BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006302
         (1436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis ...   706   0.0  
emb|CBI36047.3| unnamed protein product [Vitis vinifera]              703   0.0  
ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vi...   703   0.0  
ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus c...   689   0.0  
ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) poly...   685   0.0  

>ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
          Length = 758

 Score =  706 bits (1822), Expect = 0.0
 Identities = 337/400 (84%), Positives = 372/400 (93%)
 Frame = -1

Query: 1340 NSIMVVSEGLDKHPGVTKPLSLAGPSEADLVRNKELEKFLEDAGLQESIEEASKRQEVLS 1161
            NS +  ++ + K  GVTKP+S+AGP + D+ RNKELEKFL DAGL ES EE++KR+EVLS
Sbjct: 13   NSPLPANQAVPKCYGVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLS 72

Query: 1160 RIREIVIVWVKQLTRLRGYTDQMVEDANAVILTFGSYRLGVHGPGADIDTLCIGPSYVNR 981
            RI +IV  WVKQLTR++GYTDQMVEDANA I TFGSYRLGVHGPGADIDTLC+GPSYVNR
Sbjct: 73   RIGQIVKDWVKQLTRIKGYTDQMVEDANAAIFTFGSYRLGVHGPGADIDTLCVGPSYVNR 132

Query: 980  EEDFFFILHNILEEVEEVTELQPVPDAHVPVMKFKFDGVSIDLLYASISLLVVPDDLDIS 801
            EEDFF++LHNILEE+EEV+ELQPVPDAHVPVMKFKFDG+SIDLLYASIS LVVP+DLDIS
Sbjct: 133  EEDFFYMLHNILEEMEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDIS 192

Query: 800  DVSVLYNVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKYWAKKRGVYSNVTGFLG 621
            DVSVLYNVDE TVRSLNGCRVADQILKLVPNVE FRT LRCLK+WAK+RGVYSNVTGFLG
Sbjct: 193  DVSVLYNVDEPTVRSLNGCRVADQILKLVPNVESFRTALRCLKFWAKRRGVYSNVTGFLG 252

Query: 620  GVNWALLVARVSQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSIWDPRRN 441
            GVNWALLVARV QLYPNA+PSML+SRFFRVYT WRWPNPVMLCAIEED+LG S+WDPR+N
Sbjct: 253  GVNWALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKN 312

Query: 440  PRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMTEQFQFGNKICEEIELNKSQWSALFEPY 261
            PRDRTHHMPIITPAYPCMNSSYNVSTSTLRVM EQFQFGNK+CEEIELNK+QWS+LFEPY
Sbjct: 313  PRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKAQWSSLFEPY 372

Query: 260  LFFESYKNYLQVDIVAADSDDLRAWKGWVESRLRQLTLMV 141
            LFFESYKNYLQVDIVAAD+DDLR+WKGWVESR R LTL++
Sbjct: 373  LFFESYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLI 412


>emb|CBI36047.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  703 bits (1814), Expect = 0.0
 Identities = 343/405 (84%), Positives = 368/405 (90%), Gaps = 8/405 (1%)
 Frame = -1

Query: 1331 MVVSEGLDKHP--------GVTKPLSLAGPSEADLVRNKELEKFLEDAGLQESIEEASKR 1176
            MV S+GL   P        GVTKP+S+AGP+E D+ R+ ELEKFL DAGL ES EEA KR
Sbjct: 1    MVSSKGLGDSPPRQSVKQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKR 60

Query: 1175 QEVLSRIREIVIVWVKQLTRLRGYTDQMVEDANAVILTFGSYRLGVHGPGADIDTLCIGP 996
             EVL R+ +IV  WVKQLTRLRGYTDQMVEDANAV+ TFGSYRLGVHGPG DIDTLCIGP
Sbjct: 61   AEVLDRLGQIVKDWVKQLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGP 120

Query: 995  SYVNREEDFFFILHNILEEVEEVTELQPVPDAHVPVMKFKFDGVSIDLLYASISLLVVPD 816
            SYV+REEDFFFILHNIL ++EEVTELQPVPDAHVPVMKFKFDG+SIDLLYASISLLVVP+
Sbjct: 121  SYVSREEDFFFILHNILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPE 180

Query: 815  DLDISDVSVLYNVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKYWAKKRGVYSNV 636
            DLDISD+SVLYN+DE TVRSLNGCRVADQILKLVPNVEHF TTLRCLK+WAK+RGVYSNV
Sbjct: 181  DLDISDLSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV 240

Query: 635  TGFLGGVNWALLVARVSQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSIW 456
            TGFLGGVNWALLVARV QLYPNA+PSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFS+W
Sbjct: 241  TGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVW 300

Query: 455  DPRRNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMTEQFQFGNKICEEIELNKSQWSA 276
            DPR+NPRDRTHHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GNKICE IEL+ +QW A
Sbjct: 301  DPRKNPRDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGA 360

Query: 275  LFEPYLFFESYKNYLQVDIVAADSDDLRAWKGWVESRLRQLTLMV 141
            LFEPYLFFESYKNYLQVDIVA D DDLRAWKGWVESRLRQLTLM+
Sbjct: 361  LFEPYLFFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMI 405


>ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 770

 Score =  703 bits (1814), Expect = 0.0
 Identities = 343/405 (84%), Positives = 368/405 (90%), Gaps = 8/405 (1%)
 Frame = -1

Query: 1331 MVVSEGLDKHP--------GVTKPLSLAGPSEADLVRNKELEKFLEDAGLQESIEEASKR 1176
            MV S+GL   P        GVTKP+S+AGP+E D+ R+ ELEKFL DAGL ES EEA KR
Sbjct: 1    MVSSKGLGDSPPRQSVKQYGVTKPISVAGPTEVDIQRSLELEKFLVDAGLYESKEEAIKR 60

Query: 1175 QEVLSRIREIVIVWVKQLTRLRGYTDQMVEDANAVILTFGSYRLGVHGPGADIDTLCIGP 996
             EVL R+ +IV  WVKQLTRLRGYTDQMVEDANAV+ TFGSYRLGVHGPG DIDTLCIGP
Sbjct: 61   AEVLDRLGQIVKDWVKQLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGP 120

Query: 995  SYVNREEDFFFILHNILEEVEEVTELQPVPDAHVPVMKFKFDGVSIDLLYASISLLVVPD 816
            SYV+REEDFFFILHNIL ++EEVTELQPVPDAHVPVMKFKFDG+SIDLLYASISLLVVP+
Sbjct: 121  SYVSREEDFFFILHNILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPE 180

Query: 815  DLDISDVSVLYNVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKYWAKKRGVYSNV 636
            DLDISD+SVLYN+DE TVRSLNGCRVADQILKLVPNVEHF TTLRCLK+WAK+RGVYSNV
Sbjct: 181  DLDISDLSVLYNIDEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNV 240

Query: 635  TGFLGGVNWALLVARVSQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSIW 456
            TGFLGGVNWALLVARV QLYPNA+PSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFS+W
Sbjct: 241  TGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVW 300

Query: 455  DPRRNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMTEQFQFGNKICEEIELNKSQWSA 276
            DPR+NPRDRTHHMPIITPAYPCMNSSYNVS STLRVM EQFQ+GNKICE IEL+ +QW A
Sbjct: 301  DPRKNPRDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGA 360

Query: 275  LFEPYLFFESYKNYLQVDIVAADSDDLRAWKGWVESRLRQLTLMV 141
            LFEPYLFFESYKNYLQVDIVA D DDLRAWKGWVESRLRQLTLM+
Sbjct: 361  LFEPYLFFESYKNYLQVDIVAVDIDDLRAWKGWVESRLRQLTLMI 405


>ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
            gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta,
            putative [Ricinus communis]
          Length = 754

 Score =  689 bits (1778), Expect = 0.0
 Identities = 330/390 (84%), Positives = 362/390 (92%)
 Frame = -1

Query: 1310 DKHPGVTKPLSLAGPSEADLVRNKELEKFLEDAGLQESIEEASKRQEVLSRIREIVIVWV 1131
            +K  G+TKP+SLAGPSEADL+RN +L KFL D+GL ES EE  KR+EVL RI +IV  W+
Sbjct: 24   NKRYGITKPISLAGPSEADLLRNADLVKFLVDSGLYESKEENLKREEVLCRIDQIVKDWI 83

Query: 1130 KQLTRLRGYTDQMVEDANAVILTFGSYRLGVHGPGADIDTLCIGPSYVNREEDFFFILHN 951
            KQLTR RGY+DQMV++ANAVI TFGSYRLGVHGPGADIDTLC+GPSYVNREEDFF +LH+
Sbjct: 84   KQLTRQRGYSDQMVDEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFILLHD 143

Query: 950  ILEEVEEVTELQPVPDAHVPVMKFKFDGVSIDLLYASISLLVVPDDLDISDVSVLYNVDE 771
            IL E++E+TELQPVPDAHVPVMKFKF G+SIDLLYASISL VVP+DLDIS  SVLY+VDE
Sbjct: 144  ILAEMDEITELQPVPDAHVPVMKFKFQGISIDLLYASISLPVVPEDLDISHGSVLYDVDE 203

Query: 770  QTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 591
            QTVRSLNGCRVADQILKLVPNVEHFRTTLRCLK+WAK+RGVYSNVTGFLGGVNWALLVAR
Sbjct: 204  QTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 263

Query: 590  VSQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSIWDPRRNPRDRTHHMPI 411
            + QLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGF +WDPRRNPRDR HHMPI
Sbjct: 264  LCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPRDRFHHMPI 323

Query: 410  ITPAYPCMNSSYNVSTSTLRVMTEQFQFGNKICEEIELNKSQWSALFEPYLFFESYKNYL 231
            ITPAYPCMNSSYNVS STLRVM EQFQ+GNKICEEIELNK+QWSALFEPYLFFE+YKNYL
Sbjct: 324  ITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEEIELNKAQWSALFEPYLFFEAYKNYL 383

Query: 230  QVDIVAADSDDLRAWKGWVESRLRQLTLMV 141
            Q+DI+AAD+DDL AWKGWVESRLRQLTL +
Sbjct: 384  QIDIIAADADDLLAWKGWVESRLRQLTLKI 413


>ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
            sativus]
          Length = 772

 Score =  685 bits (1767), Expect = 0.0
 Identities = 333/414 (80%), Positives = 371/414 (89%), Gaps = 14/414 (3%)
 Frame = -1

Query: 1340 NSIMVVSEGLDKHPGVTKPLSLAGPSEADLVRNKELEKFLEDAGLQESIEEASKRQEVLS 1161
            NS +  ++ + K  GVTKP+S+AGP + D+ RNKELEKFL DAGL ES EE++KR+EVLS
Sbjct: 13   NSPLPANQAVPKCYGVTKPISMAGPCDTDVQRNKELEKFLVDAGLYESKEESAKREEVLS 72

Query: 1160 RIREIVIVWVKQLTRLRGYTDQMVEDANAVILTFGSYRLGVHGPGADIDTLCIGPSYVNR 981
            RI +IV  WVKQLTR++GYTDQMVEDANAVI TFGSYRLGVHGPGADIDTLC+GPSYVNR
Sbjct: 73   RIGQIVKDWVKQLTRIKGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNR 132

Query: 980  EEDFFFILHNILEEVEEVTELQPVPDAHVPVMKFKFDGVSIDLLYASISLLVVPDDLDIS 801
            EEDFF++LHNILEE+EEV+ELQPVPDAHVPVMKFKFDG+SIDLLYASIS LVVP+DLDIS
Sbjct: 133  EEDFFYMLHNILEEMEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDIS 192

Query: 800  DVSVLYNVDEQTVRSLNGCRVADQILKLVP----------NVEHFRT----TLRCLKYWA 663
            DVSVLYNVDE TVRSLNGCRVADQILKLVP          N+  ++      LRCLK+WA
Sbjct: 193  DVSVLYNVDEPTVRSLNGCRVADQILKLVPFFFFVKFFHPNIPVWKLXSPFALRCLKFWA 252

Query: 662  KKRGVYSNVTGFLGGVNWALLVARVSQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIE 483
            K+RGVYSNVTGFLGGVNWALLVARV QLYPNA+PSML+SRFFRVYT WRWPNPVMLCAIE
Sbjct: 253  KRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIE 312

Query: 482  EDELGFSIWDPRRNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMTEQFQFGNKICEEI 303
            ED+LG S+WDPR+NPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVM EQFQFGNK+CEEI
Sbjct: 313  EDDLGCSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEI 372

Query: 302  ELNKSQWSALFEPYLFFESYKNYLQVDIVAADSDDLRAWKGWVESRLRQLTLMV 141
            ELNK+QWS+LFEPYLFFESYKNYLQVDIVAAD+DDLR+WKGWVESR R LTL++
Sbjct: 373  ELNKAQWSSLFEPYLFFESYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLI 426