BLASTX nr result

ID: Bupleurum21_contig00006374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006374
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [...   120   2e-25
emb|CBI16589.3| unnamed protein product [Vitis vinifera]              120   2e-25
ref|XP_002511647.1| DNA binding protein, putative [Ricinus commu...   118   7e-25
ref|XP_002320711.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [...   108   5e-22

>ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
          Length = 465

 Score =  120 bits (300), Expect = 2e-25
 Identities = 69/146 (47%), Positives = 86/146 (58%), Gaps = 16/146 (10%)
 Frame = +3

Query: 111 MSQCVPGWDLDDN-----MKLNSQSNSLYRTPDIPTSNYEVAELTWANGQLSMHGLGQPR 275
           MSQCVP WD+DDN     + L S SNS    PD+P  +YEVAELTW NGQL+MHGLGQPR
Sbjct: 1   MSQCVPSWDIDDNPTPPRLFLRSHSNST--APDVPMLDYEVAELTWENGQLAMHGLGQPR 58

Query: 276 LQS--------NTNMWEKPCLGGTLESIVDQATFFPSYK---VAENNDLVPWFNNHKSIM 422
           + +        +   WEKP  GGTLESIV+QAT  P +K      N+DLVPW ++ +++ 
Sbjct: 59  VPAKPVASAAVSKYPWEKPRAGGTLESIVNQATRLPHHKPPPEGANDDLVPWLDHQRAVA 118

Query: 423 NXXXXXXXXXXXXXXXGVMDALVPCT 500
                             MDALVPC+
Sbjct: 119 AAAAAASVAM-------TMDALVPCS 137


>emb|CBI16589.3| unnamed protein product [Vitis vinifera]
          Length = 278

 Score =  120 bits (300), Expect = 2e-25
 Identities = 69/146 (47%), Positives = 86/146 (58%), Gaps = 16/146 (10%)
 Frame = +3

Query: 111 MSQCVPGWDLDDN-----MKLNSQSNSLYRTPDIPTSNYEVAELTWANGQLSMHGLGQPR 275
           MSQCVP WD+DDN     + L S SNS    PD+P  +YEVAELTW NGQL+MHGLGQPR
Sbjct: 1   MSQCVPSWDIDDNPTPPRLFLRSHSNST--APDVPMLDYEVAELTWENGQLAMHGLGQPR 58

Query: 276 LQS--------NTNMWEKPCLGGTLESIVDQATFFPSYK---VAENNDLVPWFNNHKSIM 422
           + +        +   WEKP  GGTLESIV+QAT  P +K      N+DLVPW ++ +++ 
Sbjct: 59  VPAKPVASAAVSKYPWEKPRAGGTLESIVNQATRLPHHKPPPEGANDDLVPWLDHQRAVA 118

Query: 423 NXXXXXXXXXXXXXXXGVMDALVPCT 500
                             MDALVPC+
Sbjct: 119 AAAAAASVAM-------TMDALVPCS 137


>ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
           gi|223548827|gb|EEF50316.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 465

 Score =  118 bits (295), Expect = 7e-25
 Identities = 69/148 (46%), Positives = 81/148 (54%), Gaps = 18/148 (12%)
 Frame = +3

Query: 111 MSQCVPGWDLDDN----MKLNSQSNSLYRTPDIPTSNYEVAELTWANGQLSMHGLGQPRL 278
           M+QCVP WDL+DN     K + +SNS    PD+P  +YEVAELTW NGQLSMHGLG PRL
Sbjct: 1   MTQCVPSWDLEDNPSPAAKHSFRSNSNSSAPDVPMLDYEVAELTWENGQLSMHGLGPPRL 60

Query: 279 QSNT--------NMWEKPCLGGTLESIVDQATFFPSYKVAEN------NDLVPWFNNHKS 416
              T          WEKP  GGTLESIV+QAT  P  +  +N      N++VPW  +H  
Sbjct: 61  PVKTIPSSSPSKYTWEKPRAGGTLESIVNQATRLPQQRKTDNITGYGSNEVVPWLGHH-- 118

Query: 417 IMNXXXXXXXXXXXXXXXGVMDALVPCT 500
                               MDALVPCT
Sbjct: 119 ------HHHHRAATSSPTMTMDALVPCT 140


>ref|XP_002320711.1| predicted protein [Populus trichocarpa] gi|222861484|gb|EEE99026.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  110 bits (274), Expect = 2e-22
 Identities = 62/147 (42%), Positives = 83/147 (56%), Gaps = 19/147 (12%)
 Frame = +3

Query: 117 QCVPGWDLDDNM----KLNSQSNSLYRTPDIPTSNYEVAELTWANGQLSMHGLGQPRLQS 284
           QCVP W++DDN     KL+ + +S    PD+P  +YEVAELTW NGQ++MHGLG PR+ +
Sbjct: 4   QCVPSWEVDDNRTTAPKLSLRFHSNSSAPDMPMLDYEVAELTWENGQIAMHGLGPPRVPA 63

Query: 285 --------NTNMWEKPCLGGTLESIVDQATFFPSYKVA-------ENNDLVPWFNNHKSI 419
                   +   W+KP   GTLESIV+QAT  P    A        ++DL+PWFN+HK+ 
Sbjct: 64  KPIASTSPSKYTWDKPRASGTLESIVNQATCVPQCNKATFDNSTGSDHDLIPWFNHHKAS 123

Query: 420 MNXXXXXXXXXXXXXXXGVMDALVPCT 500
            +                 MDALVPC+
Sbjct: 124 ASATM-------------TMDALVPCS 137


>ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
          Length = 459

 Score =  108 bits (270), Expect = 5e-22
 Identities = 65/153 (42%), Positives = 81/153 (52%), Gaps = 23/153 (15%)
 Frame = +3

Query: 111 MSQCVPGWDLDDN---MKLNSQSNSLYRTPDIPTSNYEVAELTWANGQLSMHGLGQPRL- 278
           MSQCVP WD++DN    +++ +SNS    PD+P  +YEVAELTW NGQLSMHGLG PR+ 
Sbjct: 1   MSQCVPSWDVEDNPPPSRVSLRSNSNSTAPDVPMLDYEVAELTWENGQLSMHGLGLPRVP 60

Query: 279 ------QSNTNMWEKPCLGGTLESIVDQATFFPSYKVAE-------------NNDLVPWF 401
                  +N   WEKP   GTLESIV+QAT F   +                 N +VPWF
Sbjct: 61  VKPPTAATNKYTWEKPRGSGTLESIVNQATSFSHQEKPRPLNGDSGGGGGVYGNFMVPWF 120

Query: 402 NNHKSIMNXXXXXXXXXXXXXXXGVMDALVPCT 500
           + H +                    MDALVPC+
Sbjct: 121 DPHAAATTTTTTTNTM--------TMDALVPCS 145


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