BLASTX nr result

ID: Bupleurum21_contig00006191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006191
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633196.1| PREDICTED: general transcription factor IIE ...   565   e-159
ref|XP_004138223.1| PREDICTED: general transcription factor IIE ...   558   e-157
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|2...   548   e-154
ref|XP_003524511.1| PREDICTED: uncharacterized protein LOC100810...   520   e-145
gb|ABR16597.1| unknown [Picea sitchensis]                             508   e-141

>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
            vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
            product [Vitis vinifera]
          Length = 475

 Score =  565 bits (1455), Expect = e-159
 Identities = 280/355 (78%), Positives = 313/355 (88%), Gaps = 2/355 (0%)
 Frame = -1

Query: 1062 YDDITTKGDNQPKSGRTDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTKQLRRTLRFFE 883
            YDDITTKGDNQPK+GR+DNRGIAVVVLDALTRRQWVREEDLAKDLKLH+KQLRRTLRFFE
Sbjct: 18   YDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKDLKLHSKQLRRTLRFFE 77

Query: 882  EEKLVTRDHRKETAKGAKIYSAAVAATADGHHTGREGEEKIKLHTHSYCCLDYAQIYDVV 703
            EEKLVTRDHR+ETAKGAKIYSAA+AAT DG  T +EG+EKIKLHTHSYCCLDYAQIYDVV
Sbjct: 78   EEKLVTRDHRRETAKGAKIYSAAIAATGDGQQT-KEGDEKIKLHTHSYCCLDYAQIYDVV 136

Query: 702  RYRMHRMKKKIKDELDDRNTIQEYVCPNCKRRYTALDALRLISPEDEYFHCENCNGELVA 523
            RYR+HRMKKK+KDEL+D+NT+QEY+CPNC +RY ALDALRLIS EDEYFHCE+CNGELVA
Sbjct: 137  RYRLHRMKKKLKDELEDKNTVQEYICPNCGKRYNALDALRLISMEDEYFHCESCNGELVA 196

Query: 522  ESDKLAAEEMGDGDDNAXXXXREKLRDMLQKFEEKLKPLMDQLNRVKDLTVPEFGTLQAW 343
            ESDKLA++E+GDGDDNA    REKL+DMLQK E +LKPLMDQL+RVKDL VPEFG+LQAW
Sbjct: 197  ESDKLASQEIGDGDDNARRRRREKLKDMLQKMEVQLKPLMDQLSRVKDLPVPEFGSLQAW 256

Query: 342  EVRANAAARLANGDSNSNDPSRSSQ--GYTGTPMPFLGETKVEVAFSGVEEKGTNIKSEN 169
            E RANAA R ANGDSN+ND S+SSQ  G+ GTPMPF+GETKVEVAFSGV  K  + KSE 
Sbjct: 257  EARANAAGRAANGDSNANDSSKSSQGLGFGGTPMPFVGETKVEVAFSGVGVKEEDSKSEI 316

Query: 168  TSTPMKVLPPWMIKQGMVLTNEQRGEVKQESNMEGTSDAGGLSDDKKSIDQKDEK 4
             +  +KVLPPWMIK+GM LT EQRGE+KQES M  +S   G SDDKKS   KDE+
Sbjct: 317  ANASLKVLPPWMIKEGMNLTKEQRGEIKQESKMGSSSAPLGSSDDKKSTTNKDEE 371


>ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
            sativus]
          Length = 475

 Score =  558 bits (1438), Expect = e-157
 Identities = 272/353 (77%), Positives = 306/353 (86%)
 Frame = -1

Query: 1062 YDDITTKGDNQPKSGRTDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTKQLRRTLRFFE 883
            YDDITTKGDNQPK+GR+DNRGIAVVVLDALTRRQWVREEDLAK+LKLH+KQLRRTLRF E
Sbjct: 18   YDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKNLKLHSKQLRRTLRFLE 77

Query: 882  EEKLVTRDHRKETAKGAKIYSAAVAATADGHHTGREGEEKIKLHTHSYCCLDYAQIYDVV 703
            EEKL+TRDHR+ETAKGAKI+SAAVAATADG H  +EG+EKIK+HTHSYC LDYAQ+YDVV
Sbjct: 78   EEKLITRDHRRETAKGAKIFSAAVAATADGPHHSKEGDEKIKMHTHSYCSLDYAQVYDVV 137

Query: 702  RYRMHRMKKKIKDELDDRNTIQEYVCPNCKRRYTALDALRLISPEDEYFHCENCNGELVA 523
            RYRMHRMKKK+KDEL+D+NT+QEY+CPNC RRYTALDALRLIS EDEYFHCENCNGELVA
Sbjct: 138  RYRMHRMKKKLKDELEDKNTVQEYICPNCSRRYTALDALRLISFEDEYFHCENCNGELVA 197

Query: 522  ESDKLAAEEMGDGDDNAXXXXREKLRDMLQKFEEKLKPLMDQLNRVKDLTVPEFGTLQAW 343
            ESDKLAA +  DGDDN      EKL+DMLQK E +LKPL++QL+RVKDL VPEFGTL AW
Sbjct: 198  ESDKLAAVQGVDGDDNVRKRRHEKLKDMLQKMEAQLKPLVEQLSRVKDLPVPEFGTLLAW 257

Query: 342  EVRANAAARLANGDSNSNDPSRSSQGYTGTPMPFLGETKVEVAFSGVEEKGTNIKSENTS 163
            E RA+AAAR  NGD N NDPS+SSQGY GTPMPF+GETKVEVAFSG E  G + KSE+ +
Sbjct: 258  EARASAAARGINGDLNGNDPSKSSQGYGGTPMPFVGETKVEVAFSGAEGTGVDAKSESEN 317

Query: 162  TPMKVLPPWMIKQGMVLTNEQRGEVKQESNMEGTSDAGGLSDDKKSIDQKDEK 4
            T +KVLPPWMIK+GM LT EQRGEVK ES  +  S +   SDDKKS+   D+K
Sbjct: 318  TSLKVLPPWMIKKGMNLTKEQRGEVKDESKTDAGSASAQFSDDKKSLANDDDK 370


>ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|222874815|gb|EEF11946.1|
            predicted protein [Populus trichocarpa]
          Length = 472

 Score =  548 bits (1412), Expect = e-154
 Identities = 272/353 (77%), Positives = 308/353 (87%)
 Frame = -1

Query: 1062 YDDITTKGDNQPKSGRTDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTKQLRRTLRFFE 883
            YDDITTKGDNQPK+GR+DNRGIAVVVLDALTRRQWVREEDLAK+LKLH+KQLRRTLRFFE
Sbjct: 18   YDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKELKLHSKQLRRTLRFFE 77

Query: 882  EEKLVTRDHRKETAKGAKIYSAAVAATADGHHTGREGEEKIKLHTHSYCCLDYAQIYDVV 703
            EEKLVTRDHRKETAK AK+++AAVA T DGH T +EG++KIK+HTHSYCCLDYAQIYDVV
Sbjct: 78   EEKLVTRDHRKETAKAAKMHNAAVANTTDGHRT-KEGDDKIKMHTHSYCCLDYAQIYDVV 136

Query: 702  RYRMHRMKKKIKDELDDRNTIQEYVCPNCKRRYTALDALRLISPEDEYFHCENCNGELVA 523
            RYR+HRM+KK+KDEL+D+NT+QEY CPNC RRY ALDALRL+S  DEYFHCENC+GELVA
Sbjct: 137  RYRLHRMRKKLKDELEDKNTVQEYTCPNCGRRYNALDALRLMSLVDEYFHCENCDGELVA 196

Query: 522  ESDKLAAEEMGDGDDNAXXXXREKLRDMLQKFEEKLKPLMDQLNRVKDLTVPEFGTLQAW 343
            ESDKLAA+E GDGDDNA    REKL+DMLQK E +LKPLM QL+RVKDL VPEFG+LQ W
Sbjct: 197  ESDKLAAQEGGDGDDNARRRRREKLKDMLQKMEVQLKPLMAQLSRVKDLPVPEFGSLQEW 256

Query: 342  EVRANAAARLANGDSNSNDPSRSSQGYTGTPMPFLGETKVEVAFSGVEEKGTNIKSENTS 163
            ++ A+AA R ANGDS+ NDPSRSSQGY GTPMPFLGETKVEV+FSGVE K  ++KSE  S
Sbjct: 257  QIHASAAGRAANGDSSYNDPSRSSQGYGGTPMPFLGETKVEVSFSGVEGK-EDLKSETAS 315

Query: 162  TPMKVLPPWMIKQGMVLTNEQRGEVKQESNMEGTSDAGGLSDDKKSIDQKDEK 4
            T +KVLPPWMIKQGM LT EQRGEVKQ S M+ +S A    DDKK   + D+K
Sbjct: 316  TGLKVLPPWMIKQGMNLTKEQRGEVKQGSKMDDSSAAAEPPDDKKISIENDDK 368


>ref|XP_003524511.1| PREDICTED: uncharacterized protein LOC100810405 [Glycine max]
          Length = 471

 Score =  520 bits (1339), Expect = e-145
 Identities = 257/348 (73%), Positives = 294/348 (84%), Gaps = 2/348 (0%)
 Frame = -1

Query: 1062 YDDITTKGDNQPKSGRTDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTKQLRRTLRFFE 883
            YDD+T+KGDNQPK+GR+DNRGIAVVVLDALTRRQWVREEDLAKDLKLHTKQLRRTLRFFE
Sbjct: 17   YDDLTSKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTKQLRRTLRFFE 76

Query: 882  EEKLVTRDHRKETAKGAKIYSAAVAATADGHHTGREGEEKIKLHTHSYCCLDYAQIYDVV 703
            EEK++TRDHR+ETAKGAKIYSAAVAATADG  T +EGEEK+KLHTHSYCCLDYAQIYDV+
Sbjct: 77   EEKIITRDHRRETAKGAKIYSAAVAATADGQQTAKEGEEKVKLHTHSYCCLDYAQIYDVI 136

Query: 702  RYRMHRMKKKIKDELDDRNTIQEYVCPNCKRRYTALDALRLISPEDEYFHCENCNGELVA 523
            RYR+HRMK K+KDEL+++NT+QEY+CPNC +RY ALDALRL+S EDE FHCE+CNG L  
Sbjct: 137  RYRLHRMKHKLKDELENKNTLQEYICPNCGKRYNALDALRLVSFEDEDFHCESCNGRLEV 196

Query: 522  ESDKLAAEEMGDGDDNAXXXXREKLRDMLQKFEEKLKPLMDQLNRVKDLTVPEFGTLQAW 343
            ESDK+AA+E GDGDDNA    REKL+DMLQK E +LKPLMDQL+RVKDL VPEFG+LQAW
Sbjct: 197  ESDKIAAQERGDGDDNARRRRREKLKDMLQKMEVQLKPLMDQLSRVKDLPVPEFGSLQAW 256

Query: 342  EVRANAAARLANGDSNSNDPSRSSQGYTGTPMPFLGETKVEVAFSGVEEKGTNIKSENTS 163
            E RA+AA R ANGD N+ D   S  GY G  +P+ G+TKV V F+  E KG  +KSE  S
Sbjct: 257  EARASAAVRAANGDINAGDSKISQPGYNG--VPYSGDTKVVVDFN-TEGKGEGVKSETDS 313

Query: 162  TPMKVLPPWMIKQGMVLTNEQRGEVKQESNMEG--TSDAGGLSDDKKS 25
            T +KVLPPWMI  GM LT EQRGEVKQE+ M+G  TS A   +DDKKS
Sbjct: 314  TSLKVLPPWMITSGMNLTKEQRGEVKQETKMDGTSTSTAAQYTDDKKS 361


>gb|ABR16597.1| unknown [Picea sitchensis]
          Length = 480

 Score =  508 bits (1307), Expect = e-141
 Identities = 250/355 (70%), Positives = 298/355 (83%), Gaps = 2/355 (0%)
 Frame = -1

Query: 1062 YDDITTKGDNQPKSGRTDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTKQLRRTLRFFE 883
            YDD TT+ +NQPKSGR+DNRG+AVVVLDALTRRQWV+E+DLAKDLKLH+KQLRRTLRFFE
Sbjct: 18   YDDTTTRAENQPKSGRSDNRGMAVVVLDALTRRQWVKEDDLAKDLKLHSKQLRRTLRFFE 77

Query: 882  EEKLVTRDHRKETAKGAKIYSAAVAATADGHHTGREGEEKIKLHTHSYCCLDYAQIYDVV 703
            EE+L+TRDHR+ETAKGAK+++AA+AATADG   G+EGEEK+KLHTHSYCCLDYAQ YDVV
Sbjct: 78   EERLITRDHRRETAKGAKVFNAAIAATADGQQNGKEGEEKLKLHTHSYCCLDYAQTYDVV 137

Query: 702  RYRMHRMKKKIKDELDDRNTIQEYVCPNCKRRYTALDALRLISPEDEYFHCENCNGELVA 523
            RYR+HRMKK++KDEL+DRNT+QEY+CPNC RRY+ALDAL+LIS  ++ FHCENCN ELVA
Sbjct: 138  RYRIHRMKKRLKDELEDRNTLQEYICPNCNRRYSALDALQLISFTEDSFHCENCNSELVA 197

Query: 522  ESDKLAAEEMGDGDDNAXXXXREKLRDMLQKFEEKLKPLMDQLNRVKDLTVPEFGTLQAW 343
            ESDKLAAEE GDG+DN     REKL+++L+K E +LKPLM+QL RVKDL VPEFG+L  W
Sbjct: 198  ESDKLAAEEKGDGEDNGRRRRREKLKELLEKMEVQLKPLMEQLTRVKDLPVPEFGSLLQW 257

Query: 342  EVRANAAARLANGDSNSNDPSRSS--QGYTGTPMPFLGETKVEVAFSGVEEKGTNIKSEN 169
            E RA AA R  +GD+N+N+ S+SS  QG+ GTPMPFLGETKVEVA SG+E K  + K + 
Sbjct: 258  EARAIAAGRAVSGDTNANESSKSSQGQGFGGTPMPFLGETKVEVALSGMEVKAEDSKEDV 317

Query: 168  TSTPMKVLPPWMIKQGMVLTNEQRGEVKQESNMEGTSDAGGLSDDKKSIDQKDEK 4
             S  +KVLPPWMI+QGM LTNEQRGEVKQE   +  S   G + +KK  D  DEK
Sbjct: 318  AS--LKVLPPWMIRQGMNLTNEQRGEVKQELKPDNISSFMGPAVEKKPTD--DEK 368


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