVDLAKSVGDQIVNAAVIVNPTSNQ 180
           CK WPTSYHP TY+I GITGFS+EDSQS+L+FM+  V+LA S G  +VNAAVIV+P++ Q
Sbjct: 86  CKFWPTSYHPRTYSIEGITGFSKEDSQSVLKFMQSAVELATSDG-LVVNAAVIVDPSAKQ 144

Query: 181 VVASSCDQVFFPNNLSKRNSTGADPQKPCETKSLLSKISGLQSYTTSTS---------NS 333
           +V+++ D VF  N              PC+  S   K     + + S S         +S
Sbjct: 145 IVSTARDLVFAWN--------------PCKDDSCYRKPDLFSAQSISNSLDPEKPLHLSS 190

Query: 334 SHDEHKTYDFVSCLHPWMWADKQ--SQSCFSGHPFHHAAVTAINNSAARDRELFPASEHI 507
            +   ++Y  V+CL+PW WA++Q  SQS +  HP  HAA+ AI +SAARDR LFP +E  
Sbjct: 191 CNHLKQSYRSVACLYPWQWAEQQSHSQSSYYCHPLRHAAIVAIESSAARDRHLFPNNEGS 250

Query: 508 DDRCQSEYMDYPSTVSPSKRQKT 576
            ++      + PST SP KRQKT
Sbjct: 251 REKYLELDHESPSTSSPLKRQKT 273


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