BLASTX nr result

ID: Bupleurum21_contig00006402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006402
         (1573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]    98   1e-31
ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helica...    98   1e-31
ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   102   9e-31
ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-29
ref|XP_003532920.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    93   5e-28

>emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
          Length = 592

 Score = 98.2 bits (243), Expect(2) = 1e-31
 Identities = 49/77 (63%), Positives = 58/77 (75%)
 Frame = -2

Query: 1572 SRGLDIPTVDLVLNYDIPRFPKDYVHXXXXXXXXXXXGLSVSFVTQNDVDLFLRIEADLD 1393
            SRGLDIPTVDLV+NYDIPR+P+DYVH           GLS+S VTQNDVDL   IEA L 
Sbjct: 459  SRGLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLG 518

Query: 1392 KKLEKFECKENEVISDI 1342
            K+L+KF+CKE EV+ +I
Sbjct: 519  KQLDKFDCKEKEVLDNI 535



 Score = 66.6 bits (161), Expect(2) = 1e-31
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = -3

Query: 1277 EVISDITKVYKARRVATMKLLDDGFEDKAKERKSQKLRMLEE 1152
            EV+ +ITKVYKARRVATMK++DDGFE+KAK RK+QKL+ L E
Sbjct: 530  EVLDNITKVYKARRVATMKMMDDGFEEKAKARKAQKLKTLAE 571


>ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
            vinifera] gi|297736137|emb|CBI24175.3| unnamed protein
            product [Vitis vinifera]
          Length = 489

 Score = 98.2 bits (243), Expect(2) = 1e-31
 Identities = 49/77 (63%), Positives = 58/77 (75%)
 Frame = -2

Query: 1572 SRGLDIPTVDLVLNYDIPRFPKDYVHXXXXXXXXXXXGLSVSFVTQNDVDLFLRIEADLD 1393
            SRGLDIPTVDLV+NYDIPR+P+DYVH           GLS+S VTQNDVDL   IEA L 
Sbjct: 356  SRGLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVLG 415

Query: 1392 KKLEKFECKENEVISDI 1342
            K+L+KF+CKE EV+ +I
Sbjct: 416  KQLDKFDCKEKEVLDNI 432



 Score = 66.6 bits (161), Expect(2) = 1e-31
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = -3

Query: 1277 EVISDITKVYKARRVATMKLLDDGFEDKAKERKSQKLRMLEE 1152
            EV+ +ITKVYKARRVATMK++DDGFE+KAK RK+QKL+ L E
Sbjct: 427  EVLDNITKVYKARRVATMKMMDDGFEEKAKARKAQKLKTLAE 468


>ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
            sativus] gi|449475871|ref|XP_004154575.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
            sativus]
          Length = 491

 Score =  102 bits (253), Expect(2) = 9e-31
 Identities = 51/77 (66%), Positives = 59/77 (76%)
 Frame = -2

Query: 1572 SRGLDIPTVDLVLNYDIPRFPKDYVHXXXXXXXXXXXGLSVSFVTQNDVDLFLRIEADLD 1393
            SRGLDIPTVDLV+NYDIPRFP+DYVH           GL+VSF+TQNDV L   IEA+L 
Sbjct: 361  SRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQNDVHLIHEIEANLG 420

Query: 1392 KKLEKFECKENEVISDI 1342
            K+LE FECKENEV+ +I
Sbjct: 421  KQLEIFECKENEVLENI 437



 Score = 59.7 bits (143), Expect(2) = 9e-31
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -3

Query: 1280 NEVISDITKVYKARRVATMKLLDDGFEDKAKERKSQKLRMLEE 1152
            NEV+ +ITKVYKAR VA MK++D GFE+K KERK QK + L E
Sbjct: 431  NEVLENITKVYKARHVAKMKMVDGGFEEKVKERKKQKRKTLAE 473


>ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|222851113|gb|EEE88660.1|
            predicted protein [Populus trichocarpa]
          Length = 496

 Score = 92.4 bits (228), Expect(2) = 3e-29
 Identities = 47/77 (61%), Positives = 55/77 (71%)
 Frame = -2

Query: 1572 SRGLDIPTVDLVLNYDIPRFPKDYVHXXXXXXXXXXXGLSVSFVTQNDVDLFLRIEADLD 1393
            SRGLDIPTVDLV+NYD+PR P DYVH           GL+VS V Q+D  L   IEA++ 
Sbjct: 366  SRGLDIPTVDLVINYDLPRDPTDYVHRVGRTARAGREGLAVSLVAQHDGKLMKAIEAEVG 425

Query: 1392 KKLEKFECKENEVISDI 1342
            K+ EKFECKENEV+SDI
Sbjct: 426  KQFEKFECKENEVLSDI 442



 Score = 64.3 bits (155), Expect(2) = 3e-29
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = -3

Query: 1280 NEVISDITKVYKARRVATMKLLDDGFEDKAKERKSQKLRMLEE 1152
            NEV+SDITKVYKARRVA MK++DDGF++  KERK QK + L E
Sbjct: 436  NEVLSDITKVYKARRVAKMKMMDDGFDELVKERKKQKQKSLAE 478


>ref|XP_003532920.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine max]
          Length = 587

 Score = 93.2 bits (230), Expect(2) = 5e-28
 Identities = 46/75 (61%), Positives = 56/75 (74%)
 Frame = -2

Query: 1572 SRGLDIPTVDLVLNYDIPRFPKDYVHXXXXXXXXXXXGLSVSFVTQNDVDLFLRIEADLD 1393
            SRGLDIPTVDLV+NYD+PRFP+DY+H           GL++S VTQNDVDL   IEA ++
Sbjct: 367  SRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVDLIHEIEALIE 426

Query: 1392 KKLEKFECKENEVIS 1348
            K+LE  E KENEV+S
Sbjct: 427  KQLEMIEYKENEVLS 441



 Score = 59.3 bits (142), Expect(2) = 5e-28
 Identities = 27/43 (62%), Positives = 36/43 (83%)
 Frame = -3

Query: 1280 NEVISDITKVYKARRVATMKLLDDGFEDKAKERKSQKLRMLEE 1152
            NEV+S + KV+ A+ VA MK++DDGFE+KAKERK QKL+ML +
Sbjct: 437  NEVLSLMKKVFSAKNVAEMKMIDDGFEEKAKERKKQKLKMLAD 479


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