BLASTX nr result

ID: Bupleurum21_contig00006383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006383
         (1011 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285375.1| PREDICTED: reticulon family protein-like [Vi...   222   1e-55
ref|XP_004140714.1| PREDICTED: reticulon-like protein B11-like [...   218   2e-54
ref|XP_004157344.1| PREDICTED: LOW QUALITY PROTEIN: reticulon-li...   216   5e-54
ref|XP_003555964.1| PREDICTED: uncharacterized protein LOC100527...   213   5e-53
ref|XP_002518680.1| Reticulon-3, putative [Ricinus communis] gi|...   212   1e-52

>ref|XP_002285375.1| PREDICTED: reticulon family protein-like [Vitis vinifera]
           gi|296090446|emb|CBI40265.3| unnamed protein product
           [Vitis vinifera]
          Length = 207

 Score =  222 bits (566), Expect = 1e-55
 Identities = 113/207 (54%), Positives = 143/207 (69%), Gaps = 3/207 (1%)
 Frame = -2

Query: 932 MGDSP---RSSVHLALGGDAVADVLLWKNWIGGLILLVSSTVFWLLFEKLGYNXXXXXXX 762
           MG+S    R SVH ALGG +VAD LLW+ W G  + LVS++  W LFE+ GYN       
Sbjct: 1   MGESDHPSRISVHQALGGGSVADFLLWRRWCGAAVCLVSASSLWFLFERAGYNLLSFVAN 60

Query: 761 XXXXXXXXXXFWAKSASILNRXXXXXXXXDVSEDAFLSVAEVMCVWGNRALAVARDIAIG 582
                      WAKSASILNR        ++SE++ +  A+V+ VW N AL+VARDIA+G
Sbjct: 61  VVLLLVVILFLWAKSASILNRPLPPLPDMEISEESVVKAADVIRVWINYALSVARDIAVG 120

Query: 581 GDMKVLLQVVSTLWLISVIGSFFNFLTLVYIGVLLSLSVPLLYEKYQDQIDDKLIIAHKV 402
            ++K+ LQV   LW++S IGS FNFLTLVYIGV+LSLSVP+LY+KYQD IDDKL + H+V
Sbjct: 121 RNVKLFLQVAFGLWVVSYIGSLFNFLTLVYIGVVLSLSVPVLYDKYQDHIDDKLRVTHRV 180

Query: 401 IQTQYKKVDEMVLRKIPFPKNKEKKTQ 321
           +QTQYKK+D+ +LRKIP P N  KKTQ
Sbjct: 181 VQTQYKKIDDKILRKIPMPINMGKKTQ 207


>ref|XP_004140714.1| PREDICTED: reticulon-like protein B11-like [Cucumis sativus]
          Length = 207

 Score =  218 bits (554), Expect = 2e-54
 Identities = 112/201 (55%), Positives = 137/201 (68%)
 Frame = -2

Query: 923 SPRSSVHLALGGDAVADVLLWKNWIGGLILLVSSTVFWLLFEKLGYNXXXXXXXXXXXXX 744
           S R SVH ALGG  VADVLLWK W GG+++L S+T  W LFE+ GYN             
Sbjct: 7   SRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLLV 66

Query: 743 XXXXFWAKSASILNRXXXXXXXXDVSEDAFLSVAEVMCVWGNRALAVARDIAIGGDMKVL 564
               FWAKSAS+LNR        ++SE++   VA  +    N AL++ARDIAIG ++K+ 
Sbjct: 67  IILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKLF 126

Query: 563 LQVVSTLWLISVIGSFFNFLTLVYIGVLLSLSVPLLYEKYQDQIDDKLIIAHKVIQTQYK 384
           LQV   LW++S IGSFFNFLTLVYIGVLLSLS P++Y+KYQD ID+KL + H+  Q QYK
Sbjct: 127 LQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYK 186

Query: 383 KVDEMVLRKIPFPKNKEKKTQ 321
           K+DE VLRKIP P NKEKK Q
Sbjct: 187 KLDENVLRKIPLPLNKEKKMQ 207


>ref|XP_004157344.1| PREDICTED: LOW QUALITY PROTEIN: reticulon-like protein B11-like
           [Cucumis sativus]
          Length = 207

 Score =  216 bits (551), Expect = 5e-54
 Identities = 112/201 (55%), Positives = 138/201 (68%)
 Frame = -2

Query: 923 SPRSSVHLALGGDAVADVLLWKNWIGGLILLVSSTVFWLLFEKLGYNXXXXXXXXXXXXX 744
           S R SVH ALGG  VADVLLWK W GG+++L S+T  W LFE+ GYN             
Sbjct: 7   SRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLLV 66

Query: 743 XXXXFWAKSASILNRXXXXXXXXDVSEDAFLSVAEVMCVWGNRALAVARDIAIGGDMKVL 564
               FWAKSAS+LNR        ++SE++   VA  +    N AL++ARDIAIG ++K+ 
Sbjct: 67  IIXFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKLF 126

Query: 563 LQVVSTLWLISVIGSFFNFLTLVYIGVLLSLSVPLLYEKYQDQIDDKLIIAHKVIQTQYK 384
           LQV   LW++S IGSFFNFLTLVYIGVLLSLS P++Y+KYQD ID+KL + H+  Q QY+
Sbjct: 127 LQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYR 186

Query: 383 KVDEMVLRKIPFPKNKEKKTQ 321
           K+DE VLRKIP P NKEKK Q
Sbjct: 187 KLDENVLRKIPLPLNKEKKMQ 207


>ref|XP_003555964.1| PREDICTED: uncharacterized protein LOC100527029 [Glycine max]
          Length = 204

 Score =  213 bits (543), Expect = 5e-53
 Identities = 110/204 (53%), Positives = 138/204 (67%)
 Frame = -2

Query: 932 MGDSPRSSVHLALGGDAVADVLLWKNWIGGLILLVSSTVFWLLFEKLGYNXXXXXXXXXX 753
           MGDS R SVH  LG   VADV+LWKNW G + +LVS+T  W LFE+ GYN          
Sbjct: 1   MGDSNRISVHRVLGEGLVADVVLWKNWRGAVAVLVSATTLWYLFERAGYNFLSFVANVVL 60

Query: 752 XXXXXXXFWAKSASILNRXXXXXXXXDVSEDAFLSVAEVMCVWGNRALAVARDIAIGGDM 573
                  FWAK+A++LNR        ++SE+    VA+ + +W NRAL+VA DIAI  ++
Sbjct: 61  LLVAILFFWAKAANLLNRPLPPLPDLEISEETIARVADALQIWLNRALSVAHDIAIERNL 120

Query: 572 KVLLQVVSTLWLISVIGSFFNFLTLVYIGVLLSLSVPLLYEKYQDQIDDKLIIAHKVIQT 393
            + LQVV  LW+IS IGS FNFLTL+YIGVLLSLS+P+LY+KYQDQ+D +L + H VIQT
Sbjct: 121 LLCLQVVGVLWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQVDGRLGVIHGVIQT 180

Query: 392 QYKKVDEMVLRKIPFPKNKEKKTQ 321
           QYKK+  +VL KIP   NKEKK Q
Sbjct: 181 QYKKIHSIVLSKIPKLSNKEKKVQ 204


>ref|XP_002518680.1| Reticulon-3, putative [Ricinus communis]
           gi|223542061|gb|EEF43605.1| Reticulon-3, putative
           [Ricinus communis]
          Length = 207

 Score =  212 bits (540), Expect = 1e-52
 Identities = 108/207 (52%), Positives = 141/207 (68%), Gaps = 3/207 (1%)
 Frame = -2

Query: 932 MGDS---PRSSVHLALGGDAVADVLLWKNWIGGLILLVSSTVFWLLFEKLGYNXXXXXXX 762
           MG+S    R SVH  LGG +VADVLLWK W   + ++V +T  W+LFE+ GYN       
Sbjct: 1   MGESIPPRRISVHQCLGGGSVADVLLWKKWCSSVTIVVGATSLWMLFEQAGYNFLSFVAN 60

Query: 761 XXXXXXXXXXFWAKSASILNRXXXXXXXXDVSEDAFLSVAEVMCVWGNRALAVARDIAIG 582
                     FWAKSAS+LNR        ++SE+  + VA V+ V+ N AL++ARDIAIG
Sbjct: 61  VLFLLLAILFFWAKSASLLNRPLPPLPDLEISEETIVKVAGVIQVYANIALSIARDIAIG 120

Query: 581 GDMKVLLQVVSTLWLISVIGSFFNFLTLVYIGVLLSLSVPLLYEKYQDQIDDKLIIAHKV 402
            ++K+ LQV   LW++S IGS  NFLTL+YIG+LLS SVP+LY+KYQ  ID+KL + HK+
Sbjct: 121 RNLKLFLQVAFGLWIVSYIGSLCNFLTLLYIGILLSFSVPVLYDKYQHHIDEKLSVTHKI 180

Query: 401 IQTQYKKVDEMVLRKIPFPKNKEKKTQ 321
           IQTQY+K+D+  L+KIPFP NKEKK Q
Sbjct: 181 IQTQYRKIDDSFLKKIPFPLNKEKKIQ 207


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