BLASTX nr result

ID: Bupleurum21_contig00006371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006371
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310827.1| predicted protein [Populus trichocarpa] gi|2...   174   1e-71
ref|NP_001050906.1| Os03g0681400 [Oryza sativa Japonica Group] g...   172   1e-71
ref|XP_003612100.1| Ubiquitin carrier protein [Medicago truncatu...   171   2e-71
ref|XP_003579038.1| PREDICTED: probable ubiquitin-conjugating en...   176   1e-70
ref|XP_002274933.1| PREDICTED: probable ubiquitin-conjugating en...   170   2e-70

>ref|XP_002310827.1| predicted protein [Populus trichocarpa] gi|222853730|gb|EEE91277.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  174 bits (442), Expect(2) = 1e-71
 Identities = 78/81 (96%), Positives = 81/81 (100%)
 Frame = -1

Query: 425 IFLNPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCLSILSMLSSSPAKQRPEDNDRYV 246
           IFL+PAPLHPHIYSNGHICLDILYDSWSPAMTVSSVC+SILSMLSSSPAKQRPEDNDRYV
Sbjct: 81  IFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPAKQRPEDNDRYV 140

Query: 245 RNCRNGRSPKETRWWFHDDKV 183
           +NCRNGRSPKETRWWFHDDKV
Sbjct: 141 KNCRNGRSPKETRWWFHDDKV 161



 Score =  122 bits (305), Expect(2) = 1e-71
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = -3

Query: 735 MTTSSASSRKILSKIACNRLQKELVEWQMNPPSGFKHKVTDNLQRWVIEVGGASGTLYAD 556
           MT+SSA++RK LSKIACNRLQKELVEWQ+NPP+GFKHKVTDNLQRWVIEV GA GTLYA+
Sbjct: 1   MTSSSATTRKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVIGAPGTLYAN 60

Query: 555 ETYQLQV 535
           ETYQLQV
Sbjct: 61  ETYQLQV 67


>ref|NP_001050906.1| Os03g0681400 [Oryza sativa Japonica Group]
           gi|57164486|gb|AAK00965.2|AC079736_5 putative
           ubiquitin-conjugating enzyme E2 [Oryza sativa Japonica
           Group] gi|108710422|gb|ABF98217.1| Ubiquitin-conjugating
           enzyme family protein, expressed [Oryza sativa Japonica
           Group] gi|113549377|dbj|BAF12820.1| Os03g0681400 [Oryza
           sativa Japonica Group] gi|215737341|dbj|BAG96270.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222625566|gb|EEE59698.1| hypothetical protein
           OsJ_12122 [Oryza sativa Japonica Group]
          Length = 161

 Score =  172 bits (437), Expect(2) = 1e-71
 Identities = 77/81 (95%), Positives = 80/81 (98%)
 Frame = -1

Query: 425 IFLNPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCLSILSMLSSSPAKQRPEDNDRYV 246
           IFL+PAP+HPHIYSNGHICLDILYDSWSPAMTVSSVC+SILSMLSSSPAKQRP DNDRYV
Sbjct: 81  IFLHPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPAKQRPADNDRYV 140

Query: 245 RNCRNGRSPKETRWWFHDDKV 183
           RNCRNGRSPKETRWWFHDDKV
Sbjct: 141 RNCRNGRSPKETRWWFHDDKV 161



 Score =  124 bits (310), Expect(2) = 1e-71
 Identities = 58/67 (86%), Positives = 63/67 (94%)
 Frame = -3

Query: 735 MTTSSASSRKILSKIACNRLQKELVEWQMNPPSGFKHKVTDNLQRWVIEVGGASGTLYAD 556
           MT+SS+ SRK+LSKIACNRLQKEL EWQ+NPPSGFKHKVTDNLQRWVIEV GA+GTLYA 
Sbjct: 1   MTSSSSPSRKVLSKIACNRLQKELAEWQVNPPSGFKHKVTDNLQRWVIEVAGAAGTLYAG 60

Query: 555 ETYQLQV 535
           ETYQLQV
Sbjct: 61  ETYQLQV 67


>ref|XP_003612100.1| Ubiquitin carrier protein [Medicago truncatula]
           gi|355513435|gb|AES95058.1| Ubiquitin carrier protein
           [Medicago truncatula] gi|388496074|gb|AFK36103.1|
           unknown [Medicago truncatula]
          Length = 161

 Score =  171 bits (433), Expect(2) = 2e-71
 Identities = 76/81 (93%), Positives = 80/81 (98%)
 Frame = -1

Query: 425 IFLNPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCLSILSMLSSSPAKQRPEDNDRYV 246
           IFL+PAPLHPHIYSNGHICLDILYDSWSPAMTVSS+C+SILSMLSSS AKQRPEDNDRYV
Sbjct: 81  IFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTAKQRPEDNDRYV 140

Query: 245 RNCRNGRSPKETRWWFHDDKV 183
           +NCRNGRSPKETRWWFHDDKV
Sbjct: 141 KNCRNGRSPKETRWWFHDDKV 161



 Score =  124 bits (312), Expect(2) = 2e-71
 Identities = 58/67 (86%), Positives = 65/67 (97%)
 Frame = -3

Query: 735 MTTSSASSRKILSKIACNRLQKELVEWQMNPPSGFKHKVTDNLQRWVIEVGGASGTLYAD 556
           MT+SSA+SRK LSKIACNRLQKELVEWQ+NPP+GFKH+VTDNLQRWVIEVGGA GTLY++
Sbjct: 1   MTSSSAASRKTLSKIACNRLQKELVEWQVNPPTGFKHRVTDNLQRWVIEVGGAPGTLYSN 60

Query: 555 ETYQLQV 535
           ETYQLQV
Sbjct: 61  ETYQLQV 67


>ref|XP_003579038.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 18-like
           [Brachypodium distachyon]
          Length = 161

 Score =  176 bits (445), Expect(2) = 1e-70
 Identities = 78/81 (96%), Positives = 81/81 (100%)
 Frame = -1

Query: 425 IFLNPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCLSILSMLSSSPAKQRPEDNDRYV 246
           IFLNPAP+HPHIYSNGHICLDILYDSWSPAMTVSSVC+SILSMLSSSPAKQRP+DNDRYV
Sbjct: 81  IFLNPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPAKQRPQDNDRYV 140

Query: 245 RNCRNGRSPKETRWWFHDDKV 183
           RNCRNGRSPKETRWWFHDDKV
Sbjct: 141 RNCRNGRSPKETRWWFHDDKV 161



 Score =  117 bits (294), Expect(2) = 1e-70
 Identities = 55/67 (82%), Positives = 62/67 (92%)
 Frame = -3

Query: 735 MTTSSASSRKILSKIACNRLQKELVEWQMNPPSGFKHKVTDNLQRWVIEVGGASGTLYAD 556
           MT+SS +SRK LSKIACNRLQKEL EWQ+ PP+GFK+KV+DNLQRWVIEVGGA+GTLYA 
Sbjct: 1   MTSSSTASRKALSKIACNRLQKELAEWQVGPPAGFKYKVSDNLQRWVIEVGGAAGTLYAG 60

Query: 555 ETYQLQV 535
           ETYQLQV
Sbjct: 61  ETYQLQV 67


>ref|XP_002274933.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Vitis
           vinifera] gi|297735076|emb|CBI17438.3| unnamed protein
           product [Vitis vinifera]
          Length = 161

 Score =  170 bits (431), Expect(2) = 2e-70
 Identities = 76/81 (93%), Positives = 78/81 (96%)
 Frame = -1

Query: 425 IFLNPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCLSILSMLSSSPAKQRPEDNDRYV 246
           IFL PAPLHPHIYSNGHICLDILYDSWSPAMTVSS+C+SILSMLSSS  KQRPEDNDRYV
Sbjct: 81  IFLQPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTVKQRPEDNDRYV 140

Query: 245 RNCRNGRSPKETRWWFHDDKV 183
           RNCRNGRSPKETRWWFHDDKV
Sbjct: 141 RNCRNGRSPKETRWWFHDDKV 161



 Score =  122 bits (306), Expect(2) = 2e-70
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = -3

Query: 735 MTTSSASSRKILSKIACNRLQKELVEWQMNPPSGFKHKVTDNLQRWVIEVGGASGTLYAD 556
           MT+SSA+SRK LSKIACNRLQKELVEWQ+NPP+GFKHKVTDNLQRWVIEV GA GTLYA+
Sbjct: 1   MTSSSATSRKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVHGAPGTLYAN 60

Query: 555 ETYQLQV 535
           E+YQLQV
Sbjct: 61  ESYQLQV 67


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