BLASTX nr result

ID: Bupleurum21_contig00006259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006259
         (1114 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            290   4e-76
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]   280   4e-73
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   268   2e-69
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]   267   3e-69
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   265   1e-68

>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  290 bits (742), Expect = 4e-76
 Identities = 158/376 (42%), Positives = 220/376 (58%), Gaps = 9/376 (2%)
 Frame = -3

Query: 1109 TWPSVNSVNTIQGNT-SNSQSFHWIVDSGATDHITA-----HFTSLINPISCNITLQLPN 948
            T PS N+   +  +   NS S  WIVD+GAT+H+++     H T L+     N  + LPN
Sbjct: 106  TTPSTNAAGIVNCSVVHNSSSHRWIVDTGATNHMSSTPDLLHDTQLLPTTEYN-KVHLPN 164

Query: 947  GHTINVTHIGSVKLDNDLILQQVLCVPGFTHNLLSIPKLLSQTKFNVVFSADSCSLQDPT 768
            G  I +   G  +L    I   VL +P F +NLLS+ +L  +    +VF  D C LQD  
Sbjct: 165  GQKIPIVFSGKSRLTLGDI-SHVLYIPDFKYNLLSVSELTKELHCCMVFYPDHCILQDLH 223

Query: 767  WKRELEIGKLQGGLYVYTPVSSSSNFCNLQEQQTFSSSCNLLKANAHVWHARLGHVPSSI 588
              +    G ++ GLY ++ + S +   ++      S+  ++      +WH RLGH+P  +
Sbjct: 224  TVKVKGTGSMENGLYYWSHIVSPTVAYSVSPSVALSTLDDV-----DLWHRRLGHIPHKV 278

Query: 587  LKQLSF---ECNSDFQDCDSCHFAKQSKLSFSNSDSCSAALFDLVHADLWGPYSHKTHDN 417
            L+Q+       +S    C  C  AKQ++L F  S + +  +FDL+HAD+WGPY   THD 
Sbjct: 279  LQQMQIPHISSSSKLTSCPICPLAKQTRLPFPQSPTRADNVFDLIHADVWGPYKFPTHDG 338

Query: 416  CHYFLTVLEDKSRTTWIFLLNDKSQVPIILKDFFAYVQNQFKTNVKILRTDHGTEFMNKS 237
              YFLT+++D SR  WIFLL  KS V I+LKDF   +Q QF   +KI R+D+GTEF N  
Sbjct: 339  NRYFLTLVDDCSRMIWIFLLKYKSDVFIVLKDFLQLIQRQFGGYIKIFRSDNGTEFFNSH 398

Query: 236  LSVTLASLGIIHQTSCVYTPQQNGRVERKHRHLLATSRALRFHSGLPIQFWGDCLLTATY 57
             S    + GI+HQ+SCVYTPQQNG VER+HR +L  +RA+RF + LPI+FWG C+  A Y
Sbjct: 399  CSELFRTAGIVHQSSCVYTPQQNGVVERRHRQILEVARAIRFQANLPIRFWGLCVQNAVY 458

Query: 56   LINRTPSTTLQGKSPF 9
            LINR PST L G+SPF
Sbjct: 459  LINRIPSTALSGRSPF 474


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score =  280 bits (717), Expect = 4e-73
 Identities = 149/356 (41%), Positives = 210/356 (58%), Gaps = 7/356 (1%)
 Frame = -3

Query: 1052 SFHWIVDSGATDHITAH---FTSLINPISCNITLQLPNGHTINVTHIGSVKLDNDLILQQ 882
            S  WI+D+ ATDHI++    F      IS  + L LP+G   N+   GS+ L++   L+ 
Sbjct: 403  SHRWIIDNSATDHISSSPKLFLHKDKNISLPLVL-LPSGEKANIVAKGSLPLNSVYYLRD 461

Query: 881  VLCVPGFTHNLLSIPKLLSQTKFNVVFSADSCSLQDPTWKRELEIGKLQGGLYVYTPVSS 702
            VLCVP F  +L+S+ +L      +V F    C LQD   +R + +GK + GLY    +++
Sbjct: 462  VLCVPTFKVDLMSVSRLTRGLNCSVTFFPHWCVLQDLATRRMIGLGKQRDGLYYLAALTT 521

Query: 701  SSNFCNLQEQQTFSSSCNLLKANAHVWHARLGHVPSSILKQLSFE-CNSDFQ---DCDSC 534
            +    N         +CNL  ++  +WH+RLGHV  S L  ++    N   Q   DC  C
Sbjct: 522  NKTETNSYSSPNRPPTCNLTTSSTDLWHSRLGHVSHSRLSFIAKNFLNFSIQFNNDCPIC 581

Query: 533  HFAKQSKLSFSNSDSCSAALFDLVHADLWGPYSHKTHDNCHYFLTVLEDKSRTTWIFLLN 354
              AKQ +L F  S+  S   FDL+H D+WG Y H +    HYFLT+++D +R TWIFL+ 
Sbjct: 582  LLAKQHRLPFGTSEISSEKPFDLIHCDIWGRYKHSSLSGAHYFLTIVDDYTRFTWIFLMK 641

Query: 353  DKSQVPIILKDFFAYVQNQFKTNVKILRTDHGTEFMNKSLSVTLASLGIIHQTSCVYTPQ 174
             K +   ++K FF+YV  QF +++KI R+D+G EF+  SL       G++ Q SCVYTPQ
Sbjct: 642  HKDEAQPLIKHFFSYVSTQFASHIKIFRSDNGGEFL--SLQSFFKDNGVLFQHSCVYTPQ 699

Query: 173  QNGRVERKHRHLLATSRALRFHSGLPIQFWGDCLLTATYLINRTPSTTLQGKSPFE 6
            QNG VERKHRH+L  +RAL+F + LP QFWG+C LTA ++INR PS  L  K+PFE
Sbjct: 700  QNGVVERKHRHILQVARALKFQAQLPTQFWGECALTAVHIINRLPSPVLSFKTPFE 755


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  268 bits (685), Expect = 2e-69
 Identities = 149/361 (41%), Positives = 209/361 (57%), Gaps = 6/361 (1%)
 Frame = -3

Query: 1070 NTSNSQSFHWIVDS-GATDHITAHFTSLINPISCNIT-LQLPNGHTINVTHIGSVKLDND 897
            N SNS +     ++ GATDHI +H +   +    N+T + LPNG    +TH G+V  D+ 
Sbjct: 632  NHSNSGNIDAYANAAGATDHIVSHMSLFTDLKPSNVTTVNLPNGVASPITHTGTVIFDSQ 691

Query: 896  LILQQVLCVPGFTHNLLSIPKLLSQTKFNVVFSADSCSLQDPTWKRELEIGKLQGGLYVY 717
            L L+ VLCVP F  NL+S  KL       ++F  D C LQD    + +  GK +GGLY  
Sbjct: 692  LTLKDVLCVPSFNLNLISASKLAKDQNCYIIFFPDYCILQDLVSGKMIGSGKQRGGLYYM 751

Query: 716  TPVSSSSNFCNLQEQQTFSSSCNLLKANAHVWHARLGHVPSSILKQLSFECNSDFQD--- 546
             P ++ S   ++ +              + +WH RLGH   S  K LS       ++   
Sbjct: 752  HPSTNKSVVFHVSQP-------------SDLWHLRLGHPSFSRFKLLSRLLPDIHKEIGN 798

Query: 545  -CDSCHFAKQSKLSFSNSDSCSAALFDLVHADLWGPYSHKTHDNCHYFLTVLEDKSRTTW 369
             C  C  AKQ++L F  S   +   F L+H D+WGP+    H    YFLT+++D SR TW
Sbjct: 799  HCPICPQAKQTRLPFPKSSITTKFPFSLLHCDVWGPHKIPAHTGSRYFLTIVDDFSRCTW 858

Query: 368  IFLLNDKSQVPIILKDFFAYVQNQFKTNVKILRTDHGTEFMNKSLSVTLASLGIIHQTSC 189
            IFL++ KS+   +L +F  +V+ QF T+V+ +R D+GTEF+   L + L + GI  QTSC
Sbjct: 859  IFLMHHKSETQSLLTNFVQFVKTQFHTDVQTVRMDNGTEFI--PLRIFLQNKGIELQTSC 916

Query: 188  VYTPQQNGRVERKHRHLLATSRALRFHSGLPIQFWGDCLLTATYLINRTPSTTLQGKSPF 9
            +YTPQQNG VERKHRH+L  +R+L F S +P++FWG+C+LTA YLINR P+  L  KSPF
Sbjct: 917  IYTPQQNGVVERKHRHILNVARSLMFQSNVPLEFWGECVLTAVYLINRIPTPLLSNKSPF 976

Query: 8    E 6
            E
Sbjct: 977  E 977


>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score =  267 bits (683), Expect = 3e-69
 Identities = 146/368 (39%), Positives = 215/368 (58%), Gaps = 6/368 (1%)
 Frame = -3

Query: 1091 SVNTIQGNTSNSQSFHWIVDSGATDHITAHFTSLINPISC-NITLQLPNGHTINVTHIGS 915
            SV+   GN    Q+  WI+DSGAT H+    +   + I   N+ + LP G T+ +  +GS
Sbjct: 265  SVSNFAGNKVKIQNKGWIIDSGATHHVCNDISLFDSSIDVQNVRVTLPTGITVPIDRVGS 324

Query: 914  VKLDNDLILQQVLCVPGFTHNLLSIPKLLSQTKFNVVFSADSCSLQDPTWKRELEIGKLQ 735
            V L  D+ L  VL VP F +NLLS+         ++VF+ D+C +Q+P+  + +  G  +
Sbjct: 325  VILSKDVKLLNVLFVPTFRYNLLSVSAFTDTLSLSMVFTPDACIIQEPSRGKMIGKGSRK 384

Query: 734  GGLYVYTPVSSSSNFCNLQEQQTFSSSCNLLKANA-HVWHARLGHVPSSILKQLS----F 570
            G LY         +F +    + F ++  +  +N   +WH+RLGH   S LK L     F
Sbjct: 385  GQLY-------QLDFDSFVADKAFVAASRIPTSNILSLWHSRLGHPSFSRLKGLQSVLDF 437

Query: 569  ECNSDFQDCDSCHFAKQSKLSFSNSDSCSAALFDLVHADLWGPYSHKTHDNCHYFLTVLE 390
            + + D   C+ C  AKQ  L + + +   ++ FDL+H D+WGP+S  + +   +FLT+++
Sbjct: 438  DSSFDLTPCNVCPLAKQRCLPYISLNKRCSSTFDLLHLDIWGPFSVGSVEGYKFFLTIVD 497

Query: 389  DKSRTTWIFLLNDKSQVPIILKDFFAYVQNQFKTNVKILRTDHGTEFMNKSLSVTLASLG 210
            D SR TW+++L +KS+V   + DFFA+V+ QF   VK +R+D+  E     LS    SLG
Sbjct: 498  DYSRVTWVYMLKNKSEVQKYIPDFFAFVKKQFGKEVKAIRSDNAPELF---LSNFYHSLG 554

Query: 209  IIHQTSCVYTPQQNGRVERKHRHLLATSRALRFHSGLPIQFWGDCLLTATYLINRTPSTT 30
            +IH  SCV TPQQN  VERKH+H+L  +RAL F S LP+ +W DC+LTA YLINRTPS  
Sbjct: 555  VIHYRSCVETPQQNSVVERKHQHILNVARALLFXSSLPVCYWSDCILTAVYLINRTPSPF 614

Query: 29   LQGKSPFE 6
            L  K+PFE
Sbjct: 615  LNNKTPFE 622


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  265 bits (678), Expect = 1e-68
 Identities = 150/352 (42%), Positives = 203/352 (57%), Gaps = 6/352 (1%)
 Frame = -3

Query: 1043 WIVDSGATDHIT--AHFTSLINPISCNITLQLPNGHTINVTHIGSVKLDNDLILQQVLCV 870
            WI+DSGA+DHI   + F +   P+  N  ++LP+G + +V+HIG+V      +L  VLCV
Sbjct: 405  WILDSGASDHIVCDSSFLTSFQPVH-NRIVKLPDGTSAHVSHIGTVSFSAQFVLHNVLCV 463

Query: 869  PGFTHNLLSIPKLLSQTKFNVVFSADSCSLQDPTWKRELEIGKLQGGLYVYTPVSSSSNF 690
            P F  NL+SI KL   + +  +F    C +QD           LQ G  +     S   +
Sbjct: 464  PLFYLNLISISKLAFDSFYVTIFLRQVCFIQD-----------LQSGKMIGMGTESEGLY 512

Query: 689  C-NLQEQQTFSSSCNLLKANAH-VWHARLGHVPSSILKQLSFECNS--DFQDCDSCHFAK 522
            C NL  + T    CN++      +WH RLGH  S +     F  N   D   C  C  AK
Sbjct: 513  CLNLPRKGT----CNVVNTKTQDLWHQRLGHPSSKVSVLFPFLQNKTLDVSTCSICPLAK 568

Query: 521  QSKLSFSNSDSCSAALFDLVHADLWGPYSHKTHDNCHYFLTVLEDKSRTTWIFLLNDKSQ 342
             ++  F  S S S + FDL+H D+WG Y   +     YFLT+++D SR+TW++L++ KS+
Sbjct: 569  HTRTPFPLSVSSSDSCFDLIHVDIWGGYHVPSLSGAQYFLTIVDDHSRSTWVYLMHHKSE 628

Query: 341  VPIILKDFFAYVQNQFKTNVKILRTDHGTEFMNKSLSVTLASLGIIHQTSCVYTPQQNGR 162
               +L  F   V NQF + VKI+R+D+G EF +       +S GI+HQTSC+ TPQQNG 
Sbjct: 629  ARSLLVHFVNLVANQFGSQVKIVRSDNGPEFKHTQF---YSSRGILHQTSCINTPQQNGV 685

Query: 161  VERKHRHLLATSRALRFHSGLPIQFWGDCLLTATYLINRTPSTTLQGKSPFE 6
            VERKHRHLL  +RAL F S LP  FWGD +LTA YLINRTP+  LQGK+PFE
Sbjct: 686  VERKHRHLLNVARALLFQSHLPKPFWGDAILTAAYLINRTPTPLLQGKTPFE 737


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