BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006290
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|2...    85   1e-14
ref|XP_002535692.1| conserved hypothetical protein [Ricinus comm...    82   1e-13
ref|NP_178143.1| pentatricopeptide repeat-containing protein [Ar...    80   6e-13
ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containi...    79   1e-12
ref|XP_002322619.1| predicted protein [Populus trichocarpa] gi|2...    77   3e-12

>ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|222854864|gb|EEE92411.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 54/142 (38%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
 Frame = +3

Query: 327 GFSELETPVAADEAQASNTPRXXXXXXXXXXXXXXXXXXXXXXXPKDELEVSDSAAYGSK 506
           GFSELETP  A+E+   N                           ++ LE+SD+      
Sbjct: 21  GFSELETPANANESTV-NALAGNEDQLISEPELSDDDNDDIGEPSQNALELSDNETDSVV 79

Query: 507 KTFKPTRASNQLLMAVMNAPGLSVQKVLDKWVADGNKVNKSDIMAVNLDLRKRRMFGRAL 686
           K+    R + +L  A+++A  +SVQ VLDKWVA+G  +++ +I    ++LRKRRMFGRAL
Sbjct: 80  KSLPRKRPTTELFNAIVSASDVSVQSVLDKWVAEGKDLDRLEISNAMINLRKRRMFGRAL 139

Query: 687 QMLEW--SADRFECSERDYASR 746
           Q+ EW  +    E  ERDYASR
Sbjct: 140 QLSEWFEANKPQEFVERDYASR 161


>ref|XP_002535692.1| conserved hypothetical protein [Ricinus communis]
           gi|223522266|gb|EEF26691.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 194

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 63/225 (28%), Positives = 98/225 (43%)
 Frame = +3

Query: 15  RGIGLGSFHAGYARVEVTSSYLEKDVETAEHAKVISDKIIIFKRYHHKQCDSLKFHIGRH 194
           +G+ +G+     A+ E+ SS+LE +   ++  ++ S+K +    ++H      KFHI R 
Sbjct: 2   QGLRVGTSRICCAKSEMFSSHLEGNGAVSKPLQIASEKCL----FYHSTNVCSKFHIDRR 57

Query: 195 HMSSHAGMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSELETPVAADEAQA 374
            +SS AG +                                   GFSELETP  A+    
Sbjct: 58  SLSSKAGSESSKSEDDLED-------------------------GFSELETPANANTIDE 92

Query: 375 SNTPRXXXXXXXXXXXXXXXXXXXXXXXPKDELEVSDSAAYGSKKTFKPTRASNQLLMAV 554
           SN                           K+ LE+SD+ A   KKT    R  ++L   +
Sbjct: 93  SNA---VGGNEDELFSEPELDDDDGDSGAKNALELSDTEAGSGKKTTVRKRVPSELFKTI 149

Query: 555 MNAPGLSVQKVLDKWVADGNKVNKSDIMAVNLDLRKRRMFGRALQ 689
           + AP + +  VL+KWV +G  + + +I    L+LRKRRM+GRALQ
Sbjct: 150 IAAPNVPLSVVLNKWVEEGKTLGRPEISLAMLNLRKRRMYGRALQ 194


>ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|42572199|ref|NP_974190.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|145327755|ref|NP_001077853.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75262222|sp|Q9C977.1|PP135_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g80270, mitochondrial; Flags: Precursor
           gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical
           protein; 8785-10851 [Arabidopsis thaliana]
           gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis
           thaliana] gi|20259918|gb|AAM13306.1| unknown protein
           [Arabidopsis thaliana] gi|332198258|gb|AEE36379.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|332198259|gb|AEE36380.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332198260|gb|AEE36381.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 596

 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 41/97 (42%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
 Frame = +3

Query: 462 KDELEVSDSAAYGSKKTFKPTRASNQLLMAVMNAPGLSVQKVLDKWVADGNKVNKSDIMA 641
           ++EL++ ++    S+KT +  +  ++L   +++APGLS+   LDKWV +GN++ + +I  
Sbjct: 110 EEELDLIETDV--SRKTVE--KKQSELFKTIVSAPGLSIGSALDKWVEEGNEITRVEIAK 165

Query: 642 VNLDLRKRRMFGRALQMLEW--SADRFECSERDYASR 746
             L LR+RRM+GRALQM EW  +  + E +ERDYASR
Sbjct: 166 AMLQLRRRRMYGRALQMSEWLEANKKIEMTERDYASR 202


>ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Glycine max]
          Length = 609

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
 Frame = +3

Query: 459 PKDELEVSDSAAYGSKKTFKPTRASNQLLMAVMNAPGLSVQKVLDKWVADGNKVNKSDIM 638
           P DE+++SD  A  +KK  +  R  ++L  A+ NAPGLSV   L+KWV  G ++++ +I+
Sbjct: 121 PVDEMDLSD--ADPTKKKSQGRRTQSELFKAIANAPGLSVDSALNKWVEHGKELSRKEIL 178

Query: 639 AVNLDLRKRRMFGRALQMLEW--SADRFECSERDYASR 746
               +LR+R+M+GRA Q+ +W  S  + E  E DYAS+
Sbjct: 179 LAVRELRRRKMYGRAFQLFQWLESNKKLEFMESDYASQ 216


>ref|XP_002322619.1| predicted protein [Populus trichocarpa] gi|222867249|gb|EEF04380.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 38/76 (50%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
 Frame = +3

Query: 525 RASNQLLMAVMNAPGLSVQKVLDKWVADGNKVNKSDIMAVNLDLRKRRMFGRALQMLEW- 701
           +A ++L  A+++APG+SV  VLDKWVA+G  +++ +I     +LRKRR+FGRALQ+ EW 
Sbjct: 3   KAPSELFKAIISAPGVSVHSVLDKWVAEGRDLDQLEISNAMFNLRKRRLFGRALQLSEWV 62

Query: 702 -SADRFECSERDYASR 746
            +  R +  ERDYASR
Sbjct: 63  EANKRKDFDERDYASR 78