BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006216
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-393...    55   7e-06
ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana] gi|...    55   7e-06
gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]               55   7e-06

>gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
          Length = 482

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
 Frame = -3

Query: 583 EKAKRDWVVSELEKIVRRWVRN----HTKAKHP--HTVATVLPFGSHGLDVHTSDSDINV 422
           ++ KR  V+++L KIV RWV+N    H   ++    T AT+LP+GS+GL V+ S+SDI+ 
Sbjct: 12  DEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGLGVYGSESDIDA 71

Query: 421 LCVG 410
           LC+G
Sbjct: 72  LCIG 75


>ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
           gi|62320636|dbj|BAD95301.1| poly(A) polymerase
           [Arabidopsis thaliana] gi|332640894|gb|AEE74415.1|
           poly(A) polymerase 3 [Arabidopsis thaliana]
          Length = 507

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
 Frame = -3

Query: 583 EKAKRDWVVSELEKIVRRWVRN----HTKAKHP--HTVATVLPFGSHGLDVHTSDSDINV 422
           ++ KR  V+++L KIV RWV+N    H   ++    T AT+LP+GS+GL V+ S+SDI+ 
Sbjct: 36  DEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGLGVYGSESDIDA 95

Query: 421 LCVG 410
           LC+G
Sbjct: 96  LCIG 99


>gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
          Length = 483

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
 Frame = -3

Query: 583 EKAKRDWVVSELEKIVRRWVRN----HTKAKHP--HTVATVLPFGSHGLDVHTSDSDINV 422
           ++ KR  V+++L KIV RWV+N    H   ++    T AT+LP+GS+GL V+ S+SDI+ 
Sbjct: 12  DEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYGSYGLGVYGSESDIDA 71

Query: 421 LCVG 410
           LC+G
Sbjct: 72  LCIG 75