BLASTX nr result
ID: Bupleurum21_contig00006275
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00006275
(972 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra... 301 2e-79
ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medi... 291 2e-76
ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su... 291 2e-76
ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex su... 289 8e-76
ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medi... 289 8e-76
>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
subunit 1-like [Cucumis sativus]
Length = 2427
Score = 301 bits (770), Expect = 2e-79
Identities = 156/234 (66%), Positives = 183/234 (78%), Gaps = 1/234 (0%)
Frame = +3
Query: 3 DLTTLEPLVSDGANLQVLIALANAFHALQPLKIHAFSYAWLELVSHRSFMPTLLTGNPQK 182
DL +LEP+V DGAN Q+L A ANAFHAL PLKI AFSYAWLELVSHRSFMP +LTGN QK
Sbjct: 2035 DLGSLEPIV-DGANFQILTAFANAFHALHPLKIPAFSYAWLELVSHRSFMPKMLTGNSQK 2093
Query: 183 GWPFFQRLLVDLFQFLEPFLRNAELGEPVHFLYKGSLRVLLVLLSDFPEFLCDYHFSFCD 362
GWP+ QRLLVD+FQF+EPFLRNAELG PVHFLYKG+LRVLLVLL DFPEFLCDYHF+FCD
Sbjct: 2094 GWPYIQRLLVDMFQFMEPFLRNAELGPPVHFLYKGTLRVLLVLLHDFPEFLCDYHFTFCD 2153
Query: 363 VIPPAAYKCEI*FSAHFLVT*GYQILQLPT*RLICWLKL-LSPPVFSRRSMQPALRAKHI 539
VIPP+ + + F P ++ ++ SP + S + AL+ K +
Sbjct: 2154 VIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLAEINQSPRILS--EVDGALKLKQM 2211
Query: 540 KNDVDEYLKTKQQGSSFLSELKQKLLLPPSDAARAGTQYNIPLMNSLVLYVGMQ 701
K DVDEYLKT+QQGSSFL++LKQKLLLPPS+AA AGT+YN+PL+NSLVLYVGMQ
Sbjct: 2212 KADVDEYLKTRQQGSSFLADLKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQ 2265
Score = 68.9 bits (167), Expect = 2e-09
Identities = 30/47 (63%), Positives = 36/47 (76%), Gaps = 4/47 (8%)
Frame = +3
Query: 696 MQNPRYNFWSLSFTRCAPEIEKLFELVSRSCGGPKPVEE----GWFP 824
++NPRYNFW+ SF RCAP+IE+LFE VSRSCGGPK +E W P
Sbjct: 2377 IKNPRYNFWNRSFIRCAPDIERLFESVSRSCGGPKSADENMVQNWVP 2423
>ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
gi|355520704|gb|AET01158.1| CCR4-NOT transcription
complex subunit [Medicago truncatula]
Length = 2418
Score = 291 bits (745), Expect = 2e-76
Identities = 151/235 (64%), Positives = 182/235 (77%), Gaps = 1/235 (0%)
Frame = +3
Query: 3 DLTTLEPLVSDGANLQVLIALANAFHALQPLKIHAFSYAWLELVSHRSFMPTLLTGNPQK 182
DL +LEP V+DGANLQ+L A ANAFHALQPLK+ FS+AWLELVSHRSFMP +LTGN QK
Sbjct: 2016 DLGSLEP-VTDGANLQILTAFANAFHALQPLKVPGFSFAWLELVSHRSFMPKMLTGNGQK 2074
Query: 183 GWPFFQRLLVDLFQFLEPFLRNAELGEPVHFLYKGSLRVLLVLLSDFPEFLCDYHFSFCD 362
GWP+ QRLLVDLFQF+EPFLR+AELG+PV LYKG+LRVLLVLL DFPEFLCDYHF+FCD
Sbjct: 2075 GWPYIQRLLVDLFQFMEPFLRHAELGDPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCD 2134
Query: 363 VIPPAAYKCEI*FSAHFLVT*GYQILQLPT*RLICWLKLL-SPPVFSRRSMQPALRAKHI 539
VIPP+ + + F + P ++ ++ SP + S + LRAK +
Sbjct: 2135 VIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILS--EVDAVLRAKQM 2192
Query: 540 KNDVDEYLKTKQQGSSFLSELKQKLLLPPSDAARAGTQYNIPLMNSLVLYVGMQN 704
K D+DEYLKT+QQ S FLSELK+KLLL P++AA AGT+YN+PL+NSLVLYVGMQN
Sbjct: 2193 KADIDEYLKTRQQSSPFLSELKEKLLLSPNEAASAGTRYNVPLINSLVLYVGMQN 2247
Score = 72.0 bits (175), Expect = 2e-10
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 4/45 (8%)
Frame = +3
Query: 696 MQNPRYNFWSLSFTRCAPEIEKLFELVSRSCGGPKPVEE----GW 818
++N RYNFW+ SF RCAPEIEKLFE VSRSCGGPKPV+E GW
Sbjct: 2371 IKNLRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDESMVSGW 2415
>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
max]
Length = 2424
Score = 291 bits (744), Expect = 2e-76
Identities = 152/234 (64%), Positives = 182/234 (77%), Gaps = 1/234 (0%)
Frame = +3
Query: 3 DLTTLEPLVSDGANLQVLIALANAFHALQPLKIHAFSYAWLELVSHRSFMPTLLTGNPQK 182
DL +LEP V+DGANLQ+L A ANAFHALQPLK+ AFS+AWLEL+SHRSFMP +LTGN QK
Sbjct: 2037 DLGSLEP-VTDGANLQILTAFANAFHALQPLKVPAFSFAWLELISHRSFMPKMLTGNGQK 2095
Query: 183 GWPFFQRLLVDLFQFLEPFLRNAELGEPVHFLYKGSLRVLLVLLSDFPEFLCDYHFSFCD 362
GWP+ QRLLVDLFQF+EPFLR+AELGEPV LYKG+LRVLLVLL DFPEFLCDYHF+FCD
Sbjct: 2096 GWPYIQRLLVDLFQFMEPFLRHAELGEPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCD 2155
Query: 363 VIPPAAYKCEI*FSAHFLVT*GYQILQLPT*RLICWLKLL-SPPVFSRRSMQPALRAKHI 539
VIPP+ + + F + P ++ ++ SP + S + AL+AK +
Sbjct: 2156 VIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILS--EVDAALKAKQM 2213
Query: 540 KNDVDEYLKTKQQGSSFLSELKQKLLLPPSDAARAGTQYNIPLMNSLVLYVGMQ 701
K DVDEYLKT+QQ S FLSELK KLLL P++AA AGT+YN+PL+NSLVLYVGMQ
Sbjct: 2214 KVDVDEYLKTRQQSSPFLSELKDKLLLSPNEAASAGTRYNVPLINSLVLYVGMQ 2267
Score = 74.7 bits (182), Expect = 3e-11
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 4/45 (8%)
Frame = +3
Query: 696 MQNPRYNFWSLSFTRCAPEIEKLFELVSRSCGGPKPVEE----GW 818
++NPRYNFW+ SF RCAPEIEKLFE VSRSCGGPKPV++ GW
Sbjct: 2379 IKNPRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDDSMVSGW 2423
>ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
max]
Length = 2327
Score = 289 bits (739), Expect = 8e-76
Identities = 150/234 (64%), Positives = 181/234 (77%), Gaps = 1/234 (0%)
Frame = +3
Query: 3 DLTTLEPLVSDGANLQVLIALANAFHALQPLKIHAFSYAWLELVSHRSFMPTLLTGNPQK 182
DL +LEP V+DGANLQ+L ANAFHALQPLK+ AFS+AWLEL+SHRSFMP +LTGN QK
Sbjct: 1940 DLGSLEP-VTDGANLQILTGFANAFHALQPLKVPAFSFAWLELISHRSFMPKMLTGNGQK 1998
Query: 183 GWPFFQRLLVDLFQFLEPFLRNAELGEPVHFLYKGSLRVLLVLLSDFPEFLCDYHFSFCD 362
GWP+ QRLLVDLFQF+EPFLR+AELGEPV LYKG+LRVLLVLL DFPEFLCDYHF+FCD
Sbjct: 1999 GWPYIQRLLVDLFQFMEPFLRHAELGEPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCD 2058
Query: 363 VIPPAAYKCEI*FSAHFLVT*GYQILQLPT*RLICWLKLL-SPPVFSRRSMQPALRAKHI 539
VIPP+ + + F + P ++ ++ SP + S + AL+AK +
Sbjct: 2059 VIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILS--EVDAALKAKQM 2116
Query: 540 KNDVDEYLKTKQQGSSFLSELKQKLLLPPSDAARAGTQYNIPLMNSLVLYVGMQ 701
K DVDEYLKT+QQ S FLSELK K+LL P++AA AGT+YN+PL+NSLVLYVGMQ
Sbjct: 2117 KADVDEYLKTRQQSSPFLSELKDKMLLSPNEAASAGTRYNVPLINSLVLYVGMQ 2170
Score = 74.7 bits (182), Expect = 3e-11
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 4/45 (8%)
Frame = +3
Query: 696 MQNPRYNFWSLSFTRCAPEIEKLFELVSRSCGGPKPVEE----GW 818
++NPRYNFW+ SF RCAPEIEKLFE VSRSCGGPKPV++ GW
Sbjct: 2282 IKNPRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDDSMVSGW 2326
>ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
gi|355520705|gb|AET01159.1| CCR4-NOT transcription
complex subunit [Medicago truncatula]
Length = 2410
Score = 289 bits (739), Expect = 8e-76
Identities = 150/234 (64%), Positives = 181/234 (77%), Gaps = 1/234 (0%)
Frame = +3
Query: 3 DLTTLEPLVSDGANLQVLIALANAFHALQPLKIHAFSYAWLELVSHRSFMPTLLTGNPQK 182
DL +LEP V+DGANLQ+L A ANAFHALQPLK+ FS+AWLELVSHRSFMP +LTGN QK
Sbjct: 2016 DLGSLEP-VTDGANLQILTAFANAFHALQPLKVPGFSFAWLELVSHRSFMPKMLTGNGQK 2074
Query: 183 GWPFFQRLLVDLFQFLEPFLRNAELGEPVHFLYKGSLRVLLVLLSDFPEFLCDYHFSFCD 362
GWP+ QRLLVDLFQF+EPFLR+AELG+PV LYKG+LRVLLVLL DFPEFLCDYHF+FCD
Sbjct: 2075 GWPYIQRLLVDLFQFMEPFLRHAELGDPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCD 2134
Query: 363 VIPPAAYKCEI*FSAHFLVT*GYQILQLPT*RLICWLKLL-SPPVFSRRSMQPALRAKHI 539
VIPP+ + + F + P ++ ++ SP + S + LRAK +
Sbjct: 2135 VIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILS--EVDAVLRAKQM 2192
Query: 540 KNDVDEYLKTKQQGSSFLSELKQKLLLPPSDAARAGTQYNIPLMNSLVLYVGMQ 701
K D+DEYLKT+QQ S FLSELK+KLLL P++AA AGT+YN+PL+NSLVLYVGMQ
Sbjct: 2193 KADIDEYLKTRQQSSPFLSELKEKLLLSPNEAASAGTRYNVPLINSLVLYVGMQ 2246
Score = 72.0 bits (175), Expect = 2e-10
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 4/45 (8%)
Frame = +3
Query: 696 MQNPRYNFWSLSFTRCAPEIEKLFELVSRSCGGPKPVEE----GW 818
++N RYNFW+ SF RCAPEIEKLFE VSRSCGGPKPV+E GW
Sbjct: 2363 IKNLRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDESMVSGW 2407