BLASTX nr result

ID: Bupleurum21_contig00006173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006173
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519497.1| conserved hypothetical protein [Ricinus comm...    92   6e-17
ref|XP_002864205.1| thylakoid lumen 15.0 kDa protein [Arabidopsi...    91   7e-17
gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]       91   1e-16
ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_004156281.1| PREDICTED: thylakoid lumenal 15.0 kDa protei...    89   5e-16

>ref|XP_002519497.1| conserved hypothetical protein [Ricinus communis]
           gi|223541360|gb|EEF42911.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/87 (54%), Positives = 54/87 (62%)
 Frame = -2

Query: 263 EHTQNLKKWVASFGXXXXXXXXXXXXXXXXXXTGVGFAEAKAGVNKPELLPKDFTPLIDV 84
           +++     WV  F                   +GV FAEAK GVNKPELLPK+FT +IDV
Sbjct: 35  QNSTKFSNWVVDFRSKTLKFLLSGALTLGLSLSGVEFAEAKVGVNKPELLPKEFTTVIDV 94

Query: 83  AGFLSDGQENRIVQEINAIEKDTGFKL 3
           AGFLSDGQE R+ QEI  IEKDTGFKL
Sbjct: 95  AGFLSDGQEKRLAQEIQDIEKDTGFKL 121


>ref|XP_002864205.1| thylakoid lumen 15.0 kDa protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310040|gb|EFH40464.1| thylakoid lumen 15.0 kDa
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 222

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/81 (58%), Positives = 54/81 (66%)
 Frame = -2

Query: 245 KKWVASFGXXXXXXXXXXXXXXXXXXTGVGFAEAKAGVNKPELLPKDFTPLIDVAGFLSD 66
           + WV+ F                   +GVGFAEAK GVNKPELLPK+FT +IDVAGFLS+
Sbjct: 41  ENWVSRFRSKSLSLVFSGALALGLSISGVGFAEAKVGVNKPELLPKEFTSVIDVAGFLSN 100

Query: 65  GQENRIVQEINAIEKDTGFKL 3
           GQE RI QEI  +EKDTGFKL
Sbjct: 101 GQEKRIAQEIANLEKDTGFKL 121


>gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 220

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/92 (54%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
 Frame = -2

Query: 269 SSEHTQN---LKKWVASFGXXXXXXXXXXXXXXXXXXTGVGFAEAKAGVNKPELLPKDFT 99
           SS   QN     KWV  F                    GVG A+AK GVNKPELLPK+FT
Sbjct: 28  SSRPIQNPAKFTKWVLDFRSKSLNFAFSGALALGLSLPGVGVADAKVGVNKPELLPKEFT 87

Query: 98  PLIDVAGFLSDGQENRIVQEINAIEKDTGFKL 3
            +IDVAGFLSDGQE R+ +EI+ IEKDTGFKL
Sbjct: 88  TVIDVAGFLSDGQEKRLAEEISDIEKDTGFKL 119


>ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|222867520|gb|EEF04651.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/54 (77%), Positives = 48/54 (88%)
 Frame = -2

Query: 164 GVGFAEAKAGVNKPELLPKDFTPLIDVAGFLSDGQENRIVQEINAIEKDTGFKL 3
           GVG A+AK GVNKPELLPK+FT +IDVAGFLSDGQE R+ +EI+ IEKDTGFKL
Sbjct: 61  GVGVADAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAEEISDIEKDTGFKL 114


>ref|XP_004156281.1| PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like
           [Cucumis sativus]
          Length = 228

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/54 (79%), Positives = 48/54 (88%)
 Frame = -2

Query: 164 GVGFAEAKAGVNKPELLPKDFTPLIDVAGFLSDGQENRIVQEINAIEKDTGFKL 3
           GVGFA+AK GVNKPELLPK+FT +IDVAGFLSDGQE R+ QEI  IEKDTG+KL
Sbjct: 74  GVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKL 127


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