BLASTX nr result

ID: Bupleurum21_contig00006285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006285
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509525.1| ATP binding protein, putative [Ricinus commu...    65   1e-14
ref|XP_002298621.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-14
ref|XP_003633767.1| PREDICTED: fidgetin-like protein 1-like [Vit...    72   4e-11
emb|CBI21358.3| unnamed protein product [Vitis vinifera]               72   4e-11
ref|NP_189349.1| uncharacterized protein [Arabidopsis thaliana] ...    67   2e-09

>ref|XP_002509525.1| ATP binding protein, putative [Ricinus communis]
           gi|223549424|gb|EEF50912.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 660

 Score = 65.1 bits (157), Expect(2) = 1e-14
 Identities = 30/45 (66%), Positives = 38/45 (84%)
 Frame = +2

Query: 2   RKEVDSNLKRLHSLLFAADLALQRRDFASAQILSLRLIGFLDSRA 136
           RK+V+ NLKRLHSL F  DLAL+RRDF++A IL LRL+GF+DS +
Sbjct: 12  RKQVNENLKRLHSLQFGVDLALERRDFSAAHILGLRLLGFIDSHS 56



 Score = 39.3 bits (90), Expect(2) = 1e-14
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = +3

Query: 237 RSSLLPHYDRHVFEQAGRSPGHVFCKQEDMTL 332
           R SL+P  DR  FEQAGR+PG VF ++ D+ +
Sbjct: 80  RQSLIPDSDRRAFEQAGRAPGCVFSRKGDIDI 111


>ref|XP_002298621.1| predicted protein [Populus trichocarpa] gi|222845879|gb|EEE83426.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 68.9 bits (167), Expect(2) = 3e-14
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = +2

Query: 2   RKEVDSNLKRLHSLLFAADLALQRRDFASAQILSLRLIGFLDSRA 136
           RK+VD NLKRLHSL F ADLAL++RDF++A +LSLRL+GFLDS +
Sbjct: 29  RKQVDENLKRLHSLQFGADLALEKRDFSAAHLLSLRLLGFLDSHS 73



 Score = 33.9 bits (76), Expect(2) = 3e-14
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +3

Query: 237 RSSLLPHYDRHVFEQAGRSPGHVFCKQEDMTLIKLCSQSTFK 362
           R SL    DR  FEQAGR  G VF ++ D+ + K+     F+
Sbjct: 97  RRSLALESDRRAFEQAGRGLGQVFSRKGDIDIEKIKQSKYFR 138


>ref|XP_003633767.1| PREDICTED: fidgetin-like protein 1-like [Vitis vinifera]
          Length = 668

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 54/139 (38%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
 Frame = +2

Query: 2   RKEVDSNLKRLHSLLFAADLALQRRDFASAQILSLRLIGFLDSRARXXXXXXXXXXXXXX 181
           RK+VD NLKRLHSLLF +DLAL   DF+SAQ+L L LIGFLDS +               
Sbjct: 23  RKQVDQNLKRLHSLLFGSDLALHEGDFSSAQVLGLSLIGFLDSHSH--------SDVDEA 74

Query: 182 XXXXXXXXXXXXXXXXXXXFLPPSSL**TCI*TSRQKSRPCFLQARR-----------YD 328
                               +P S              R  F QA R            D
Sbjct: 75  FIRPIRSQVYSKIHQARRSLIPDS-------------DRQAFEQAGRVPGRVFGMRGDID 121

Query: 329 INKIMQSKYFQAILHQSKG 385
           I KI QSKYF+A+L QSKG
Sbjct: 122 IEKIKQSKYFRALLQQSKG 140


>emb|CBI21358.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 54/139 (38%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
 Frame = +2

Query: 2   RKEVDSNLKRLHSLLFAADLALQRRDFASAQILSLRLIGFLDSRARXXXXXXXXXXXXXX 181
           RK+VD NLKRLHSLLF +DLAL   DF+SAQ+L L LIGFLDS +               
Sbjct: 8   RKQVDQNLKRLHSLLFGSDLALHEGDFSSAQVLGLSLIGFLDSHSH--------SDVDEA 59

Query: 182 XXXXXXXXXXXXXXXXXXXFLPPSSL**TCI*TSRQKSRPCFLQARR-----------YD 328
                               +P S              R  F QA R            D
Sbjct: 60  FIRPIRSQVYSKIHQARRSLIPDS-------------DRQAFEQAGRVPGRVFGMRGDID 106

Query: 329 INKIMQSKYFQAILHQSKG 385
           I KI QSKYF+A+L QSKG
Sbjct: 107 IEKIKQSKYFRALLQQSKG 125


>ref|NP_189349.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332643750|gb|AEE77271.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 366

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/45 (73%), Positives = 38/45 (84%)
 Frame = +2

Query: 2   RKEVDSNLKRLHSLLFAADLALQRRDFASAQILSLRLIGFLDSRA 136
           RKEVD NLKRL SLLF AD  L++ DF+SAQIL LRL+GFLDSR+
Sbjct: 65  RKEVDENLKRLQSLLFGADKFLEKSDFSSAQILGLRLLGFLDSRS 109


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