BLASTX nr result

ID: Bupleurum21_contig00006196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006196
         (1544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637168.1| Polynucleotidyl transferase [Medicago trunca...   203   1e-49
ref|XP_002337133.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-42
ref|XP_003629173.1| Polynucleotidyl transferase [Medicago trunca...   156   1e-35
ref|XP_003548860.1| PREDICTED: uncharacterized protein LOC100777...   153   1e-34
ref|XP_003541171.1| PREDICTED: uncharacterized protein LOC100785...   147   1e-32

>ref|XP_003637168.1| Polynucleotidyl transferase [Medicago truncatula]
           gi|355503103|gb|AES84306.1| Polynucleotidyl transferase
           [Medicago truncatula]
          Length = 239

 Score =  203 bits (516), Expect = 1e-49
 Identities = 102/205 (49%), Positives = 139/205 (67%), Gaps = 3/205 (1%)
 Frame = +3

Query: 117 WAELFKVHCRSHKVLHHIIPSKTKDGKEREKATLTDD---EQEMWDTLDAAVVQWIYSTI 287
           +AELF++  RSH+VLHHI+PSK       +  T TD    E E W TLD+ V+QWIYSTI
Sbjct: 18  FAELFRIQARSHRVLHHIVPSK-------DNTTPTDTSSAEFEQWTTLDSTVLQWIYSTI 70

Query: 288 STDLLNTVIEADVSAMTLWNRLRDLFQDNENSRAVALEHEFNNTYLRDFSSISTYCQHLK 467
           STDLL T++E D + M  WNR  D+FQDN+N+RAV LE EF+NT + DF ++S YCQ LK
Sbjct: 71  STDLLTTILEPDSTTMEAWNRSSDIFQDNQNARAVTLEQEFSNTRMEDFPNVSNYCQRLK 130

Query: 468 TLSDQLKNVGAPVSNNRLVLRMVGGLTPAYKGVASVIRHKKVLPPFYEVRSMLALEETSM 647
            LSDQL+NVG+PV+N+ LVL+++ G   AY+ VA++I     LP FY+ RSML LEE  M
Sbjct: 131 MLSDQLRNVGSPVNNHHLVLQLIYGPPKAYRSVATLICQNNPLPKFYQARSMLTLEEACM 190

Query: 648 KEAAAEGDDAMIVAARDEISDTRPQ 722
            + +  G  A +  ++ + ++   Q
Sbjct: 191 AKMSNTGSHAAMHTSQSKPTEDTSQ 215


>ref|XP_002337133.1| predicted protein [Populus trichocarpa] gi|222838337|gb|EEE76702.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  179 bits (453), Expect = 2e-42
 Identities = 84/155 (54%), Positives = 111/155 (71%)
 Frame = +3

Query: 201 REKATLTDDEQEMWDTLDAAVVQWIYSTISTDLLNTVIEADVSAMTLWNRLRDLFQDNEN 380
           ++  +L D + ++W  +DA V+QWIY TIS DLLN ++E D +A   WNRLRD+F DN+N
Sbjct: 2   KQDTSLQDTDPDLWSRVDAIVLQWIYGTISEDLLNIILERDSTAALAWNRLRDIFSDNKN 61

Query: 381 SRAVALEHEFNNTYLRDFSSISTYCQHLKTLSDQLKNVGAPVSNNRLVLRMVGGLTPAYK 560
           SRA+ LE EF+   +  F+  S+YCQHLK+LSDQL NVG+PV+N RLVL++  GLT AY 
Sbjct: 62  SRALYLEQEFSKVQMEHFADASSYCQHLKSLSDQLSNVGSPVTNERLVLQLASGLTDAYA 121

Query: 561 GVASVIRHKKVLPPFYEVRSMLALEETSMKEAAAE 665
            V S I H   LPPFY+ RSML LEET+  + AA+
Sbjct: 122 SVGSQIHHGDSLPPFYKSRSMLVLEETTRTKKAAQ 156


>ref|XP_003629173.1| Polynucleotidyl transferase [Medicago truncatula]
           gi|355523195|gb|AET03649.1| Polynucleotidyl transferase
           [Medicago truncatula]
          Length = 169

 Score =  156 bits (395), Expect = 1e-35
 Identities = 79/155 (50%), Positives = 99/155 (63%)
 Frame = +3

Query: 18  TCSSSSFHPALAVSNIKTHVPITLEMENVQYANWAELFKVHCRSHKVLHHIIPSKTKDGK 197
           T S + FHPA AVSNIK H+ I LEME  QY  WAELF++  RSH+VLHH +PSK     
Sbjct: 34  TYSKTKFHPAFAVSNIKNHIHIVLEMEKDQYGTWAELFRILARSHRVLHHGVPSKD---- 89

Query: 198 EREKATLTDDEQEMWDTLDAAVVQWIYSTISTDLLNTVIEADVSAMTLWNRLRDLFQDNE 377
                          +T       WIYSTISTDLL T++E + +A+  WNRL D+FQDN+
Sbjct: 90  ---------------NTTPRDTSSWIYSTISTDLLTTILEPNSTAVETWNRLTDIFQDNQ 134

Query: 378 NSRAVALEHEFNNTYLRDFSSISTYCQHLKTLSDQ 482
           N+RAV LE EF+NT + DF ++S YCQ LK  SD+
Sbjct: 135 NARAVTLEQEFSNTRMDDFPNVSAYCQLLKMHSDK 169


>ref|XP_003548860.1| PREDICTED: uncharacterized protein LOC100777165 [Glycine max]
          Length = 205

 Score =  153 bits (387), Expect = 1e-34
 Identities = 74/126 (58%), Positives = 93/126 (73%)
 Frame = +3

Query: 333 MTLWNRLRDLFQDNENSRAVALEHEFNNTYLRDFSSISTYCQHLKTLSDQLKNVGAPVSN 512
           M  WNRLRD+FQDN++SRAV LE++F +T +  FSS+S YCQHLK+LSDQLKNVG PV N
Sbjct: 1   MEAWNRLRDIFQDNKHSRAVTLEYDFTHTTMEAFSSVSAYCQHLKSLSDQLKNVGFPVDN 60

Query: 513 NRLVLRMVGGLTPAYKGVASVIRHKKVLPPFYEVRSMLALEETSMKEAAAEGDDAMIVAA 692
           +RLVL++V  LT  YKGVA++IR    LP FY+ RSML LEE+ +K+AA     AM+   
Sbjct: 61  SRLVLQLVSSLTEPYKGVATLIRQSDPLPQFYQARSMLVLEESGLKKAAQTSSSAMVARD 120

Query: 693 RDEISD 710
            DE  D
Sbjct: 121 SDESQD 126


>ref|XP_003541171.1| PREDICTED: uncharacterized protein LOC100785648 [Glycine max]
          Length = 124

 Score =  147 bits (370), Expect = 1e-32
 Identities = 70/123 (56%), Positives = 90/123 (73%)
 Frame = +3

Query: 333 MTLWNRLRDLFQDNENSRAVALEHEFNNTYLRDFSSISTYCQHLKTLSDQLKNVGAPVSN 512
           M  WNRLRD+FQDN++SRA+ LE++F +T +  FSS+S YCQHLK+LSDQLKNV  PV N
Sbjct: 1   MEAWNRLRDIFQDNKHSRAITLEYDFTHTTMEAFSSVSAYCQHLKSLSDQLKNVEFPVDN 60

Query: 513 NRLVLRMVGGLTPAYKGVASVIRHKKVLPPFYEVRSMLALEETSMKEAAAEGDDAMIVAA 692
           +RLVL++V  LT  YKGVA++IR    LP FY+ RSML LEE+ +K+ A     AM+   
Sbjct: 61  SRLVLQLVSSLTEPYKGVATLIRQSDPLPQFYQARSMLVLEESDLKKVAQTSSSAMVARD 120

Query: 693 RDE 701
            DE
Sbjct: 121 SDE 123


Top