BLASTX nr result
ID: Bupleurum21_contig00006331
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00006331 (471 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002322713.1| predicted protein [Populus trichocarpa] gi|2... 123 2e-26 ref|XP_002308954.1| predicted protein [Populus trichocarpa] gi|1... 123 2e-26 ref|XP_003525227.1| PREDICTED: 40S ribosomal protein S2-4-like [... 120 9e-26 ref|XP_003630949.1| 40S ribosomal protein S2 [Medicago truncatul... 120 1e-25 ref|XP_003538262.1| PREDICTED: 40S ribosomal protein S2-4-like [... 120 2e-25 >ref|XP_002322713.1| predicted protein [Populus trichocarpa] gi|222867343|gb|EEF04474.1| predicted protein [Populus trichocarpa] Length = 276 Score = 123 bits (308), Expect = 2e-26 Identities = 56/62 (90%), Positives = 60/62 (96%) Frame = -2 Query: 188 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWRETRFTKSPYQEYTDLLAKPAS 9 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFW+ETRF +SP+QEYTDLLAKP S Sbjct: 207 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWKETRFIRSPFQEYTDLLAKPTS 266 Query: 8 KI 3 K+ Sbjct: 267 KV 268 Score = 108 bits (270), Expect = 5e-22 Identities = 51/52 (98%), Positives = 52/52 (100%) Frame = -1 Query: 471 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 316 KEVATAIRGAIILAKLS+IPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV Sbjct: 133 KEVATAIRGAIILAKLSIIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 184 >ref|XP_002308954.1| predicted protein [Populus trichocarpa] gi|118485149|gb|ABK94437.1| unknown [Populus trichocarpa] gi|222854930|gb|EEE92477.1| predicted protein [Populus trichocarpa] Length = 270 Score = 123 bits (308), Expect = 2e-26 Identities = 56/62 (90%), Positives = 60/62 (96%) Frame = -2 Query: 188 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWRETRFTKSPYQEYTDLLAKPAS 9 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFW+ETRF +SP+QEYTDLLAKP S Sbjct: 201 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWKETRFIRSPFQEYTDLLAKPTS 260 Query: 8 KI 3 K+ Sbjct: 261 KV 262 Score = 108 bits (270), Expect = 5e-22 Identities = 51/52 (98%), Positives = 52/52 (100%) Frame = -1 Query: 471 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 316 KEVATAIRGAIILAKLS+IPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV Sbjct: 127 KEVATAIRGAIILAKLSIIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 178 >ref|XP_003525227.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max] Length = 272 Score = 120 bits (302), Expect = 9e-26 Identities = 55/61 (90%), Positives = 59/61 (96%) Frame = -2 Query: 188 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWRETRFTKSPYQEYTDLLAKPAS 9 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTP+FW+ETRF+KSP+QEYTDLLAKP Sbjct: 201 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTG 260 Query: 8 K 6 K Sbjct: 261 K 261 Score = 108 bits (271), Expect = 3e-22 Identities = 52/52 (100%), Positives = 52/52 (100%) Frame = -1 Query: 471 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 316 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV Sbjct: 127 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 178 >ref|XP_003630949.1| 40S ribosomal protein S2 [Medicago truncatula] gi|355524971|gb|AET05425.1| 40S ribosomal protein S2 [Medicago truncatula] Length = 279 Score = 120 bits (301), Expect = 1e-25 Identities = 54/61 (88%), Positives = 60/61 (98%) Frame = -2 Query: 188 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWRETRFTKSPYQEYTDLLAKPAS 9 IDDVFTSSRGSTKTLGNFVKATFDCL+KTYGFLTP+FW+ETRF+KSP+QEYTDLLAKP + Sbjct: 208 IDDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTA 267 Query: 8 K 6 K Sbjct: 268 K 268 Score = 108 bits (271), Expect = 3e-22 Identities = 52/52 (100%), Positives = 52/52 (100%) Frame = -1 Query: 471 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 316 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV Sbjct: 134 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 185 >ref|XP_003538262.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max] Length = 275 Score = 120 bits (300), Expect = 2e-25 Identities = 54/61 (88%), Positives = 59/61 (96%) Frame = -2 Query: 188 IDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWRETRFTKSPYQEYTDLLAKPAS 9 IDDVFTSSRGSTKTLGNFVKATFDCL+KTYGFLTP+FW+ETRF+KSP+QEYTDLLAKP Sbjct: 204 IDDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTG 263 Query: 8 K 6 K Sbjct: 264 K 264 Score = 108 bits (271), Expect = 3e-22 Identities = 52/52 (100%), Positives = 52/52 (100%) Frame = -1 Query: 471 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 316 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV Sbjct: 130 KEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMV 181