BLASTX nr result

ID: Bupleurum21_contig00006273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006273
         (1514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265636.1| PREDICTED: uncharacterized protein LOC100267...   439   e-120
ref|XP_003631851.1| PREDICTED: uncharacterized protein LOC100267...   438   e-120
emb|CBI28632.3| unnamed protein product [Vitis vinifera]              438   e-120
ref|XP_003616194.1| Pre-mRNA-splicing factor 38B [Medicago trunc...   428   e-117
ref|XP_004149874.1| PREDICTED: uncharacterized protein LOC101215...   426   e-117

>ref|XP_002265636.1| PREDICTED: uncharacterized protein LOC100267328 isoform 1 [Vitis
            vinifera]
          Length = 433

 Score =  439 bits (1128), Expect = e-120
 Identities = 210/255 (82%), Positives = 227/255 (89%), Gaps = 3/255 (1%)
 Frame = -3

Query: 1470 KPIDQLLEKVLCMNILSSDYFKELYRLKTYHEIIDEIYNQVDHVEPWMTGNCRGPSTAFC 1291
            KPID LLEKVLCMNILSSDYFKELYRLKTYHE++DEIYNQVDHVEPWMTGNCRGPSTAFC
Sbjct: 8    KPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAFC 67

Query: 1290 LLYKFFTMKLTAKQMHGLLKHPDSPYIRAVGFLYLRYAAEPKTLWGWFEPYIKDDEEFSP 1111
            LLYKFFTMKLT KQMHGLLKHPDSPYIRAVGFLYLRYA +PKTLW WFEPY+KD+EEFSP
Sbjct: 68   LLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAGDPKTLWNWFEPYVKDEEEFSP 127

Query: 1110 GSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVMRLIVANLEKLKLPTKHAGVTGESTR 931
            GS GRMTTMG Y+RDLLLGQYYFDTLFPRIPVP+MR IVANLEK+KLP+KHAGVTG++TR
Sbjct: 128  GSTGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPIMRQIVANLEKMKLPSKHAGVTGDTTR 187

Query: 930  -GSDDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRNM--PPPSYDRNYXXXXXXXX 760
             GSDDTARRPPSVKA+LSVSFGQRAPHRASTRDSSPVRR +  PPPSYDRN         
Sbjct: 188  HGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRNSSDDLRRSP 247

Query: 759  XXXXXXXXDLADQEF 715
                    +L+D+E+
Sbjct: 248  SSRRSQSRELSDREY 262



 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 29/52 (55%), Positives = 34/52 (65%)
 Frame = -3

Query: 426 SPRKDSASSNLAKLKDLYGDLSNKKEDDENRNTPTRVNGAEEVIRLGGSTWK 271
           S  K SAS+NLAKL+DLYGD  ++K          R N  EEVIRLGGS+WK
Sbjct: 382 SKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEEVIRLGGSSWK 433


>ref|XP_003631851.1| PREDICTED: uncharacterized protein LOC100267328 isoform 2 [Vitis
            vinifera]
          Length = 407

 Score =  438 bits (1127), Expect = e-120
 Identities = 207/231 (89%), Positives = 220/231 (95%), Gaps = 3/231 (1%)
 Frame = -3

Query: 1470 KPIDQLLEKVLCMNILSSDYFKELYRLKTYHEIIDEIYNQVDHVEPWMTGNCRGPSTAFC 1291
            KPID LLEKVLCMNILSSDYFKELYRLKTYHE++DEIYNQVDHVEPWMTGNCRGPSTAFC
Sbjct: 8    KPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAFC 67

Query: 1290 LLYKFFTMKLTAKQMHGLLKHPDSPYIRAVGFLYLRYAAEPKTLWGWFEPYIKDDEEFSP 1111
            LLYKFFTMKLT KQMHGLLKHPDSPYIRAVGFLYLRYA +PKTLW WFEPY+KD+EEFSP
Sbjct: 68   LLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAGDPKTLWNWFEPYVKDEEEFSP 127

Query: 1110 GSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVMRLIVANLEKLKLPTKHAGVTGESTR 931
            GS GRMTTMG Y+RDLLLGQYYFDTLFPRIPVP+MR IVANLEK+KLP+KHAGVTG++TR
Sbjct: 128  GSTGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPIMRQIVANLEKMKLPSKHAGVTGDTTR 187

Query: 930  -GSDDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRNM--PPPSYDRN 787
             GSDDTARRPPSVKA+LSVSFGQRAPHRASTRDSSPVRR +  PPPSYDRN
Sbjct: 188  HGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRN 238



 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 29/52 (55%), Positives = 34/52 (65%)
 Frame = -3

Query: 426 SPRKDSASSNLAKLKDLYGDLSNKKEDDENRNTPTRVNGAEEVIRLGGSTWK 271
           S  K SAS+NLAKL+DLYGD  ++K          R N  EEVIRLGGS+WK
Sbjct: 356 SKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEEVIRLGGSSWK 407


>emb|CBI28632.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  438 bits (1127), Expect = e-120
 Identities = 207/231 (89%), Positives = 220/231 (95%), Gaps = 3/231 (1%)
 Frame = -3

Query: 1470 KPIDQLLEKVLCMNILSSDYFKELYRLKTYHEIIDEIYNQVDHVEPWMTGNCRGPSTAFC 1291
            KPID LLEKVLCMNILSSDYFKELYRLKTYHE++DEIYNQVDHVEPWMTGNCRGPSTAFC
Sbjct: 8    KPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAFC 67

Query: 1290 LLYKFFTMKLTAKQMHGLLKHPDSPYIRAVGFLYLRYAAEPKTLWGWFEPYIKDDEEFSP 1111
            LLYKFFTMKLT KQMHGLLKHPDSPYIRAVGFLYLRYA +PKTLW WFEPY+KD+EEFSP
Sbjct: 68   LLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAGDPKTLWNWFEPYVKDEEEFSP 127

Query: 1110 GSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVMRLIVANLEKLKLPTKHAGVTGESTR 931
            GS GRMTTMG Y+RDLLLGQYYFDTLFPRIPVP+MR IVANLEK+KLP+KHAGVTG++TR
Sbjct: 128  GSTGRMTTMGAYVRDLLLGQYYFDTLFPRIPVPIMRQIVANLEKMKLPSKHAGVTGDTTR 187

Query: 930  -GSDDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRNM--PPPSYDRN 787
             GSDDTARRPPSVKA+LSVSFGQRAPHRASTRDSSPVRR +  PPPSYDRN
Sbjct: 188  HGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRN 238



 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 32/60 (53%), Positives = 38/60 (63%)
 Frame = -3

Query: 450 RASADRIPSPRKDSASSNLAKLKDLYGDLSNKKEDDENRNTPTRVNGAEEVIRLGGSTWK 271
           R+S D   S  K SAS+NLAKL+DLYGD  ++K          R N  EEVIRLGGS+WK
Sbjct: 324 RSSRDGNGSKEKTSASANLAKLRDLYGDTGDQKGGSAMERGSRRDNSGEEVIRLGGSSWK 383


>ref|XP_003616194.1| Pre-mRNA-splicing factor 38B [Medicago truncatula]
            gi|355517529|gb|AES99152.1| Pre-mRNA-splicing factor 38B
            [Medicago truncatula]
          Length = 433

 Score =  428 bits (1100), Expect = e-117
 Identities = 203/224 (90%), Positives = 212/224 (94%), Gaps = 1/224 (0%)
 Frame = -3

Query: 1470 KPIDQLLEKVLCMNILSSDYFKELYRLKTYHEIIDEIYNQVDHVEPWMTGNCRGPSTAFC 1291
            +PI+ LLEKVLCMNILSSDYFKELYRLKTYHE+IDEIYNQVDHVEPWMTGNCRGPSTAFC
Sbjct: 8    RPIESLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAFC 67

Query: 1290 LLYKFFTMKLTAKQMHGLLKHPDSPYIRAVGFLYLRYAAEPKTLWGWFEPYIKDDEEFSP 1111
            LLYKFFTMKLT KQMHGLLKHPDSPYIRAVGFLYLRY A+PKTLW WFEPY KDDEEFSP
Sbjct: 68   LLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYYADPKTLWSWFEPYAKDDEEFSP 127

Query: 1110 GSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVMRLIVANLEKLKLPTKHAGVTGESTR 931
            GSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVMR +VANLEKLKLPT H G TGE+TR
Sbjct: 128  GSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVMRQVVANLEKLKLPTTHCGTTGETTR 187

Query: 930  -GSDDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRNMPPP 802
             GSDDTARRPPSVKA+LSVSFGQRAPHRASTRDSSP+RR +P P
Sbjct: 188  HGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPIRRTVPAP 231



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 38/63 (60%), Positives = 41/63 (65%)
 Frame = -3

Query: 459 HTQRASADRIPSPRKDSASSNLAKLKDLYGDLSNKKEDDENRNTPTRVNGAEEVIRLGGS 280
           H  R+S  R  S +K SASSNLAKLKDLYGDL   K D      P R N  EEVIRLGGS
Sbjct: 371 HDSRSSPQRDGS-KKTSASSNLAKLKDLYGDLGESKGDANMERIPRRDNSGEEVIRLGGS 429

Query: 279 TWK 271
           +WK
Sbjct: 430 SWK 432


>ref|XP_004149874.1| PREDICTED: uncharacterized protein LOC101215555 [Cucumis sativus]
          Length = 438

 Score =  426 bits (1095), Expect = e-117
 Identities = 200/229 (87%), Positives = 217/229 (94%), Gaps = 1/229 (0%)
 Frame = -3

Query: 1470 KPIDQLLEKVLCMNILSSDYFKELYRLKTYHEIIDEIYNQVDHVEPWMTGNCRGPSTAFC 1291
            KPID LLEKVLCMNILSSDYFKELYRLKTYHE++DEIYNQVDHVEPWMTGNCRGPSTAFC
Sbjct: 8    KPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAFC 67

Query: 1290 LLYKFFTMKLTAKQMHGLLKHPDSPYIRAVGFLYLRYAAEPKTLWGWFEPYIKDDEEFSP 1111
            LLYKFFTMKLT KQMHGLLKH DSPYIRA+GFLYLRY A+PKTLW WFEPY+KDDEEFSP
Sbjct: 68   LLYKFFTMKLTVKQMHGLLKHEDSPYIRAIGFLYLRYVADPKTLWNWFEPYVKDDEEFSP 127

Query: 1110 GSNGRMTTMGVYIRDLLLGQYYFDTLFPRIPVPVMRLIVANLEKLKLPTKHAGVTGESTR 931
            GS+GRMTTMGVY+RDLLLGQYYFDTLFPRIPVPV+R +V+NLEKLKLP+KH+GVTGE+ R
Sbjct: 128  GSHGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVVSNLEKLKLPSKHSGVTGETHR 187

Query: 930  -GSDDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRNMPPPSYDRN 787
             GS+DTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRR +P  + DR+
Sbjct: 188  IGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTLPSSANDRD 236


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