BLASTX nr result

ID: Bupleurum21_contig00006250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006250
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94047.1| unknown [Populus trichocarpa]                          381   e-103
ref|XP_002276942.1| PREDICTED: 5'-nucleotidase surE [Vitis vinif...   380   e-103
ref|XP_002327441.1| predicted protein [Populus trichocarpa] gi|2...   379   e-103
ref|XP_002329066.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
ref|XP_004146815.1| PREDICTED: 5'-nucleotidase SurE-like [Cucumi...   376   e-102

>gb|ABK94047.1| unknown [Populus trichocarpa]
          Length = 394

 Score =  381 bits (978), Expect = e-103
 Identities = 192/289 (66%), Positives = 231/289 (79%), Gaps = 18/289 (6%)
 Frame = -3

Query: 865 KMSNRLPPGLVSNLQQVLSNRK-----EERQEEEDSNTEHSDNV-------------DDD 740
           K +N LPPGLVSNLQQVL +RK     EE ++E D + + +D               +D 
Sbjct: 5   KNNNMLPPGLVSNLQQVLLSRKGGGGEEEEKKEIDPSNDGNDKSAEPSTTTCVENTEEDS 64

Query: 739 NSDKPIVFVTNADGIESPGLKYLVQQLVAQGLYNVYVCAPQSEKSLSGHSVTVGESVAVS 560
           N+ KPIV VTN DGI+SPGL  LV+ LV +GLYNV+VCAPQS+KS+S HSVT+ E++AV+
Sbjct: 65  NNSKPIVLVTNGDGIDSPGLVSLVEALVREGLYNVHVCAPQSDKSVSSHSVTLHEAIAVT 124

Query: 559 SAEMDGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGVHKGSSCGHNMFYSGAVASV 380
           S E++GA AYEVSGTPVDCVSLALSGALFSWSKPLLVISG+++GS+CGH+M YSG VA  
Sbjct: 125 SVEINGAIAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSNCGHHMIYSGVVAGA 184

Query: 379 REALINGVPSMSISLNWKKDESQESDLKDAVSVCLPLINAATRDIEKGDFPKCCSLNVDV 200
           REAL  GVPS+SISLNWKK+ESQESD KDAV+VCLP+INAA RDIEKG FPK CSLN+++
Sbjct: 185 REALFCGVPSLSISLNWKKEESQESDFKDAVAVCLPVINAAIRDIEKGFFPKSCSLNIEI 244

Query: 199 PTSPLKNKGFKSTIKSLWRSAPSWLAISASRQPSAARFMSNQQSLGMQL 53
           PTSP  NKGFK T +S+WRS+PSW A+SA+R PSA  FMSNQQSLG+QL
Sbjct: 245 PTSPSANKGFKLTKRSMWRSSPSWQAVSANRHPSAGHFMSNQQSLGLQL 293


>ref|XP_002276942.1| PREDICTED: 5'-nucleotidase surE [Vitis vinifera]
           gi|297743037|emb|CBI35904.3| unnamed protein product
           [Vitis vinifera]
          Length = 384

 Score =  380 bits (975), Expect = e-103
 Identities = 195/278 (70%), Positives = 225/278 (80%), Gaps = 9/278 (3%)
 Frame = -3

Query: 859 SNRLPPGLVSNLQQVLSNRK------EERQEEEDSNTEHSDNVD---DDNSDKPIVFVTN 707
           +N LPPGLVSNLQ+VL NRK        +  +E +    SD V+   D    KP+V VTN
Sbjct: 7   NNFLPPGLVSNLQEVLLNRKGGSENDPSKSNDESTQPSSSDAVEANSDTECSKPVVLVTN 66

Query: 706 ADGIESPGLKYLVQQLVAQGLYNVYVCAPQSEKSLSGHSVTVGESVAVSSAEMDGATAYE 527
           ADGIE+PGL +LV+ LV  GL NV+VCAPQS+KS+SGHSVT+ E+VAV+SAE++GATAYE
Sbjct: 67  ADGIEAPGLNFLVEALVRDGLCNVHVCAPQSDKSVSGHSVTLRETVAVTSAEINGATAYE 126

Query: 526 VSGTPVDCVSLALSGALFSWSKPLLVISGVHKGSSCGHNMFYSGAVASVREALINGVPSM 347
           VSGTPVDCVSLALSGALFSWSKPLLVISG+++GSSCGH+MFYSG VA  REAL  GVPSM
Sbjct: 127 VSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALFCGVPSM 186

Query: 346 SISLNWKKDESQESDLKDAVSVCLPLINAATRDIEKGDFPKCCSLNVDVPTSPLKNKGFK 167
           SISLNWKKDESQESD KDAV+VCLPLINAA RDIEKG FPK C LN+++P SPL NKGFK
Sbjct: 187 SISLNWKKDESQESDFKDAVTVCLPLINAAIRDIEKGVFPKSCLLNIEIPASPLTNKGFK 246

Query: 166 STIKSLWRSAPSWLAISASRQPSAARFMSNQQSLGMQL 53
            T +SLWRS PSW A+S +R P  A FMSNQQSLG+QL
Sbjct: 247 LTKQSLWRSTPSWQAVSTNRHP--AGFMSNQQSLGIQL 282


>ref|XP_002327441.1| predicted protein [Populus trichocarpa] gi|222835995|gb|EEE74416.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  379 bits (972), Expect = e-103
 Identities = 189/286 (66%), Positives = 234/286 (81%), Gaps = 17/286 (5%)
 Frame = -3

Query: 859 SNRLPPGLVSNLQQVLSNRK-----EER-----QEEEDSNTEHSDNV-------DDDNSD 731
           +N LPPGLVSNLQQVL +RK     EE+      ++ D +TE S +        +D+N+ 
Sbjct: 6   NNLLPPGLVSNLQQVLLSRKGGGGGEEKGSDLSNDDNDQSTESSTSACVENTEEEDNNNS 65

Query: 730 KPIVFVTNADGIESPGLKYLVQQLVAQGLYNVYVCAPQSEKSLSGHSVTVGESVAVSSAE 551
           KP+V VTN DGI+SPGL +LV+ LV +GL NV+VCAPQS+KS+S HSVT+ E++A +SAE
Sbjct: 66  KPVVLVTNGDGIDSPGLLFLVEALVREGLCNVHVCAPQSDKSVSSHSVTLQETIAATSAE 125

Query: 550 MDGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGVHKGSSCGHNMFYSGAVASVREA 371
           ++GA AYE+SGTPVDCVSLALSGALFSWSKPLLVISG+++GS+CG++MFYSG VA  REA
Sbjct: 126 INGAVAYEISGTPVDCVSLALSGALFSWSKPLLVISGINRGSNCGYHMFYSGVVAGAREA 185

Query: 370 LINGVPSMSISLNWKKDESQESDLKDAVSVCLPLINAATRDIEKGDFPKCCSLNVDVPTS 191
           LI GVPS+SISLNWKKDESQ+SD KDAV+VCLP+INAA RDIEKG FP+ CSLN+++PTS
Sbjct: 186 LICGVPSLSISLNWKKDESQDSDFKDAVAVCLPVINAAIRDIEKGFFPQSCSLNIEIPTS 245

Query: 190 PLKNKGFKSTIKSLWRSAPSWLAISASRQPSAARFMSNQQSLGMQL 53
           P  NKGFK T +S+WRS+PSW A+SA+R PSA  FMSNQQSLG+QL
Sbjct: 246 PSTNKGFKLTRRSMWRSSPSWQAVSANRHPSAGHFMSNQQSLGLQL 291


>ref|XP_002329066.1| predicted protein [Populus trichocarpa] gi|222839737|gb|EEE78060.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score =  377 bits (969), Expect = e-102
 Identities = 190/284 (66%), Positives = 228/284 (80%), Gaps = 18/284 (6%)
 Frame = -3

Query: 850 LPPGLVSNLQQVLSNRK-----EERQEEEDSNTEHSDNV-------------DDDNSDKP 725
           LPPGLVSNLQQVL +RK     EE ++E D + + +D               +D N+ KP
Sbjct: 2   LPPGLVSNLQQVLLSRKGGGGEEEEKKEIDPSNDGNDKSAEPSTSTCVENTEEDSNNSKP 61

Query: 724 IVFVTNADGIESPGLKYLVQQLVAQGLYNVYVCAPQSEKSLSGHSVTVGESVAVSSAEMD 545
           IV VTN DGI+SPGL  LV+ LV +GLYNV+VCAPQS+KS+S HSVT+ E++AV+S E++
Sbjct: 62  IVLVTNGDGIDSPGLVSLVEALVREGLYNVHVCAPQSDKSVSSHSVTLHEAIAVTSVEIN 121

Query: 544 GATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGVHKGSSCGHNMFYSGAVASVREALI 365
           GA AYEVSGTPVDCVSLALSGALFSWSKPLLVISG+++GS+CGH+M YSG VA  REAL 
Sbjct: 122 GAIAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSNCGHHMIYSGVVAGAREALF 181

Query: 364 NGVPSMSISLNWKKDESQESDLKDAVSVCLPLINAATRDIEKGDFPKCCSLNVDVPTSPL 185
            GVPS+SISLNWKK+ESQESD KDAV+VCLP+INAA RDIEKG FPK CSLN+++PTSP 
Sbjct: 182 CGVPSLSISLNWKKEESQESDFKDAVAVCLPVINAAIRDIEKGFFPKSCSLNIEIPTSPS 241

Query: 184 KNKGFKSTIKSLWRSAPSWLAISASRQPSAARFMSNQQSLGMQL 53
            NKGFK T +S+WRS+PSW A+SA+R PSA  FMSNQQSLG+QL
Sbjct: 242 ANKGFKLTKRSMWRSSPSWQAVSANRHPSAGHFMSNQQSLGLQL 285


>ref|XP_004146815.1| PREDICTED: 5'-nucleotidase SurE-like [Cucumis sativus]
           gi|449476647|ref|XP_004154795.1| PREDICTED:
           5'-nucleotidase SurE-like [Cucumis sativus]
          Length = 388

 Score =  376 bits (966), Expect = e-102
 Identities = 191/279 (68%), Positives = 229/279 (82%), Gaps = 11/279 (3%)
 Frame = -3

Query: 856 NRLPPGLVSNLQQVLSNRK------EERQEEEDSNTEHSDNVDDDN-----SDKPIVFVT 710
           N LPPGLVSNL+ VL +RK      EE ++  +++   S +  D N     + KP++ VT
Sbjct: 10  NFLPPGLVSNLEDVLRSRKGPGERGEESKDVNNASPHPSSSTSDANLEVSATQKPVILVT 69

Query: 709 NADGIESPGLKYLVQQLVAQGLYNVYVCAPQSEKSLSGHSVTVGESVAVSSAEMDGATAY 530
           N++GI+SPGL YLV+ LV +G YNV+VCAPQS+KS+S HSVT+ E+VAVSSAE++GATAY
Sbjct: 70  NSEGIDSPGLTYLVEGLVREGSYNVHVCAPQSDKSVSSHSVTLRETVAVSSAEINGATAY 129

Query: 529 EVSGTPVDCVSLALSGALFSWSKPLLVISGVHKGSSCGHNMFYSGAVASVREALINGVPS 350
           EVSGTPVDCVSLALSGALFSWSKPLLVISG+++GSSCGH MFYSG VA  REALI GVPS
Sbjct: 130 EVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHQMFYSGVVAGAREALICGVPS 189

Query: 349 MSISLNWKKDESQESDLKDAVSVCLPLINAATRDIEKGDFPKCCSLNVDVPTSPLKNKGF 170
           +SISLNWKKD+SQESD KDAVSVCLPLINAA  DIEKG+FPK CSLN+++PTSP+ NKGF
Sbjct: 190 ISISLNWKKDQSQESDFKDAVSVCLPLINAAISDIEKGNFPKSCSLNIEIPTSPMTNKGF 249

Query: 169 KSTIKSLWRSAPSWLAISASRQPSAARFMSNQQSLGMQL 53
           KST +SLWRS  +W A+SA+R P A  FMSNQQSLG+QL
Sbjct: 250 KSTKQSLWRSTLNWQAVSANRYP-AGHFMSNQQSLGLQL 287


Top