BLASTX nr result

ID: Bupleurum21_contig00006242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006242
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554698.1| PREDICTED: uncharacterized protein LOC100800...   160   3e-37
ref|XP_004142521.1| PREDICTED: uncharacterized protein LOC101210...   159   7e-37
gb|ABK96363.1| unknown [Populus trichocarpa x Populus deltoides]      155   1e-35
ref|XP_002512246.1| conserved hypothetical protein [Ricinus comm...   145   2e-32
ref|NP_564660.1| uncharacterized protein [Arabidopsis thaliana] ...   134   4e-29

>ref|XP_003554698.1| PREDICTED: uncharacterized protein LOC100800250 [Glycine max]
          Length = 378

 Score =  160 bits (406), Expect = 3e-37
 Identities = 113/260 (43%), Positives = 140/260 (53%), Gaps = 8/260 (3%)
 Frame = -2

Query: 758 MGTHFLIQSNP---KWNPL----LQTFPIRYTPIKPPNHLNSFIPKFNQTLTKFHIKSSY 600
           M    L+Q+NP   KWN L     +T P R+TPI          P   + ++     SS 
Sbjct: 3   MSITLLLQANPSHLKWNQLPSLPRRTRPDRFTPI----------PDSKRRVSSVKCISS- 51

Query: 599 STNNPTRADTNSPNKQNPLQILAQSIIQTIKSLQKPAITAVLLGLLLFSDPNSALAASGG 420
                +R   N+ + Q+P ++LA ++  T+K+L+KPAI AVL+GLLL  DP  A AASGG
Sbjct: 52  -----SRKPDNTFSLQSPWEVLASTVSNTLKALKKPAIAAVLVGLLLMYDPTCAFAASGG 106

Query: 419 RMGGKXXXXXXXXXXXXXXXXXXXSG-RXXXXXXXXXXXXXXXXXXXXXXXXGIGSSXXX 243
           RMGG+                   SG                          G GSS   
Sbjct: 107 RMGGRSFSSSSSSSRSYSVPRTSSSGFSFSAPYYGPSPFGGVYVGPAVGVGVGAGSSFFL 166

Query: 242 XXXXXXXXXXVSGFLSDKSDDSLLTATEKTSVLKLQVGLLGMARTLQQDLNRIAERADTS 63
                     VSGFLSD+S+ S+LTA +KT+VLKLQVGLLGM RTLQ+DLNRIAE ADTS
Sbjct: 167 ILVGFLAFVLVSGFLSDRSEGSVLTAADKTTVLKLQVGLLGMGRTLQRDLNRIAEVADTS 226

Query: 62  TPQGLSYVLTETTLALLRHP 3
           T +GL YVLTETTLALLRHP
Sbjct: 227 TSEGLHYVLTETTLALLRHP 246


>ref|XP_004142521.1| PREDICTED: uncharacterized protein LOC101210275 [Cucumis sativus]
          Length = 406

 Score =  159 bits (403), Expect = 7e-37
 Identities = 101/206 (49%), Positives = 120/206 (58%), Gaps = 4/206 (1%)
 Frame = -2

Query: 608 SSYSTNNPTRAD-TNSPNKQNPLQILAQSIIQTIKSLQKPAITAVLLGLLLFSDPNSALA 432
           S+ S +N +  +  N    ++P++++  SII  +K+LQKPAI AVLLGLLL  DPNSALA
Sbjct: 69  STTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLMYDPNSALA 128

Query: 431 ASGGRMGGKXXXXXXXXXXXXXXXXXXXSG---RXXXXXXXXXXXXXXXXXXXXXXXXGI 261
           ASGGR+GG                    SG                            G 
Sbjct: 129 ASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGPAVGVGLGA 188

Query: 260 GSSXXXXXXXXXXXXXVSGFLSDKSDDSLLTATEKTSVLKLQVGLLGMARTLQQDLNRIA 81
           GSS             VSGFLSD+SD S+LTA++KTSVLKLQVGLLGM R LQ+DLNRIA
Sbjct: 189 GSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQVGLLGMGRGLQRDLNRIA 248

Query: 80  ERADTSTPQGLSYVLTETTLALLRHP 3
           E ADTSTP+GL YVLTET LALLRHP
Sbjct: 249 ESADTSTPEGLCYVLTETILALLRHP 274


>gb|ABK96363.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 407

 Score =  155 bits (392), Expect = 1e-35
 Identities = 108/278 (38%), Positives = 147/278 (52%), Gaps = 26/278 (9%)
 Frame = -2

Query: 758 MGTHFLIQSNP-KWNPLLQTFPIR-YTPIKPPNHLNSFIP----KF-NQTLTKFHIKSSY 600
           M T  LI+S+P KW    + FP +   P+  PNH    IP    KF ++ +++  I +  
Sbjct: 1   MATASLIESSPLKWK---KAFPFQPQPPLLTPNHYPYLIPLKPPKFTSKCISQLPILNPN 57

Query: 599 STNNP-------------TRADTNSPNKQNPLQILAQSIIQTIKSLQKPAITAVLLGLLL 459
           S NN              ++  +  P  +NPL+I+ +++++ +  L+KPAI A+L+G+LL
Sbjct: 58  SKNNNGPFPISPSITKPISQNLSKPPTSKNPLEIIYETMLKALDILKKPAIAAILIGVLL 117

Query: 458 FSDPNSALAASGGRMGGKXXXXXXXXXXXXXXXXXXXSGRXXXXXXXXXXXXXXXXXXXX 279
             DPNSA AASGGR+GG                     G                     
Sbjct: 118 LHDPNSAFAASGGRIGGNSFSRRSSSEYSSRSYSVPRGGSSGFSYSVPYYAPSPFGGGGV 177

Query: 278 XXXXGIG------SSXXXXXXXXXXXXXVSGFLSDKSDDSLLTATEKTSVLKLQVGLLGM 117
                +G      SS             VSGFLSD+++  +LTA EKTSVLKLQVGLLGM
Sbjct: 178 YVGPAVGVGVGAGSSLFFILAGFAAFMLVSGFLSDRNEGGVLTAAEKTSVLKLQVGLLGM 237

Query: 116 ARTLQQDLNRIAERADTSTPQGLSYVLTETTLALLRHP 3
            R+LQ+DLNRIAE ADTS+ +GL+YVLTET+LALLRHP
Sbjct: 238 GRSLQRDLNRIAEVADTSSSEGLNYVLTETSLALLRHP 275


>ref|XP_002512246.1| conserved hypothetical protein [Ricinus communis]
           gi|223548207|gb|EEF49698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 360

 Score =  145 bits (365), Expect = 2e-32
 Identities = 107/253 (42%), Positives = 128/253 (50%), Gaps = 6/253 (2%)
 Frame = -2

Query: 743 LIQSNP-KWNPLLQTFPIRYTPIKPPNHLNSFIPKFNQTLTKFHIKSSYSTNNPTRADTN 567
           L+QS P KW    QTFP  +  + PP  L      FN       +KS   TN        
Sbjct: 6   LLQSTPLKWK---QTFP--FLDLSPPRSL-----PFNP------LKSGLGTN-------- 41

Query: 566 SPNKQNPLQILAQSIIQTIKSLQKPAITAVLLGLLLFSDPNSALAASGGRMGGKXXXXXX 387
                 P  I+  + I+T+  L+KPAI A+L+G LL  DPNSA AASGGRMGG+      
Sbjct: 42  ------PFDIIYNTFIRTLNFLKKPAIAAILVGALLMYDPNSAFAASGGRMGGRSFSRSS 95

Query: 386 XXXXXXXXXXXXXSG-----RXXXXXXXXXXXXXXXXXXXXXXXXGIGSSXXXXXXXXXX 222
                        S                               G GSS          
Sbjct: 96  SSSSSRSYSVPRSSSPGFSYSVPYYAPSPFGGGGLYVGPAVGVGVGAGSSLFFILAGFAA 155

Query: 221 XXXVSGFLSDKSDDSLLTATEKTSVLKLQVGLLGMARTLQQDLNRIAERADTSTPQGLSY 42
              VSGFLSD+S+  +LTAT+KTSVLKLQVGLLGM R LQ+DLNRIAE ADTS+ +GL+Y
Sbjct: 156 FMLVSGFLSDRSEGGVLTATDKTSVLKLQVGLLGMGRALQRDLNRIAEVADTSSSEGLTY 215

Query: 41  VLTETTLALLRHP 3
           VLTET+LALLRHP
Sbjct: 216 VLTETSLALLRHP 228


>ref|NP_564660.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20260342|gb|AAM13069.1| unknown protein [Arabidopsis
           thaliana] gi|21537407|gb|AAM61748.1| unknown
           [Arabidopsis thaliana] gi|332194993|gb|AEE33114.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 391

 Score =  134 bits (336), Expect = 4e-29
 Identities = 99/255 (38%), Positives = 127/255 (49%), Gaps = 14/255 (5%)
 Frame = -2

Query: 725 KWNPLLQTFPIRYTPIKPPNHLNSFI---PKFNQTLTKFHIKSSYSTNNPTRADTNSPNK 555
           +WN      P+ YT  + P+H    +   P+      +  I   Y  +  + +D +  + 
Sbjct: 14  QWNQ-----PLPYT--QRPHHRTVLLYSKPQRRSNSIRLQISVKYKQSTSS-SDPDLRSN 65

Query: 554 QNPLQILAQSIIQTIKSLQKPAITAVLLGLLLFSDPNSALAASGGRMGGKXXXXXXXXXX 375
            NP + +A  + + + SL+KPAI AVLLGLLLF DPNSAL A+ G   G           
Sbjct: 66  FNPFEQIAIQVKKALDSLKKPAIAAVLLGLLLFYDPNSAL-AASGGRIGGNSFSSRSRSS 124

Query: 374 XXXXXXXXXSGRXXXXXXXXXXXXXXXXXXXXXXXXGIG----------SSXXXXXXXXX 225
                      R                         +G          SS         
Sbjct: 125 SSSSSQSYSVPRTSNPSFSYSARTAPYYGPSPFGGGFVGPAVGFGFGGFSSFSLILVGFA 184

Query: 224 XXXXVSGFLSDKS-DDSLLTATEKTSVLKLQVGLLGMARTLQQDLNRIAERADTSTPQGL 48
               VSGFLSD+S DDS+LT T+KTSV+KLQVGLLG+ RTLQQD NR+AE +DTSTP+GL
Sbjct: 185 AFVLVSGFLSDRSQDDSILTDTQKTSVIKLQVGLLGLGRTLQQDFNRLAESSDTSTPEGL 244

Query: 47  SYVLTETTLALLRHP 3
           SYVLTE TLALLRHP
Sbjct: 245 SYVLTEATLALLRHP 259


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