BLASTX nr result

ID: Bupleurum21_contig00006331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006331
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322713.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_002308954.1| predicted protein [Populus trichocarpa] gi|1...   123   2e-26
ref|XP_003525227.1| PREDICTED: 40S ribosomal protein S2-4-like [...   120   9e-26
ref|XP_003630949.1| 40S ribosomal protein S2 [Medicago truncatul...   120   1e-25
ref|XP_003538262.1| PREDICTED: 40S ribosomal protein S2-4-like [...   120   2e-25

>ref|XP_002322713.1| predicted protein [Populus trichocarpa] gi|222867343|gb|EEF04474.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/62 (90%), Positives = 60/62 (96%)
 Frame = -2

Query: 188 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWRETRFTKSPYQEYTDLLAKPAS 9
           IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFW+ETRF +SP+QEYTDLLAKP S
Sbjct: 207 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWKETRFIRSPFQEYTDLLAKPTS 266

Query: 8   KI 3
           K+
Sbjct: 267 KV 268



 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/52 (98%), Positives = 52/52 (100%)
 Frame = -1

Query: 471 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 316
           KEVATAIRGAIILAKLS+IPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV
Sbjct: 133 KEVATAIRGAIILAKLSIIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 184


>ref|XP_002308954.1| predicted protein [Populus trichocarpa] gi|118485149|gb|ABK94437.1|
           unknown [Populus trichocarpa]
           gi|222854930|gb|EEE92477.1| predicted protein [Populus
           trichocarpa]
          Length = 270

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/62 (90%), Positives = 60/62 (96%)
 Frame = -2

Query: 188 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWRETRFTKSPYQEYTDLLAKPAS 9
           IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFW+ETRF +SP+QEYTDLLAKP S
Sbjct: 201 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWKETRFIRSPFQEYTDLLAKPTS 260

Query: 8   KI 3
           K+
Sbjct: 261 KV 262



 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/52 (98%), Positives = 52/52 (100%)
 Frame = -1

Query: 471 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 316
           KEVATAIRGAIILAKLS+IPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV
Sbjct: 127 KEVATAIRGAIILAKLSIIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 178


>ref|XP_003525227.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max]
          Length = 272

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/61 (90%), Positives = 59/61 (96%)
 Frame = -2

Query: 188 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWRETRFTKSPYQEYTDLLAKPAS 9
           IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTP+FW+ETRF+KSP+QEYTDLLAKP  
Sbjct: 201 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTG 260

Query: 8   K 6
           K
Sbjct: 261 K 261



 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/52 (100%), Positives = 52/52 (100%)
 Frame = -1

Query: 471 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 316
           KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV
Sbjct: 127 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 178


>ref|XP_003630949.1| 40S ribosomal protein S2 [Medicago truncatula]
           gi|355524971|gb|AET05425.1| 40S ribosomal protein S2
           [Medicago truncatula]
          Length = 279

 Score =  120 bits (301), Expect = 1e-25
 Identities = 54/61 (88%), Positives = 60/61 (98%)
 Frame = -2

Query: 188 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWRETRFTKSPYQEYTDLLAKPAS 9
           IDDVFTSSRGSTKTLGNFVKATFDCL+KTYGFLTP+FW+ETRF+KSP+QEYTDLLAKP +
Sbjct: 208 IDDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTA 267

Query: 8   K 6
           K
Sbjct: 268 K 268



 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/52 (100%), Positives = 52/52 (100%)
 Frame = -1

Query: 471 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 316
           KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV
Sbjct: 134 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 185


>ref|XP_003538262.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max]
          Length = 275

 Score =  120 bits (300), Expect = 2e-25
 Identities = 54/61 (88%), Positives = 59/61 (96%)
 Frame = -2

Query: 188 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWRETRFTKSPYQEYTDLLAKPAS 9
           IDDVFTSSRGSTKTLGNFVKATFDCL+KTYGFLTP+FW+ETRF+KSP+QEYTDLLAKP  
Sbjct: 204 IDDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTG 263

Query: 8   K 6
           K
Sbjct: 264 K 264



 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/52 (100%), Positives = 52/52 (100%)
 Frame = -1

Query: 471 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 316
           KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV
Sbjct: 130 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 181


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