BLASTX nr result

ID: Bupleurum21_contig00006330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006330
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25823.1| unknown [Picea sitchensis]                             164   7e-39
gb|ABK23357.1| unknown [Picea sitchensis]                             164   7e-39
gb|ABK21813.1| unknown [Picea sitchensis] gi|224284774|gb|ACN401...   164   7e-39
emb|CAC27136.1| 40S ribosomal protein S2 [Picea abies]                164   7e-39
ref|XP_002513493.1| 40S ribosomal protein S2, putative [Ricinus ...   163   2e-38

>gb|ABK25823.1| unknown [Picea sitchensis]
          Length = 280

 Score =  164 bits (415), Expect = 7e-39
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +1

Query: 1   SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYG 180
           SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATF+CLLKTYG
Sbjct: 179 SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFECLLKTYG 238

Query: 181 FLTPDLWRETRFVKSPYQEYTDL 249
           FLTPDLWRETRF KSP+QEYTDL
Sbjct: 239 FLTPDLWRETRFSKSPFQEYTDL 261


>gb|ABK23357.1| unknown [Picea sitchensis]
          Length = 232

 Score =  164 bits (415), Expect = 7e-39
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +1

Query: 1   SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYG 180
           SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATF+CLLKTYG
Sbjct: 131 SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFECLLKTYG 190

Query: 181 FLTPDLWRETRFVKSPYQEYTDL 249
           FLTPDLWRETRF KSP+QEYTDL
Sbjct: 191 FLTPDLWRETRFSKSPFQEYTDL 213


>gb|ABK21813.1| unknown [Picea sitchensis] gi|224284774|gb|ACN40117.1| unknown
           [Picea sitchensis]
          Length = 270

 Score =  164 bits (415), Expect = 7e-39
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +1

Query: 1   SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYG 180
           SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATF+CLLKTYG
Sbjct: 169 SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFECLLKTYG 228

Query: 181 FLTPDLWRETRFVKSPYQEYTDL 249
           FLTPDLWRETRF KSP+QEYTDL
Sbjct: 229 FLTPDLWRETRFSKSPFQEYTDL 251


>emb|CAC27136.1| 40S ribosomal protein S2 [Picea abies]
          Length = 232

 Score =  164 bits (415), Expect = 7e-39
 Identities = 80/83 (96%), Positives = 82/83 (98%)
 Frame = +1

Query: 1   SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYG 180
           SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATF+CLLKTYG
Sbjct: 131 SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFECLLKTYG 190

Query: 181 FLTPDLWRETRFVKSPYQEYTDL 249
           FLTPDLWRETRF KSP+QEYTDL
Sbjct: 191 FLTPDLWRETRFSKSPFQEYTDL 213


>ref|XP_002513493.1| 40S ribosomal protein S2, putative [Ricinus communis]
           gi|223547401|gb|EEF48896.1| 40S ribosomal protein S2,
           putative [Ricinus communis]
          Length = 270

 Score =  163 bits (412), Expect = 2e-38
 Identities = 79/83 (95%), Positives = 80/83 (96%)
 Frame = +1

Query: 1   SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYG 180
           SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYG
Sbjct: 171 SVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYG 230

Query: 181 FLTPDLWRETRFVKSPYQEYTDL 249
           FLTPD WRET F KSP+QEYTDL
Sbjct: 231 FLTPDFWRETHFTKSPFQEYTDL 253


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