BLASTX nr result

ID: Bupleurum21_contig00006255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006255
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...    92   6e-17
ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002318136.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
           gi|222874093|gb|EEF11224.1| f-box family protein
           [Populus trichocarpa]
          Length = 441

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
 Frame = -1

Query: 270 YRALWNPAINEFKTLPDIICKPDCPAHFTYA-NYDVYGFGFDHASGDYKIVVMKGYW--S 100
           +RA WNPA+NEFK LP +   P+ P++F+Y+  YD YGFG    + DY++VVMK YW   
Sbjct: 154 FRAFWNPAVNEFKFLPPL---PNPPSNFSYSPQYDAYGFGLHPVTKDYEVVVMKDYWREK 210

Query: 99  ASDNSGLKHPVSVLVYTLRTDSWKYCGDLAKAY 1
             +  G ++P+ V VY+  T SW++ GDL++ Y
Sbjct: 211 QEERGGCRYPLRVFVYSSSTGSWRHWGDLSRYY 243


>ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|222836749|gb|EEE75142.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/92 (44%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
 Frame = -1

Query: 270 YRALWNPAINEFKTLPDIICKPDCPAHFTYAN-YDVYGFGFDHASGDYKIVVMKGYWSAS 94
           + ALWNPAINE KTLP I   P+ P  F+Y+  ++ YGF     + D +++VM+ YW   
Sbjct: 157 FHALWNPAINELKTLPPI---PNPPFSFSYSPLWNAYGFRLHPVTKDCEVIVMREYWREE 213

Query: 93  DNSGL-KHPVSVLVYTLRTDSWKYCGDLAKAY 1
           + +   ++P+SV VYTL +DSW+Y GDL++ Y
Sbjct: 214 EGAWEDRYPLSVFVYTLSSDSWRYWGDLSRYY 245


>ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|222858811|gb|EEE96358.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
 Frame = -1

Query: 261 LWNPAINEFKTLPDIIC-KPDCPAHFTYANYDVYGFGFDHASGDYKIVVMKGYWSASDNS 85
           LWNPA  EFK LP+ I  K   P ++     D YGFGFD  + DYK+VV++  ++  +  
Sbjct: 116 LWNPATKEFKLLPEKIRNKSSLPLYYE----DSYGFGFDPVTNDYKVVVIRESYT-REYY 170

Query: 84  GLKHPVS-VLVYTLRTDSWKYCGDLAKAY 1
             K P S V+VYTLRTDSW+  G L + Y
Sbjct: 171 LEKFPSSLVIVYTLRTDSWRCWGSLDQGY 199


>ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
 Frame = -1

Query: 261 LWNPAINEFKTLPDIIC-KPDCPAHFTYANYDVYGFGFDHASGDYKIVVMKGYWSASDNS 85
           LWNPA  EFK LP+ I  K   P ++     D YGFGFD  + DYK+VV++  ++  +  
Sbjct: 116 LWNPATKEFKLLPEKIRNKSSLPLYYE----DSYGFGFDPVTNDYKVVVIRESYT-REYY 170

Query: 84  GLKHPVS-VLVYTLRTDSWKYCGDLAKAY 1
             K P S V+VYTLRTDSW+  G L + Y
Sbjct: 171 LEKFPSSLVIVYTLRTDSWRCWGSLDQGY 199


>ref|XP_002318136.1| predicted protein [Populus trichocarpa] gi|222858809|gb|EEE96356.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
 Frame = -1

Query: 261 LWNPAINEFKTLP-DIICKPDCPAHFTYANYDVYGFGFDHASGDYKIVVMKGYWSASDNS 85
           LWNPA  EFK LP  I  K   P ++     D  GFGFD  + +YK+VV++  ++     
Sbjct: 60  LWNPATKEFKLLPVKIHNKSSLPLYYD----DSSGFGFDPVTNNYKVVVIRESYTREYYL 115

Query: 84  GLKHPVS-VLVYTLRTDSWKYCGDLAKAY 1
             K P S V+VYT RTDSW+  G L + Y
Sbjct: 116 E-KFPSSLVIVYTFRTDSWRCWGSLDQGY 143


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