BLASTX nr result

ID: Bupleurum21_contig00006251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006251
         (1606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30623.3| unnamed protein product [Vitis vinifera]              672   0.0  
ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vit...   669   0.0  
emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]   656   0.0  
ref|XP_002522498.1| Auxin response factor, putative [Ricinus com...   651   0.0  
ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicu...   640   0.0  

>emb|CBI30623.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  672 bits (1734), Expect = 0.0
 Identities = 351/558 (62%), Positives = 405/558 (72%), Gaps = 24/558 (4%)
 Frame = +3

Query: 3    DLNTVNEDDDETTPXXXXXXXXXXXXXX---VPANLTAASPAVCLELWHACAGPLISLPK 173
            DLNTV  DDDET                   V  +L +A+ +VCLELWHACAGPLISLPK
Sbjct: 3    DLNTV--DDDETPSSGSSSSSSSSASASASTVCGSLLSAASSVCLELWHACAGPLISLPK 60

Query: 174  KGSAVVYLPQGHLEYISDFSAVAYDLPPHVFCRVVDVKLHAEAATDEVFAQVSLIPESQI 353
            KGS VVY PQGHLE +SD+ AVAYDLPPHVFCRVVDVKLHAE  TDEV+AQVSL+PE++I
Sbjct: 61   KGSLVVYFPQGHLEQLSDYPAVAYDLPPHVFCRVVDVKLHAEVVTDEVYAQVSLVPETKI 120

Query: 354  ERKWMEGKPEALA-EDEDTDIAAKSVTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL 530
            ++K  EG+ EA   E+ED + + KS+TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL
Sbjct: 121  KQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL 180

Query: 531  DYKQQRPSQELVAKDLHGAEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVCGDAVLFLRG 710
            DYKQQRPSQELVAKDLHG EWRFRHIYRGQPRRHLLTTGWSAFVNKKKLV GDAVLFLRG
Sbjct: 181  DYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRG 240

Query: 711  DDGELRLGIRRAAQVKSGVKSVLAGNQQLN--DIXXXXXXXXXXXXFNLCYNPRSSSSDF 884
             DGELRLGIRRAAQ+K         +QQLN   +            FN+CYNPR+SSS+F
Sbjct: 241  GDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVVNAISTRSVFNICYNPRASSSEF 300

Query: 885  VIPFHKFSRSLTDAFTPGMRFKMRIETDDAAERRCTGLIVGVSDVDPLRWPGSKWRCLMV 1064
            +IP  KFS+S+  +F+ GMRFKMR+ET+DAAERR TGLI G+SD+DP+RWPGSKWRCL+V
Sbjct: 301  IIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGLITGISDMDPVRWPGSKWRCLLV 360

Query: 1065 RWDDMEVTRHNRVSPWEIELSSYISGASGLVSPTMKRSRNGFP-REPDFPVLTDGTGMSD 1241
            RWDD+E  RHNRVSPWEIELS  +SG+  L  P  KR+R G P   PDF V  +G G+SD
Sbjct: 361  RWDDIEANRHNRVSPWEIELSGSLSGSGSLTVPGSKRTRIGLPGTRPDFSV-PNGMGVSD 419

Query: 1242 FRESSRFQKVLQGQEILGFHASFDGVDARKHYPPDLRGCFPGSINWDSTPV-NGARSLIG 1418
            F ESSRFQKVLQGQEI GF+  +DGVD + H+P ++R CFPGS       + NG R+ +G
Sbjct: 420  FGESSRFQKVLQGQEIFGFNTPYDGVDTQDHHPSEIR-CFPGSSCSGIAAIGNGVRNPLG 478

Query: 1419 NSRISYDGVDLCESLRLNKVLQGQETFSKSPHGRSTIVNQMLDNND-------------- 1556
            NS ISY G+   ES R +KVLQGQETF   P GR+   NQ  +N                
Sbjct: 479  NSDISYKGIGFGESFRFHKVLQGQETFPSPPCGRALSANQAHENGSFGIFDGVQVPTSRN 538

Query: 1557 --PGFMQGYNTCGRSSAP 1604
              P  +QGYN     S P
Sbjct: 539  GWPALVQGYNAHTHLSTP 556


>ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
          Length = 740

 Score =  669 bits (1726), Expect = 0.0
 Identities = 352/559 (62%), Positives = 405/559 (72%), Gaps = 25/559 (4%)
 Frame = +3

Query: 3    DLNTVNEDDDETTPXXXXXXXXXXXXXX---VPANLTAASPAVCLELWHACAGPLISLPK 173
            DLNTV  DDDET                   V  +L +A+ +VCLELWHACAGPLISLPK
Sbjct: 6    DLNTV--DDDETPSSGSSSSSSSSASASASTVCGSLLSAASSVCLELWHACAGPLISLPK 63

Query: 174  KGSAVVYLPQGHLEYISDFSAVAYDLPPHVFCRVVDVKLHAEAATDEVFAQVSLIPES-Q 350
            KGS VVY PQGHLE +SD+ AVAYDLPPHVFCRVVDVKLHAE  TDEV+AQVSL+PE+ Q
Sbjct: 64   KGSLVVYFPQGHLEQLSDYPAVAYDLPPHVFCRVVDVKLHAEVVTDEVYAQVSLVPETKQ 123

Query: 351  IERKWMEGKPEALA-EDEDTDIAAKSVTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPP 527
            I++K  EG+ EA   E+ED + + KS+TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPP
Sbjct: 124  IKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPP 183

Query: 528  LDYKQQRPSQELVAKDLHGAEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVCGDAVLFLR 707
            LDYKQQRPSQELVAKDLHG EWRFRHIYRGQPRRHLLTTGWSAFVNKKKLV GDAVLFLR
Sbjct: 184  LDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLR 243

Query: 708  GDDGELRLGIRRAAQVKSGVKSVLAGNQQLN--DIXXXXXXXXXXXXFNLCYNPRSSSSD 881
            G DGELRLGIRRAAQ+K         +QQLN   +            FN+CYNPR+SSS+
Sbjct: 244  GGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVVNAISTRSVFNICYNPRASSSE 303

Query: 882  FVIPFHKFSRSLTDAFTPGMRFKMRIETDDAAERRCTGLIVGVSDVDPLRWPGSKWRCLM 1061
            F+IP  KFS+S+  +F+ GMRFKMR+ET+DAAERR TGLI G+SD+DP+RWPGSKWRCL+
Sbjct: 304  FIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGLITGISDMDPVRWPGSKWRCLL 363

Query: 1062 VRWDDMEVTRHNRVSPWEIELSSYISGASGLVSPTMKRSRNGFP-REPDFPVLTDGTGMS 1238
            VRWDD+E  RHNRVSPWEIELS  +SG+  L  P  KR+R G P   PDF V  +G G+S
Sbjct: 364  VRWDDIEANRHNRVSPWEIELSGSLSGSGSLTVPGSKRTRIGLPGTRPDFSV-PNGMGVS 422

Query: 1239 DFRESSRFQKVLQGQEILGFHASFDGVDARKHYPPDLRGCFPGSINWDSTPV-NGARSLI 1415
            DF ESSRFQKVLQGQEI GF+  +DGVD + H+P ++R CFPGS       + NG R+ +
Sbjct: 423  DFGESSRFQKVLQGQEIFGFNTPYDGVDTQDHHPSEIR-CFPGSSCSGIAAIGNGVRNPL 481

Query: 1416 GNSRISYDGVDLCESLRLNKVLQGQETFSKSPHGRSTIVNQMLDNND------------- 1556
            GNS ISY G+   ES R +KVLQGQETF   P GR+   NQ  +N               
Sbjct: 482  GNSDISYKGIGFGESFRFHKVLQGQETFPSPPCGRALSANQAHENGSFGIFDGVQVPTSR 541

Query: 1557 ---PGFMQGYNTCGRSSAP 1604
               P  +QGYN     S P
Sbjct: 542  NGWPALVQGYNAHTHLSTP 560


>emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
          Length = 831

 Score =  656 bits (1692), Expect = 0.0
 Identities = 351/588 (59%), Positives = 405/588 (68%), Gaps = 54/588 (9%)
 Frame = +3

Query: 3    DLNTVNEDDDETTPXXXXXXXXXXXXXX---VPANLTAASPAVCLELWHACAGPLISLPK 173
            DLNTV  DDDET                   V  +L +A+ +VCLELWHACAGPLISLPK
Sbjct: 6    DLNTV--DDDETPSSGSSSSSSSSASASASTVCGSLLSAASSVCLELWHACAGPLISLPK 63

Query: 174  KGSAVVYLPQGHLEYISDFSAVAYDLPPHVFCRVVDVKLHAEAATDEVFAQVSLIPESQI 353
            KGS VVY PQGHLE +SD+ AVAYDLPPHVFCRVVDVKLHAE  TDEV+AQVSL+PE++I
Sbjct: 64   KGSLVVYFPQGHLEQLSDYPAVAYDLPPHVFCRVVDVKLHAEVVTDEVYAQVSLVPETKI 123

Query: 354  ERKWMEGKPEALA-EDEDTDIAAKSVTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL 530
            ++K  EG+ EA   E+ED + + KS+TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL
Sbjct: 124  KQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL 183

Query: 531  DYKQQRPSQELVAKDLHGAEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVCGDAVLFLRG 710
            DYKQQRPSQELVAKDLHG EWRFRHIYRGQPRRHLLTTGWSAFVNKKKLV GDAVLFLRG
Sbjct: 184  DYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRG 243

Query: 711  DDGELRLGIRRAAQVKSGVKSVLAGNQQ--LNDIXXXXXXXXXXXXFNLCYNPRSSSSDF 884
             DGELRLGIRRAAQ+K         +QQ  LN +            FN+CYNPR+SSS+F
Sbjct: 244  GDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVVNAISTRSVFNICYNPRASSSEF 303

Query: 885  VIPFHKFSRSLTDAFTPGMRFKMRIETDDAAERRCTGLIVGVSDVDPLRWPGSKWRCLM- 1061
            +IP  KFS+S+  +F+ GMRFKMR+ET+DAAERR TGLI G+SD+DP+RWPGSKWRCL+ 
Sbjct: 304  IIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGLITGISDMDPVRWPGSKWRCLLL 363

Query: 1062 -----------------------------VRWDDMEVTRHNRVSPWEIELSSYISGASGL 1154
                                         VRWDD+E  RHNRVSPWEIELS  +SG+  L
Sbjct: 364  HHSHGSECVLLPCLPYYSDSATFFDLSLQVRWDDIEANRHNRVSPWEIELSGSLSGSGSL 423

Query: 1155 VSPTMKRSRNGFP-REPDFPVLTDGTGMSDFRESSRFQKVLQGQEILGFHASFDGVDARK 1331
              P  KR+R G P   PDF V  +G G+SDF ESSRFQKVLQGQEI GF+  +DGVD + 
Sbjct: 424  TVPGSKRTRIGLPGTRPDFSV-PNGMGVSDFGESSRFQKVLQGQEIFGFNTPYDGVDTQD 482

Query: 1332 HYPPDLRGCFPGSINWDSTPV-NGARSLIGNSRISYDGVDLCESLRLNKVLQGQETFSKS 1508
            H+P ++R CFPGS       + NG R+ +GNS ISY G+   ES R +KVLQGQETF   
Sbjct: 483  HHPSEIR-CFPGSSCSRIAAIGNGVRNPLGNSDISYKGIGFGESFRFHKVLQGQETFPSP 541

Query: 1509 PHGRSTIVNQMLDNND----------------PGFMQGYNTCGRSSAP 1604
            P GR+   NQ  +N                  P  +QGYN     S P
Sbjct: 542  PCGRALSANQAHENGSFGIFDGVQVPTSRNGWPALVQGYNAHTHLSTP 589


>ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
            gi|223538189|gb|EEF39798.1| Auxin response factor,
            putative [Ricinus communis]
          Length = 730

 Score =  651 bits (1679), Expect = 0.0
 Identities = 344/555 (61%), Positives = 396/555 (71%), Gaps = 28/555 (5%)
 Frame = +3

Query: 3    DLNTVNEDDDETTPXXXXXXXXXXXXXXVPA----NLTAA--SPAVCLELWHACAGPLIS 164
            DLNT  E+D++TTP                A    NL++A  S +VCLELWHACAGPLIS
Sbjct: 6    DLNTT-EEDEKTTPSSGSFSSPSSSSSTSAALSATNLSSAPVSGSVCLELWHACAGPLIS 64

Query: 165  LPKKGSAVVYLPQGHLEYISDFSAVAYDLPPHVFCRVVDVKLHAEAATDEVFAQVSLIPE 344
            LPKKGS VVY PQGHLE + D     YDLP ++FCRVVDVKLHAE A DEV+AQVSL+P+
Sbjct: 65   LPKKGSVVVYFPQGHLEQLPDLPLAVYDLPSYIFCRVVDVKLHAETANDEVYAQVSLVPD 124

Query: 345  S-QIERKWMEGKPEALAEDEDTDIAAKSVTPHMFCKTLTASDTSTHGGFSVPRRAAEDCF 521
            S QIE+K  +GK E   E+ED +   KS T HMFCKTLTASDTSTHGGFSVPRRAAEDCF
Sbjct: 125  SEQIEQKLKQGKLEGHCEEEDVEAVVKSTTTHMFCKTLTASDTSTHGGFSVPRRAAEDCF 184

Query: 522  PPLDYKQQRPSQELVAKDLHGAEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVCGDAVLF 701
            PPLDY QQRPSQELVAKDLHG EW+FRHIYRGQPRRHLLTTGWSAFVNKKKLV GDAVLF
Sbjct: 185  PPLDYSQQRPSQELVAKDLHGFEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLF 244

Query: 702  LRGDDGELRLGIRRAAQVKSGVKSVLAGNQQLND--IXXXXXXXXXXXXFNLCYNPRSSS 875
            LRGDDGELRLGIRRAAQVK G       +QQLN   +            FN+CYNPR+SS
Sbjct: 245  LRGDDGELRLGIRRAAQVKCGASFPALCSQQLNQSTLTDVVHAMSMRSLFNICYNPRASS 304

Query: 876  SDFVIPFHKFSRSLTDAFTPGMRFKMRIETDDAAERRCTGLIVGVSDVDPLRWPGSKWRC 1055
            S+F+IP HKF +SL  +F+ GMRFKMR ET+DAAERR  GLI G+SD+DP RWPGSKWRC
Sbjct: 305  SEFIIPLHKFLKSLDYSFSVGMRFKMRFETEDAAERRYMGLITGISDLDPARWPGSKWRC 364

Query: 1056 LMVRWDDMEVTRHNRVSPWEIELSSYISGASGLVSPTMKRSRNGFP-REPDFPVLTDGTG 1232
            L+VRWDDME  RH+RVSPWEIE S  +S  +  ++P +KRSR+GFP  +P+FPV  DG G
Sbjct: 365  LVVRWDDMETNRHSRVSPWEIEPSGSVSSCNSFMTPGLKRSRSGFPSSKPEFPV-PDGIG 423

Query: 1233 MSDFRESSRFQKVLQGQEILGFHASFDGVDARKHYPPDLRGCFPGS-INWDSTPVNGARS 1409
             SDF E SRFQKVLQGQEIL F+  +DGVD  +H P D+R CFPGS  +  +T  NGAR 
Sbjct: 424  ASDFGEPSRFQKVLQGQEILNFNTLYDGVDQNRH-PSDIRRCFPGSRSSMIATTRNGARD 482

Query: 1410 LIGNSRISYDGVDLCESLRLNKVLQGQETFSKSPHGRS-TIVNQMLDNNDPG-------- 1562
             + NS +SY  +   ESLR +KVLQGQE    SP GR+    N+  +N   G        
Sbjct: 483  PVVNSDVSYKSIGFSESLRFHKVLQGQEIIPSSPFGRAPASTNEACENGCFGISDGVQMT 542

Query: 1563 --------FMQGYNT 1583
                     MQGYNT
Sbjct: 543  SSRNGWSSMMQGYNT 557


>ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum]
            gi|85069277|gb|ABC69710.1| auxin response factor 3
            [Solanum lycopersicum]
          Length = 747

 Score =  640 bits (1652), Expect = 0.0
 Identities = 328/535 (61%), Positives = 399/535 (74%), Gaps = 11/535 (2%)
 Frame = +3

Query: 3    DLNTVNEDD--DETTPXXXXXXXXXXXXXXVPANLTAASP----AVCLELWHACAGPLIS 164
            DLNTV+ DD  +ETT                 ++LT+++     +VC+ELWHACAGPLIS
Sbjct: 7    DLNTVDNDDAGEETTAPVSLDSPASSSAASGSSDLTSSTTPAVASVCMELWHACAGPLIS 66

Query: 165  LPKKGSAVVYLPQGHLEYISDFSAVAYDLPPHVFCRVVDVKLHAEAATDEVFAQVSLIPE 344
            LPKKGSAVVYLPQGHLE++S++ ++A +LPPHVFCRVVDVKL A+AATDEV+AQVSL+P+
Sbjct: 67   LPKKGSAVVYLPQGHLEHLSEYPSIACNLPPHVFCRVVDVKLQADAATDEVYAQVSLVPD 126

Query: 345  SQ-IERKWMEGKPEALAEDEDTDIAAKSVTPHMFCKTLTASDTSTHGGFSVPRRAAEDCF 521
            +Q IE+KW +G  +A  E+E+ + A KS+TPHMFCKTLTASDTSTHGGFSVPRRAAEDCF
Sbjct: 127  NQQIEQKWKDGDIDADIEEEEIEGAGKSITPHMFCKTLTASDTSTHGGFSVPRRAAEDCF 186

Query: 522  PPLDYKQQRPSQELVAKDLHGAEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVCGDAVLF 701
             PLDY+QQRPSQELVAKDLHG EW+FRHIYRGQPRRHLLTTGWSAFVNKKKLV GDAVLF
Sbjct: 187  APLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLF 246

Query: 702  LRGDDGELRLGIRRAAQVKSGVKSVLAGNQQLN--DIXXXXXXXXXXXXFNLCYNPRSSS 875
            LR  DGELRLG+RRAAQ K+    +   ++ LN   I            FN+CYNPR SS
Sbjct: 247  LRTGDGELRLGVRRAAQAKTCSSYLAPCSKPLNVSGIVDAVNVISSRNAFNICYNPRDSS 306

Query: 876  SDFVIPFHKFSRSLTDAFTPGMRFKMRIETDDAAERRCTGLIVGVSDVDPLRWPGSKWRC 1055
            SDF++P+HKFS++L   F+ GMRFKMR+ET+DAAE+R TGL+VGVS+VDP+RWPGSKWRC
Sbjct: 307  SDFIVPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSNVDPVRWPGSKWRC 366

Query: 1056 LMVRWDDMEVTRHNRVSPWEIELSSYISGASGLVSPTMKRSRNGFP-REPDFPVLTDGTG 1232
            L+VRWDD++V+RHNRVSPWEIE S      S LV P+ KR+R GFP  + DFP+  +G  
Sbjct: 367  LLVRWDDLDVSRHNRVSPWEIEPSGSAPVPSSLVMPSAKRTRVGFPISKADFPIPREGIA 426

Query: 1233 MSDFRESSRFQKVLQGQEILGFHASFDGVDARKHYPPDLRGCFPG-SINWDSTPVNGARS 1409
            +SDF E SRFQKVLQGQEIL  HA + G+DAR   P   R CFPG   +  S   N  R 
Sbjct: 427  VSDFGEPSRFQKVLQGQEILRMHAPYGGLDARSPRPAGTR-CFPGFPSSGISRMGNSIRP 485

Query: 1410 LIGNSRISYDGVDLCESLRLNKVLQGQETFSKSPHGRSTIVNQMLDNNDPGFMQG 1574
            L G++  S++ +   ESLR NKVLQGQE F+  P+GR+    QM + +  G   G
Sbjct: 486  LFGDTDKSHESIGFSESLRFNKVLQGQEIFTSPPYGRAQAGIQMQEKSRTGIFVG 540


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