BLASTX nr result

ID: Bupleurum21_contig00006248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006248
         (2167 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631537.1| PREDICTED: F-box/LRR-repeat protein 10-like ...   700   0.0  
ref|XP_002529805.1| ubiquitin-protein ligase, putative [Ricinus ...   695   0.0  
ref|XP_003631565.1| PREDICTED: F-box/LRR-repeat protein 10-like ...   692   0.0  
ref|XP_002312937.1| f-box family protein [Populus trichocarpa] g...   682   0.0  
ref|XP_003555849.1| PREDICTED: F-box/LRR-repeat protein 10-like ...   677   0.0  

>ref|XP_003631537.1| PREDICTED: F-box/LRR-repeat protein 10-like [Vitis vinifera]
          Length = 719

 Score =  700 bits (1807), Expect = 0.0
 Identities = 353/483 (73%), Positives = 406/483 (84%)
 Frame = -1

Query: 2167 TLILMFDVSIFLRPNFARVWPLASAKLTCLEIGYISSVMVTELLSPTLGPQQSPSQTQFS 1988
            TL LMFD+S+F R NFAR W LAS  LT LEIGY+SSVMVTELLSP +GP Q P+  Q S
Sbjct: 159  TLSLMFDISLFPRYNFARAWSLASENLTSLEIGYVSSVMVTELLSPNVGPHQPPNHLQPS 218

Query: 1987 VLPNIQKLWLAVDYITDTMIGTISKSLVSLIHLDLRDAPIIEPSVTFDLTNSGLQLINPH 1808
            +LP++Q+L L+VDYITDTM+ T+SK L++L HLDLRDAPIIEP VTFDLTNSG Q IN  
Sbjct: 219  ILPSLQRLCLSVDYITDTMVETVSKCLINLTHLDLRDAPIIEPRVTFDLTNSGFQQINQR 278

Query: 1807 GKLKHLSLIRSQEFVVTSFKRVNDLGVLLMADRCASMESICLGGFCRVTDTGFKTILHSC 1628
            GKLKHLSL+RSQEF++T FKRVNDLG+LLMADRC+SMESICLGGFCRVTD+GFKTILHSC
Sbjct: 279  GKLKHLSLVRSQEFLITYFKRVNDLGILLMADRCSSMESICLGGFCRVTDSGFKTILHSC 338

Query: 1627 SSLYKFKVSHGSQLTDLVFHDINATSLALTHVSLRWCNLLTNLAFIRLASNRNLSVLDLR 1448
            S+LYK +VSHG  LT+LVF DI+ATSL+LTHVSLRWCNLL N A I LASN +L VLDLR
Sbjct: 339  STLYKLRVSHGMLLTNLVFLDISATSLSLTHVSLRWCNLLRNQAVISLASNLDLRVLDLR 398

Query: 1447 DCRNLGDSALKAIGTLCKLKTLLLDGSDISFSGLSYLKENVMNSIVSLSLRGCKRLTDKC 1268
            DCRNLGD AL+AI TL KLK LLLDGSDI+ +GLSYL+E V+ S+VSLS+RGCKRLTDKC
Sbjct: 399  DCRNLGDEALQAISTLHKLKILLLDGSDITDAGLSYLREGVIGSLVSLSIRGCKRLTDKC 458

Query: 1267 ISLLFDGFASKELKELDLSNLPNLSDATVLLLAKSRIQIVELRMRQCPLIGDTSVMALAS 1088
            IS LFD  + +EL+ELDLSNLPNLSD  +  LAKSR+ I+ELRMRQCPLIGDTS+MALAS
Sbjct: 459  ISALFDPSSKQELQELDLSNLPNLSDNGIFSLAKSRVPILELRMRQCPLIGDTSIMALAS 518

Query: 1087 MQADDDCWRGSSLQLLDLFNCGAITPLSFRWLKKPYFPRLRWLGVTGIVNRDLVDALTRS 908
            MQ DD    GSSL++LDL+NCG IT LSFRWLK PYFPRLRWLGVTG VNRD+VDAL RS
Sbjct: 519  MQVDDHRSHGSSLRVLDLYNCGGITSLSFRWLKNPYFPRLRWLGVTGSVNRDMVDALARS 578

Query: 907  RPFLHVSFRGEELGTNQWDNSDDVYMHDYEEVDELEQWLLDDDNESADENMEDAAIVGEV 728
            RPFLHV+  GEELGT+ WD    +YMHD EE+DELEQWLL+  +ES DE ME+    GE+
Sbjct: 579  RPFLHVACHGEELGTDHWDG---LYMHDNEEMDELEQWLLEGGDESDDEEMEEVENNGEM 635

Query: 727  *LS 719
             +S
Sbjct: 636  TVS 638


>ref|XP_002529805.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223530716|gb|EEF32587.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 643

 Score =  695 bits (1793), Expect = 0.0
 Identities = 345/475 (72%), Positives = 401/475 (84%)
 Frame = -1

Query: 2164 LILMFDVSIFLRPNFARVWPLASAKLTCLEIGYISSVMVTELLSPTLGPQQSPSQTQFSV 1985
            L LMFDVS+FLR NF RVW LAS KLT LEIGYISSVMVTELL+P++GP QS +  + S+
Sbjct: 165  LTLMFDVSLFLRHNFTRVWALASEKLTSLEIGYISSVMVTELLTPSVGPHQSLNHIRPSI 224

Query: 1984 LPNIQKLWLAVDYITDTMIGTISKSLVSLIHLDLRDAPIIEPSVTFDLTNSGLQLINPHG 1805
            LP IQKL L+VDYITDTM+GTISK L+ L HLDLRD P+IEP +TFDLTNSGLQ IN +G
Sbjct: 225  LPGIQKLSLSVDYITDTMVGTISKGLMFLTHLDLRDTPLIEPRITFDLTNSGLQQINQYG 284

Query: 1804 KLKHLSLIRSQEFVVTSFKRVNDLGVLLMADRCASMESICLGGFCRVTDTGFKTILHSCS 1625
            KL+HLSL RSQEFV+T F+RVNDLG+LLMAD CASMESICLGGFC+VTDTGFKTILHSCS
Sbjct: 285  KLRHLSLFRSQEFVITYFRRVNDLGILLMADNCASMESICLGGFCQVTDTGFKTILHSCS 344

Query: 1624 SLYKFKVSHGSQLTDLVFHDINATSLALTHVSLRWCNLLTNLAFIRLASNRNLSVLDLRD 1445
            SL++ +VS G  LTDLVFHD++ATSL L+HV LRWCNLLTN A   L +N +L VLDLRD
Sbjct: 345  SLHRLRVSRGIHLTDLVFHDMSATSLCLSHVCLRWCNLLTNYAIKNLVANTHLKVLDLRD 404

Query: 1444 CRNLGDSALKAIGTLCKLKTLLLDGSDISFSGLSYLKENVMNSIVSLSLRGCKRLTDKCI 1265
            C+NLGD +L+AI TL +LK LLLDGS IS SGLS L+  V++S+VSLS+RGCKRLTDKCI
Sbjct: 405  CKNLGDESLRAISTLFELKILLLDGSGISDSGLSNLRGRVISSLVSLSVRGCKRLTDKCI 464

Query: 1264 SLLFDGFASKELKELDLSNLPNLSDATVLLLAKSRIQIVELRMRQCPLIGDTSVMALASM 1085
            S LF+G +  EL+ELD+SNLPNLSD  +L LAKSR+ I  LRMRQCPLIGDTSVMALASM
Sbjct: 465  SALFEGASKLELQELDISNLPNLSDNGILCLAKSRLPISALRMRQCPLIGDTSVMALASM 524

Query: 1084 QADDDCWRGSSLQLLDLFNCGAITPLSFRWLKKPYFPRLRWLGVTGIVNRDLVDALTRSR 905
            Q D+D   GSSL+LLD++NCG IT L+FRWLKKPYFPRLRWLGVTG VNRD++DAL R+R
Sbjct: 525  QVDEDRGHGSSLRLLDIYNCGGITQLAFRWLKKPYFPRLRWLGVTGSVNRDIIDALARNR 584

Query: 904  PFLHVSFRGEELGTNQWDNSDDVYMHDYEEVDELEQWLLDDDNESADENMEDAAI 740
            PFLHV+   EELG +QWDNSD +YMHDY+EVDELEQWLL+ + E+ DE M DA I
Sbjct: 585  PFLHVACHAEELGIDQWDNSDSLYMHDYDEVDELEQWLLEGEFENNDEEMVDAEI 639


>ref|XP_003631565.1| PREDICTED: F-box/LRR-repeat protein 10-like [Vitis vinifera]
          Length = 640

 Score =  692 bits (1786), Expect = 0.0
 Identities = 350/483 (72%), Positives = 404/483 (83%), Gaps = 3/483 (0%)
 Frame = -1

Query: 2167 TLILMFDVSIFLRPNFARVWPLASAKLTCLEI---GYISSVMVTELLSPTLGPQQSPSQT 1997
            TL LMFD+S+F R NFAR W LAS  LT LEI   GY+SSVMVTELLSP +GP Q P+  
Sbjct: 159  TLSLMFDISLFPRYNFARAWSLASKNLTSLEIAYIGYVSSVMVTELLSPNVGPHQPPNHL 218

Query: 1996 QFSVLPNIQKLWLAVDYITDTMIGTISKSLVSLIHLDLRDAPIIEPSVTFDLTNSGLQLI 1817
            + S+LP++Q+L L+VDYITDTM+ T+SK L++L HLDLRDAPIIEP VTFDLTNSG Q I
Sbjct: 219  RPSILPSLQRLCLSVDYITDTMVETVSKCLINLTHLDLRDAPIIEPRVTFDLTNSGFQQI 278

Query: 1816 NPHGKLKHLSLIRSQEFVVTSFKRVNDLGVLLMADRCASMESICLGGFCRVTDTGFKTIL 1637
            N  GKLKHLSL+RSQEF++T FKRVNDLG+LLMADRC+SMESICLGGFCRVTD+GFKTIL
Sbjct: 279  NQRGKLKHLSLVRSQEFLITYFKRVNDLGILLMADRCSSMESICLGGFCRVTDSGFKTIL 338

Query: 1636 HSCSSLYKFKVSHGSQLTDLVFHDINATSLALTHVSLRWCNLLTNLAFIRLASNRNLSVL 1457
            HSCS+LYK +VSHG  LT+LVF DI+ATSL+LTHVSLRWCNLL N A I LASN +L VL
Sbjct: 339  HSCSTLYKLRVSHGMLLTNLVFLDISATSLSLTHVSLRWCNLLRNQAVISLASNLDLRVL 398

Query: 1456 DLRDCRNLGDSALKAIGTLCKLKTLLLDGSDISFSGLSYLKENVMNSIVSLSLRGCKRLT 1277
            DLRDCRNLGD AL+AI TL KLK LLLDGSDI+ +GLSYL+E V+ S+VSLS+RGCKRLT
Sbjct: 399  DLRDCRNLGDEALQAISTLHKLKILLLDGSDITDAGLSYLREGVIGSLVSLSIRGCKRLT 458

Query: 1276 DKCISLLFDGFASKELKELDLSNLPNLSDATVLLLAKSRIQIVELRMRQCPLIGDTSVMA 1097
            DKCIS LFD  + +EL+ELDLSNLPNLSD  +  LAKSR+ I+ELRMRQCPLIGD+S+MA
Sbjct: 459  DKCISALFDPSSKQELQELDLSNLPNLSDNGIFSLAKSRVPILELRMRQCPLIGDSSIMA 518

Query: 1096 LASMQADDDCWRGSSLQLLDLFNCGAITPLSFRWLKKPYFPRLRWLGVTGIVNRDLVDAL 917
            LASMQ DD    GSSL++LDL+NCG IT LSFRWLK PYFPRLRWLGVTG VNRD+VDAL
Sbjct: 519  LASMQVDDHRSHGSSLRVLDLYNCGGITSLSFRWLKNPYFPRLRWLGVTGSVNRDMVDAL 578

Query: 916  TRSRPFLHVSFRGEELGTNQWDNSDDVYMHDYEEVDELEQWLLDDDNESADENMEDAAIV 737
             RSRPFLHV+  GEELGT+ WD    +YMHD EE+DELEQWLL+  +ES DE ME+    
Sbjct: 579  ARSRPFLHVACHGEELGTDHWDG---LYMHDNEEMDELEQWLLEGGDESDDEEMEEVENN 635

Query: 736  GEV 728
            GE+
Sbjct: 636  GEI 638


>ref|XP_002312937.1| f-box family protein [Populus trichocarpa]
            gi|222849345|gb|EEE86892.1| f-box family protein [Populus
            trichocarpa]
          Length = 644

 Score =  682 bits (1761), Expect = 0.0
 Identities = 342/473 (72%), Positives = 395/473 (83%)
 Frame = -1

Query: 2164 LILMFDVSIFLRPNFARVWPLASAKLTCLEIGYISSVMVTELLSPTLGPQQSPSQTQFSV 1985
            LILMFDVS+FLR NFA VW L S KLT LEIGY+SSVMVTEL+ P+LGP QSP+  + S+
Sbjct: 161  LILMFDVSLFLRHNFALVWALVSEKLTSLEIGYVSSVMVTELVGPSLGPHQSPNHVRPSI 220

Query: 1984 LPNIQKLWLAVDYITDTMIGTISKSLVSLIHLDLRDAPIIEPSVTFDLTNSGLQLINPHG 1805
            LP IQKL L+VDYITDTM+ TISK L+SL HLDLRDAP+IEP++TFDLTNSGLQ IN HG
Sbjct: 221  LPGIQKLCLSVDYITDTMVSTISKGLMSLTHLDLRDAPLIEPTITFDLTNSGLQQINQHG 280

Query: 1804 KLKHLSLIRSQEFVVTSFKRVNDLGVLLMADRCASMESICLGGFCRVTDTGFKTILHSCS 1625
            KLKHLSL+RSQEF +T F+RVNDLG+LLMAD+C +MESICLGGFCRVTDTGFKTILHSCS
Sbjct: 281  KLKHLSLVRSQEFAITYFRRVNDLGMLLMADKCENMESICLGGFCRVTDTGFKTILHSCS 340

Query: 1624 SLYKFKVSHGSQLTDLVFHDINATSLALTHVSLRWCNLLTNLAFIRLASNRNLSVLDLRD 1445
            SLYK +VS+G  LTDLVFHDI+ATSL+L HVSLRWCNLLTN A   L  N  L VLDLRD
Sbjct: 341  SLYKLQVSYGIHLTDLVFHDISATSLSLIHVSLRWCNLLTNHAIKNLVLNTRLRVLDLRD 400

Query: 1444 CRNLGDSALKAIGTLCKLKTLLLDGSDISFSGLSYLKENVMNSIVSLSLRGCKRLTDKCI 1265
            C++ GD AL+AI  L +LK LLLDGS+IS  GLSYL+  ++NS+VSLS+RGCKRLTDKCI
Sbjct: 401  CKHFGDEALRAISALLELKILLLDGSNISDFGLSYLR-GIINSLVSLSVRGCKRLTDKCI 459

Query: 1264 SLLFDGFASKELKELDLSNLPNLSDATVLLLAKSRIQIVELRMRQCPLIGDTSVMALASM 1085
            S LF+G +  +L++LDLSNLPNLSD  VL LAK R+ I ELRMRQCPLIGDTSVMALASM
Sbjct: 460  SALFEGSSKLKLQQLDLSNLPNLSDNGVLALAKCRVPISELRMRQCPLIGDTSVMALASM 519

Query: 1084 QADDDCWRGSSLQLLDLFNCGAITPLSFRWLKKPYFPRLRWLGVTGIVNRDLVDALTRSR 905
            + D+D   G SL+LLDL+NCG IT LSFRWLKKPYFPRLR LGVTG  +RD++DAL RSR
Sbjct: 520  RVDEDRLHGCSLRLLDLYNCGGITQLSFRWLKKPYFPRLRCLGVTGSASRDIIDALARSR 579

Query: 904  PFLHVSFRGEELGTNQWDNSDDVYMHDYEEVDELEQWLLDDDNESADENMEDA 746
            PFLHV+   EELG+NQWDN   +YMHD +EVDELEQWLL+++    DE M DA
Sbjct: 580  PFLHVACHAEELGSNQWDNLHGLYMHDNDEVDELEQWLLEEEGGYNDEEMMDA 632


>ref|XP_003555849.1| PREDICTED: F-box/LRR-repeat protein 10-like [Glycine max]
          Length = 637

 Score =  677 bits (1746), Expect = 0.0
 Identities = 345/473 (72%), Positives = 396/473 (83%)
 Frame = -1

Query: 2164 LILMFDVSIFLRPNFARVWPLASAKLTCLEIGYISSVMVTELLSPTLGPQQSPSQTQFSV 1985
            LILMFDVS+FLR NFARVW  AS KLT LEIGYISSV VTELLSP LG Q   +  Q S+
Sbjct: 158  LILMFDVSLFLRHNFARVWASASEKLTSLEIGYISSVTVTELLSPNLGSQLPSNPAQPSI 217

Query: 1984 LPNIQKLWLAVDYITDTMIGTISKSLVSLIHLDLRDAPIIEPSVTFDLTNSGLQLINPHG 1805
            LP+IQKL L VDYITD M+GTISK L+ L HLDL+DAP+IEP +TFDLTN+GLQ IN  G
Sbjct: 218  LPSIQKLCLNVDYITDAMVGTISKGLMLLTHLDLQDAPLIEPRITFDLTNAGLQQINQLG 277

Query: 1804 KLKHLSLIRSQEFVVTSFKRVNDLGVLLMADRCASMESICLGGFCRVTDTGFKTILHSCS 1625
            +LKHLSL+RSQEF +T F+RVNDLG+LLMAD+CA+MESICLGGFCRVTDTGFKTILHSC+
Sbjct: 278  RLKHLSLVRSQEFQITYFRRVNDLGLLLMADKCANMESICLGGFCRVTDTGFKTILHSCT 337

Query: 1624 SLYKFKVSHGSQLTDLVFHDINATSLALTHVSLRWCNLLTNLAFIRLASNRNLSVLDLRD 1445
             LYK KV+HG+ LTDLVFHDI+ATSL LTHVSLR CNLLTN A + LASN+ L +LDLRD
Sbjct: 338  RLYKLKVTHGTHLTDLVFHDISATSLTLTHVSLRRCNLLTNHAVLSLASNKVLKILDLRD 397

Query: 1444 CRNLGDSALKAIGTLCKLKTLLLDGSDISFSGLSYLKENVMNSIVSLSLRGCKRLTDKCI 1265
            CR+LGD AL+AIGTL +LK LLLDGSDI+ +GL YL+ +V++S+ +LSLRGCKRLTDKCI
Sbjct: 398  CRSLGDEALQAIGTLPRLKILLLDGSDITDAGLLYLRPSVISSLYALSLRGCKRLTDKCI 457

Query: 1264 SLLFDGFASKELKELDLSNLPNLSDATVLLLAKSRIQIVELRMRQCPLIGDTSVMALASM 1085
            + LF+G    EL+ELDLSNLPNLSD  VLLLAKSRI   ELRMRQCPLIGDTSVMALASM
Sbjct: 458  TALFNGCCVLELRELDLSNLPNLSDNGVLLLAKSRIPFFELRMRQCPLIGDTSVMALASM 517

Query: 1084 QADDDCWRGSSLQLLDLFNCGAITPLSFRWLKKPYFPRLRWLGVTGIVNRDLVDALTRSR 905
               D+   GSSL+LLDLFNCG ITPL+FRWLKKPYFPRL+WLGVTG VNRD+VDAL RSR
Sbjct: 518  LV-DEAKHGSSLRLLDLFNCGGITPLAFRWLKKPYFPRLKWLGVTGSVNRDMVDALARSR 576

Query: 904  PFLHVSFRGEELGTNQWDNSDDVYMHDYEEVDELEQWLLDDDNESADENMEDA 746
            PFLHV+  GEELG + +  SD +Y HDY++VDE EQWLL+ D +S  E M DA
Sbjct: 577  PFLHVACHGEELGADPYGTSDGLYTHDYDDVDEFEQWLLEADIDSDYEEMGDA 629


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