BLASTX nr result
ID: Bupleurum21_contig00006402
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00006402 (1573 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera] 98 1e-31 ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 98 1e-31 ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 102 9e-31 ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|2... 92 3e-29 ref|XP_003532920.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 93 5e-28 >emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera] Length = 592 Score = 98.2 bits (243), Expect(2) = 1e-31 Identities = 49/77 (63%), Positives = 58/77 (75%) Frame = -2 Query: 1572 SRGLDIPTVDLVLNYDIPRFPKDYVHXXXXXXXXXXXGLSVSFVTQNDVDLFLRIEADLD 1393 SRGLDIPTVDLV+NYDIPR+P+DYVH GLS+S VTQNDVDL IEA L Sbjct: 459 SRGLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLG 518 Query: 1392 KKLEKFECKENEVISDI 1342 K+L+KF+CKE EV+ +I Sbjct: 519 KQLDKFDCKEKEVLDNI 535 Score = 66.6 bits (161), Expect(2) = 1e-31 Identities = 31/42 (73%), Positives = 38/42 (90%) Frame = -3 Query: 1277 EVISDITKVYKARRVATMKLLDDGFEDKAKERKSQKLRMLEE 1152 EV+ +ITKVYKARRVATMK++DDGFE+KAK RK+QKL+ L E Sbjct: 530 EVLDNITKVYKARRVATMKMMDDGFEEKAKARKAQKLKTLAE 571 >ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis vinifera] gi|297736137|emb|CBI24175.3| unnamed protein product [Vitis vinifera] Length = 489 Score = 98.2 bits (243), Expect(2) = 1e-31 Identities = 49/77 (63%), Positives = 58/77 (75%) Frame = -2 Query: 1572 SRGLDIPTVDLVLNYDIPRFPKDYVHXXXXXXXXXXXGLSVSFVTQNDVDLFLRIEADLD 1393 SRGLDIPTVDLV+NYDIPR+P+DYVH GLS+S VTQNDVDL IEA L Sbjct: 356 SRGLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLG 415 Query: 1392 KKLEKFECKENEVISDI 1342 K+L+KF+CKE EV+ +I Sbjct: 416 KQLDKFDCKEKEVLDNI 432 Score = 66.6 bits (161), Expect(2) = 1e-31 Identities = 31/42 (73%), Positives = 38/42 (90%) Frame = -3 Query: 1277 EVISDITKVYKARRVATMKLLDDGFEDKAKERKSQKLRMLEE 1152 EV+ +ITKVYKARRVATMK++DDGFE+KAK RK+QKL+ L E Sbjct: 427 EVLDNITKVYKARRVATMKMMDDGFEEKAKARKAQKLKTLAE 468 >ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis sativus] gi|449475871|ref|XP_004154575.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis sativus] Length = 491 Score = 102 bits (253), Expect(2) = 9e-31 Identities = 51/77 (66%), Positives = 59/77 (76%) Frame = -2 Query: 1572 SRGLDIPTVDLVLNYDIPRFPKDYVHXXXXXXXXXXXGLSVSFVTQNDVDLFLRIEADLD 1393 SRGLDIPTVDLV+NYDIPRFP+DYVH GL+VSF+TQNDV L IEA+L Sbjct: 361 SRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEANLG 420 Query: 1392 KKLEKFECKENEVISDI 1342 K+LE FECKENEV+ +I Sbjct: 421 KQLEIFECKENEVLENI 437 Score = 59.7 bits (143), Expect(2) = 9e-31 Identities = 28/43 (65%), Positives = 34/43 (79%) Frame = -3 Query: 1280 NEVISDITKVYKARRVATMKLLDDGFEDKAKERKSQKLRMLEE 1152 NEV+ +ITKVYKAR VA MK++D GFE+K KERK QK + L E Sbjct: 431 NEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAE 473 >ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|222851113|gb|EEE88660.1| predicted protein [Populus trichocarpa] Length = 496 Score = 92.4 bits (228), Expect(2) = 3e-29 Identities = 47/77 (61%), Positives = 55/77 (71%) Frame = -2 Query: 1572 SRGLDIPTVDLVLNYDIPRFPKDYVHXXXXXXXXXXXGLSVSFVTQNDVDLFLRIEADLD 1393 SRGLDIPTVDLV+NYD+PR P DYVH GL+VS V Q+D L IEA++ Sbjct: 366 SRGLDIPTVDLVINYDLPRDPTDYVHRVGRTARAGREGLAVSLVAQHDGKLMKAIEAEVG 425 Query: 1392 KKLEKFECKENEVISDI 1342 K+ EKFECKENEV+SDI Sbjct: 426 KQFEKFECKENEVLSDI 442 Score = 64.3 bits (155), Expect(2) = 3e-29 Identities = 30/43 (69%), Positives = 36/43 (83%) Frame = -3 Query: 1280 NEVISDITKVYKARRVATMKLLDDGFEDKAKERKSQKLRMLEE 1152 NEV+SDITKVYKARRVA MK++DDGF++ KERK QK + L E Sbjct: 436 NEVLSDITKVYKARRVAKMKMMDDGFDELVKERKKQKQKSLAE 478 >ref|XP_003532920.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine max] Length = 587 Score = 93.2 bits (230), Expect(2) = 5e-28 Identities = 46/75 (61%), Positives = 56/75 (74%) Frame = -2 Query: 1572 SRGLDIPTVDLVLNYDIPRFPKDYVHXXXXXXXXXXXGLSVSFVTQNDVDLFLRIEADLD 1393 SRGLDIPTVDLV+NYD+PRFP+DY+H GL++S VTQNDVDL IEA ++ Sbjct: 367 SRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVDLIHEIEALIE 426 Query: 1392 KKLEKFECKENEVIS 1348 K+LE E KENEV+S Sbjct: 427 KQLEMIEYKENEVLS 441 Score = 59.3 bits (142), Expect(2) = 5e-28 Identities = 27/43 (62%), Positives = 36/43 (83%) Frame = -3 Query: 1280 NEVISDITKVYKARRVATMKLLDDGFEDKAKERKSQKLRMLEE 1152 NEV+S + KV+ A+ VA MK++DDGFE+KAKERK QKL+ML + Sbjct: 437 NEVLSLMKKVFSAKNVAEMKMIDDGFEEKAKERKKQKLKMLAD 479