BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006186
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...   135   3e-39
ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabac...   100   1e-29
emb|CBI23503.3| unnamed protein product [Vitis vinifera]              120   2e-29
ref|XP_002534065.1| conserved hypothetical protein [Ricinus comm...    66   4e-23
ref|YP_173425.1| hypothetical protein NitaMp084 [Nicotiana tabac...   103   3e-20

>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score =  135 bits (340), Expect(3) = 3e-39
 Identities = 68/85 (80%), Positives = 73/85 (85%), Gaps = 3/85 (3%)
 Frame = -2

Query: 726 MFKPTPPP--SQAGKNVRQVQIRECFPQPLKERLELWDVGRRGKEKAFGDR-DFLFFSSK 556
           MFKPTPPP  ++AGKN RQVQIRECFPQPLKERL+     RRGKE AFGDR  F++ SSK
Sbjct: 326 MFKPTPPPHLNKAGKNARQVQIRECFPQPLKERLDEGREMRRGKENAFGDRYFFIYLSSK 385

Query: 555 TKKAEDGLRCVLSEGNTLFRPRWYD 481
           TKKAEDGLRCVLSEGNTLFRPRWYD
Sbjct: 386 TKKAEDGLRCVLSEGNTLFRPRWYD 410



 Score = 44.7 bits (104), Expect(3) = 3e-39
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = -1

Query: 388 LGPGKRWQQQKGRGPCSCCA 329
           LGPGKRWQQQKGRGPCS  A
Sbjct: 434 LGPGKRWQQQKGRGPCSASA 453



 Score = 28.9 bits (63), Expect(3) = 3e-39
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -3

Query: 479 VGLSPRSARWPIGIAAF 429
           +G SPRSAR P+GIAAF
Sbjct: 411 LGPSPRSARRPLGIAAF 427


>ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabacum]
           gi|56806590|dbj|BAD83491.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 162

 Score = 99.8 bits (247), Expect(3) = 1e-29
 Identities = 63/101 (62%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
 Frame = -3

Query: 539 MAYGASYLKGTRFFDRGGMIVGLSPRSARWPIGIAAFGLYLPFLIE*RIPARPGKALATT 360
           MAYGASYLKGTRFFDR GMI G SPRSA  PIGIAAFGL LPF+I+    AR     A  
Sbjct: 40  MAYGASYLKGTRFFDRRGMIAGPSPRSA-LPIGIAAFGLCLPFIIKNSGSARES---AGN 95

Query: 359 ERK--XXXXXXXXXXXXXXGQQVRHLLQKRESTSDNHASAR 243
            RK                 QQVRHLLQKRESTSDNH SAR
Sbjct: 96  NRKEGVHVAAVSAPFLVNGAQQVRHLLQKRESTSDNHVSAR 136



 Score = 53.9 bits (128), Expect(3) = 1e-29
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -1

Query: 241 QRVEWPRADLFGYIIQVESRVTGTAV 164
           QRVEWPRADLFGYIIQVESRVTG AV
Sbjct: 137 QRVEWPRADLFGYIIQVESRVTGKAV 162



 Score = 23.5 bits (49), Expect(3) = 1e-29
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -1

Query: 661 MLPPTIKGKAR 629
           ML PTIKGKAR
Sbjct: 1   MLSPTIKGKAR 11


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  120 bits (300), Expect(2) = 2e-29
 Identities = 53/54 (98%), Positives = 53/54 (98%)
 Frame = -1

Query: 403 NKEFRLGPGKRWQQQKGRGPCSCCARPPLSQWGSRFGIYYKRENPLQITTPLLG 242
           NKEFRLGPGKRWQQQKGRGPCSCCARP LSQWGSRFGIYYKRENPLQITTPLLG
Sbjct: 190 NKEFRLGPGKRWQQQKGRGPCSCCARPLLSQWGSRFGIYYKRENPLQITTPLLG 243



 Score = 35.4 bits (80), Expect(2) = 2e-29
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -2

Query: 576 FLFFSSKTKKAEDGLRCV 523
           F+ FSSKTKKAEDGLRC+
Sbjct: 165 FICFSSKTKKAEDGLRCL 182


>ref|XP_002534065.1| conserved hypothetical protein [Ricinus communis]
           gi|223525904|gb|EEF28320.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 83

 Score = 66.2 bits (160), Expect(3) = 4e-23
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -1

Query: 403 NKEFRLGPGKRWQQQKGRGPCSCCARPPLSQWGSRFGIY 287
           NK FRL P +RWQQ KG+GPCSC  RP LS+WGS+F IY
Sbjct: 45  NKNFRLDPRERWQQHKGKGPCSCYVRPLLSKWGSKFDIY 83



 Score = 63.2 bits (152), Expect(3) = 4e-23
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = -3

Query: 539 MAYGASYLKGTRFFDRGGMIVGLSPRSARWPIG 441
           M YGA YLKGTRFF+RGGMI G SPRSARWPIG
Sbjct: 1   MVYGACYLKGTRFFNRGGMIAGPSPRSARWPIG 33



 Score = 25.4 bits (54), Expect(3) = 4e-23
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = -2

Query: 441 DSSLRALPALSNR 403
           DSSL+ALPALSN+
Sbjct: 34  DSSLQALPALSNK 46


>ref|YP_173425.1| hypothetical protein NitaMp084 [Nicotiana tabacum]
           gi|56806589|dbj|BAD83490.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 105

 Score =  103 bits (258), Expect = 3e-20
 Identities = 54/83 (65%), Positives = 56/83 (67%)
 Frame = +3

Query: 354 PFCCCQRFPGPSRNSLFY*KGQVKPEGCYPNRPAGGTRREPDNHTTAVEKACSLQIRRTV 533
           PF        P R  +FY KGQ KPEG YPNR  GGTRR P NHTTAV+KACSLQIRRTV
Sbjct: 3   PFLSVVASAFPGRAGIFYYKGQAKPEGSYPNRK-GGTRRGPGNHTTAVKKACSLQIRRTV 61

Query: 534 GHPRPSSFSKKKKENLDLRKPFP 602
           GHPRPSSFS KKK        FP
Sbjct: 62  GHPRPSSFSMKKKSRSPKAFSFP 84



 Score = 65.1 bits (157), Expect(2) = 5e-15
 Identities = 34/48 (70%), Positives = 36/48 (75%)
 Frame = +2

Query: 527 HRRPSSAFFVFEEKKRKSRSPKAFSFPRRPTSHSSSLSFNGWGKHSLI 670
           H RPSS        K+KSRSPKAFSFPRR +  SSSLSFNGWGKHSLI
Sbjct: 63  HPRPSSF-----SMKKKSRSPKAFSFPRRTSLPSSSLSFNGWGKHSLI 105



 Score = 42.4 bits (98), Expect(2) = 5e-15
 Identities = 22/34 (64%), Positives = 25/34 (73%)
 Frame = +1

Query: 343 MGPFLSVVASAFPGRAGILYSIRKGR*SPKAAIP 444
           M PFLSVVASAFPGRAGI Y   KG+  P+ + P
Sbjct: 1   MDPFLSVVASAFPGRAGIFY--YKGQAKPEGSYP 32