BLASTX nr result
ID: Bupleurum21_contig00006183
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00006183
(2122 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002516670.1| ATP-dependent clp protease ATP-binding subun... 701 0.0
ref|XP_002272792.1| PREDICTED: ATP-dependent Clp protease ATP-bi... 693 0.0
ref|XP_003634146.1| PREDICTED: ATP-dependent Clp protease ATP-bi... 690 0.0
emb|CBI23009.3| unnamed protein product [Vitis vinifera] 690 0.0
ref|XP_002864237.1| hypothetical protein ARALYDRAFT_918413 [Arab... 685 0.0
>ref|XP_002516670.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis] gi|223544165|gb|EEF45689.1|
ATP-dependent clp protease ATP-binding subunit clpx,
putative [Ricinus communis]
Length = 565
Score = 701 bits (1808), Expect = 0.0
Identities = 384/572 (67%), Positives = 435/572 (76%), Gaps = 20/572 (3%)
Frame = -1
Query: 1807 MAAALRAKSCRNAYLFTVSQFRFSVLNPIHAGVRTASFQTS---SRTRFDDHF------- 1658
MAA RAK + + QFR+ + N +HAG S TS R ++DDHF
Sbjct: 1 MAAVFRAKPSKETAFY---QFRYFIFNYMHAGGAIMSTSTSYCTHRNKWDDHFSNTPYHF 57
Query: 1657 TSDKPV-----IVDRCSDDFKYWKSFNRRLNISSA----YGDPPEVWQPPGDGIVVRPGV 1505
TS KPV +++ + ++++ +L SS YGDPPEVWQPPGDGI
Sbjct: 58 TSFKPVSLRGEFIEKGNQLLDNKRNWSEKLKNSSGGGSNYGDPPEVWQPPGDGIAT---- 113
Query: 1504 KFVQVPDRDXXXXXXXXXXXSKDESWGGSGMGNAFPTPKEICKGLDRFVIGQERAKKVLA 1325
V+V + SKD WGGS +GN FPTPKEIC+GLD+FVIGQ+RAKKVL+
Sbjct: 114 --VRVSEVRGGEGRGGPGSNSKDGCWGGSDLGNNFPTPKEICRGLDKFVIGQDRAKKVLS 171
Query: 1324 VAVYNHYKRISGGTSEK-SAGNSGNDKTNALDIDVVELEKSNILMMGPTGSGKTLLAKTL 1148
VAVYNHYKRI + +K SAG+SGN+K A+D D VELEKSNIL+MGPTGSGKTLLAKTL
Sbjct: 172 VAVYNHYKRIYHDSIQKWSAGDSGNNKAEAMDEDGVELEKSNILLMGPTGSGKTLLAKTL 231
Query: 1147 ARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKK 968
AR VNVPFVIADATTLTQAGYVGEDVESILYKLL ADYNVAAAQQGIVYIDEVDKITKK
Sbjct: 232 ARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMAADYNVAAAQQGIVYIDEVDKITKK 291
Query: 967 AESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFI 788
AES+NISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKDILFICGGAFI
Sbjct: 292 AESVNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFI 351
Query: 787 DLEKTISERRQDSSIGFGAPVRANMRXXXXXXXXXXXSLLDTVESSDLIAYGLIPEFVGR 608
DLEKTISERRQDSSIGFGAPVRANMR SLL+TVES DLI+YGLIPEFVGR
Sbjct: 352 DLEKTISERRQDSSIGFGAPVRANMRMGSVTSAAVTSSLLETVESGDLISYGLIPEFVGR 411
Query: 607 FPILVNLSALTEDQLVQVLTEPKNALGKQYKKMFQMNGVNLHFTEGALRMIARKAITKNT 428
FP+LV+LSALTE+QLVQVLTEPKNALGKQYKKMFQMNGV LHFTE ALR+IA+KAITKNT
Sbjct: 412 FPVLVSLSALTENQLVQVLTEPKNALGKQYKKMFQMNGVRLHFTENALRLIAKKAITKNT 471
Query: 427 GARGLRSLLESILMDSMYEIPDERTGXXXXXXXXXXXXXXASEGRGYGAKILHGRGALTN 248
GARGLR++LE+ILMD+MYEIPD +TG +EG G G +IL+G+GAL
Sbjct: 472 GARGLRAILENILMDAMYEIPDVKTGEDIIDAVVVDEEAVGTEGCGTGGRILYGKGALDR 531
Query: 247 FLSQQKSKDMEPNAEGSDGDQEGEAELPSIVA 152
+L++ K KD E +GSDGD E E EL SIVA
Sbjct: 532 YLAENKLKDSERTVDGSDGDPEVETELSSIVA 563
>ref|XP_002272792.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 1 [Vitis vinifera]
Length = 583
Score = 693 bits (1789), Expect = 0.0
Identities = 392/585 (67%), Positives = 441/585 (75%), Gaps = 33/585 (5%)
Frame = -1
Query: 1807 MAAALRAKSCRNAYLFTVSQFRFSVLNPIHAGVRTASFQ----------TSSRTRFDDHF 1658
MAAALR+KS R L T SQFR+ +LN +HAG S+ T S T + HF
Sbjct: 1 MAAALRSKSSRETALLTFSQFRYFILNHMHAGRLPNSYISHKPNCDHCFTHSHTPY--HF 58
Query: 1657 TSDKPV-----IVDRCSDDF------KYWKSFNRRLNIS-----SAYGDPPEVWQPPGDG 1526
TS KPV +VD+ + F K S N +S +++GDPPEVW GDG
Sbjct: 59 TSFKPVSLRGELVDKGLEFFDNQRFSKVGFSTNESKKLSRDTILNSFGDPPEVWS--GDG 116
Query: 1525 IVVRPGVKFVQVPDRDXXXXXXXXXXXS-----KDESWGGSGMGNAFPTPKEICKGLDRF 1361
IVVR G + KDESWGGS +G+ FPTPKEIC+GLD+F
Sbjct: 117 IVVRQGGSGSNLVRGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDKF 176
Query: 1360 VIGQERAKKVLAVAVYNHYKRISGGTSEK-SAGNSGNDKTNALDIDVVELEKSNILMMGP 1184
VIGQERAKKVL+VAVYNHYKRI + +K A ++ +DK A D D VELEKSNIL+MGP
Sbjct: 177 VIGQERAKKVLSVAVYNHYKRIYHQSLQKWPAEDTSDDKAEATDNDSVELEKSNILLMGP 236
Query: 1183 TGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGI 1004
TGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL VADYNVAAAQQGI
Sbjct: 237 TGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGI 296
Query: 1003 VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDT 824
VYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDT
Sbjct: 297 VYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDT 356
Query: 823 KDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRXXXXXXXXXXXSLLDTVESSDL 644
KDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMR SLL+TVESSDL
Sbjct: 357 KDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGPTDAAVASSLLETVESSDL 416
Query: 643 IAYGLIPEFVGRFPILVNLSALTEDQLVQVLTEPKNALGKQYKKMFQMNGVNLHFTEGAL 464
I+YGLIPEFVGRFPILV+LSALTE+QLV+VLTEPKNALGKQYKKMFQMNGV LHFT+ AL
Sbjct: 417 ISYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTKNAL 476
Query: 463 RMIARKAITKNTGARGLRSLLESILMDSMYEIPDERTGXXXXXXXXXXXXXXASEGRGYG 284
R+I+RKA++KNTGARGLRS+LE+ILM++MYEIPD RTG S+G G+G
Sbjct: 477 RLISRKAMSKNTGARGLRSILENILMNAMYEIPDVRTGNDIIDAVVVDDEAVGSDGHGFG 536
Query: 283 AKILHGRGALTNFLSQQKSKDMEPNAEG-SDGDQEGEAELPSIVA 152
AKIL+G+GAL +LSQ K K+ E EG SDG+ E EAE+PSIVA
Sbjct: 537 AKILYGKGALDCYLSQHKLKETETPMEGSSDGEAEAEAEIPSIVA 581
>ref|XP_003634146.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 2 [Vitis vinifera]
Length = 577
Score = 690 bits (1781), Expect = 0.0
Identities = 391/584 (66%), Positives = 438/584 (75%), Gaps = 32/584 (5%)
Frame = -1
Query: 1807 MAAALRAKSCRNAYLFTVSQFRFSVLNPIHAGVRTASFQ----------TSSRTRFDDHF 1658
MAAALR+KS R L T SQFR+ +LN +HAG S+ T S T + HF
Sbjct: 1 MAAALRSKSSRETALLTFSQFRYFILNHMHAGRLPNSYISHKPNCDHCFTHSHTPY--HF 58
Query: 1657 TSDKPV-----IVDRCSDDF------KYWKSFNRRLNIS-----SAYGDPPEVWQPPGDG 1526
TS KPV +VD+ + F K S N +S +++GDPPEVW GDG
Sbjct: 59 TSFKPVSLRGELVDKGLEFFDNQRFSKVGFSTNESKKLSRDTILNSFGDPPEVWS--GDG 116
Query: 1525 IVVRPGVKFVQVPDRDXXXXXXXXXXXS-----KDESWGGSGMGNAFPTPKEICKGLDRF 1361
IVVR G + KDESWGGS +G+ FPTPKEIC+GLD+F
Sbjct: 117 IVVRQGGSGSNLVRGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDKF 176
Query: 1360 VIGQERAKKVLAVAVYNHYKRISGGTSEKSAGNSGNDKTNALDIDVVELEKSNILMMGPT 1181
VIGQERAKKVL+VAVYNHYKRI + +K +DK A D D VELEKSNIL+MGPT
Sbjct: 177 VIGQERAKKVLSVAVYNHYKRIYHQSLQKC-----DDKAEATDNDSVELEKSNILLMGPT 231
Query: 1180 GSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIV 1001
GSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL VADYNVAAAQQGIV
Sbjct: 232 GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIV 291
Query: 1000 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTK 821
YIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTK
Sbjct: 292 YIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTK 351
Query: 820 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRXXXXXXXXXXXSLLDTVESSDLI 641
DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMR SLL+TVESSDLI
Sbjct: 352 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGPTDAAVASSLLETVESSDLI 411
Query: 640 AYGLIPEFVGRFPILVNLSALTEDQLVQVLTEPKNALGKQYKKMFQMNGVNLHFTEGALR 461
+YGLIPEFVGRFPILV+LSALTE+QLV+VLTEPKNALGKQYKKMFQMNGV LHFT+ ALR
Sbjct: 412 SYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTKNALR 471
Query: 460 MIARKAITKNTGARGLRSLLESILMDSMYEIPDERTGXXXXXXXXXXXXXXASEGRGYGA 281
+I+RKA++KNTGARGLRS+LE+ILM++MYEIPD RTG S+G G+GA
Sbjct: 472 LISRKAMSKNTGARGLRSILENILMNAMYEIPDVRTGNDIIDAVVVDDEAVGSDGHGFGA 531
Query: 280 KILHGRGALTNFLSQQKSKDMEPNAEG-SDGDQEGEAELPSIVA 152
KIL+G+GAL +LSQ K K+ E EG SDG+ E EAE+PSIVA
Sbjct: 532 KILYGKGALDCYLSQHKLKETETPMEGSSDGEAEAEAEIPSIVA 575
>emb|CBI23009.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 690 bits (1781), Expect = 0.0
Identities = 391/585 (66%), Positives = 440/585 (75%), Gaps = 33/585 (5%)
Frame = -1
Query: 1807 MAAALRAKSCRNAYLFTVSQFRFSVLNPIHAGVRTASFQ----------TSSRTRFDDHF 1658
MAAALR+KS R L T SQFR+ +LN +HAG S+ T S T + HF
Sbjct: 1 MAAALRSKSSRETALLTFSQFRYFILNHMHAGRLPNSYISHKPNCDHCFTHSHTPY--HF 58
Query: 1657 TSDKPV-----IVDRCSDDF------KYWKSFNRRLNIS-----SAYGDPPEVWQPPGDG 1526
TS KPV +VD+ + F K S N +S +++GDPPEVW GDG
Sbjct: 59 TSFKPVSLRGELVDKGLEFFDNQRFSKVGFSTNESKKLSRDTILNSFGDPPEVWS--GDG 116
Query: 1525 IVVRPGVKFVQVPDRDXXXXXXXXXXXS-----KDESWGGSGMGNAFPTPKEICKGLDRF 1361
IVVR G + KDESWGGS +G+ FPTPKEIC+GLD+F
Sbjct: 117 IVVRQGGSGSNLVRGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDKF 176
Query: 1360 VIGQERAKKVLAVAVYNHYKRISGGTSEK-SAGNSGNDKTNALDIDVVELEKSNILMMGP 1184
VIGQERAKKVL+VAVYNHYKRI + +K A ++ +DK A D D VELEKSNIL+MGP
Sbjct: 177 VIGQERAKKVLSVAVYNHYKRIYHQSLQKWPAEDTSDDKAEATDNDSVELEKSNILLMGP 236
Query: 1183 TGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGI 1004
TGSGKTLLAKTLAR VNVPFVIADATTLTQA YVGEDVESILYKLL VADYNVAAAQQGI
Sbjct: 237 TGSGKTLLAKTLARFVNVPFVIADATTLTQARYVGEDVESILYKLLMVADYNVAAAQQGI 296
Query: 1003 VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDT 824
VYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDT
Sbjct: 297 VYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDT 356
Query: 823 KDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRXXXXXXXXXXXSLLDTVESSDL 644
KDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMR SLL+TVESSDL
Sbjct: 357 KDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGPTDAAVASSLLETVESSDL 416
Query: 643 IAYGLIPEFVGRFPILVNLSALTEDQLVQVLTEPKNALGKQYKKMFQMNGVNLHFTEGAL 464
I+YGLIPEFVGRFPILV+LSALTE+QLV+VLTEPKNALGKQYKKMFQMNGV LHFT+ AL
Sbjct: 417 ISYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTKNAL 476
Query: 463 RMIARKAITKNTGARGLRSLLESILMDSMYEIPDERTGXXXXXXXXXXXXXXASEGRGYG 284
R+I+RKA++KNTGARGLRS+LE+ILM++MYEIPD RTG S+G G+G
Sbjct: 477 RLISRKAMSKNTGARGLRSILENILMNAMYEIPDVRTGNDIIDAVVVDDEAVGSDGHGFG 536
Query: 283 AKILHGRGALTNFLSQQKSKDMEPNAEG-SDGDQEGEAELPSIVA 152
AKIL+G+GAL +LSQ K K+ E EG SDG+ E EAE+PSIVA
Sbjct: 537 AKILYGKGALDCYLSQHKLKETETPMEGSSDGEAEAEAEIPSIVA 581
>ref|XP_002864237.1| hypothetical protein ARALYDRAFT_918413 [Arabidopsis lyrata subsp.
lyrata] gi|297310072|gb|EFH40496.1| hypothetical protein
ARALYDRAFT_918413 [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 685 bits (1768), Expect = 0.0
Identities = 377/570 (66%), Positives = 431/570 (75%), Gaps = 18/570 (3%)
Frame = -1
Query: 1807 MAAALRAKSCRNAYLFTVSQFRFSVLNPIHAGVRTASFQTSSRTRFDDHFTSDKPVIVDR 1628
MAAALR+ + R T+SQFR+ N IH S Q + R++ + +S +D
Sbjct: 1 MAAALRSNTSRETASLTLSQFRYFFFNRIHTARTATSPQCNHRSKSPNKISSLGTSFLDN 60
Query: 1627 CSDDFKYWKSF--NRRLN-------ISSAYGDPPEVWQPPGDGIVVRPGVKFVQVP---- 1487
+ + + +++LN + S+ GDPP++WQPPGDG+ VR V +
Sbjct: 61 RGGERRNSTNCYASQKLNGVGSSVVMLSSQGDPPDLWQPPGDGVSVRVNGSSVNLGRGGG 120
Query: 1486 --DRDXXXXXXXXXXXSKDESWGGSGMGNAFPTPKEICKGLDRFVIGQERAKKVLAVAVY 1313
SK++ WGGS +G+ FPTPKEICKGL++FVIGQERAKKVL+VAVY
Sbjct: 121 GGGSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVY 180
Query: 1312 NHYKRISGGTSEK-SAGNSGNDKTNALDIDVVELEKSNILMMGPTGSGKTLLAKTLARLV 1136
NHYKRI +S+K SAG + + D D+VELEKSNIL+MGPTGSGKTLLAKTLAR V
Sbjct: 181 NHYKRIYHESSQKRSAGETDSTAVKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFV 240
Query: 1135 NVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESL 956
NVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESL
Sbjct: 241 NVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESL 300
Query: 955 NISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEK 776
NISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAF+D+EK
Sbjct: 301 NISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEK 360
Query: 775 TISERRQDSSIGFGAPVRANMRXXXXXXXXXXXSLLDTVESSDLIAYGLIPEFVGRFPIL 596
TISERR DSSIGFGAPVRANMR +L++TVESSDLIAYGLIPEFVGRFP+L
Sbjct: 361 TISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVESSDLIAYGLIPEFVGRFPVL 420
Query: 595 VNLSALTEDQLVQVLTEPKNALGKQYKKMFQMNGVNLHFTEGALRMIARKAITKNTGARG 416
V+LSALTE+QL+QVLTEPKNALGKQYKKM+QMN V LHFTE ALR+IARKAITKNTGARG
Sbjct: 421 VSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTESALRLIARKAITKNTGARG 480
Query: 415 LRSLLESILMDSMYEIPDERTGXXXXXXXXXXXXXXASEG-RGYGAKILHGRGALTNFLS 239
LRSLLESILMDSMYEIPDE TG EG RG GAKIL G+GAL +LS
Sbjct: 481 LRSLLESILMDSMYEIPDESTGSDMIEAVVVDEEAVEGEGRRGSGAKILRGKGALGRYLS 540
Query: 238 QQKSKDM-EPNAEGSDGDQEGEAELPSIVA 152
+ KSKD + +GSDG+ E EAE+PS+VA
Sbjct: 541 ETKSKDSPQTTKDGSDGETEVEAEIPSVVA 570