BLASTX nr result

ID: Bupleurum21_contig00006172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006172
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519497.1| conserved hypothetical protein [Ricinus comm...   126   2e-27
gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]      124   6e-27
ref|XP_002864205.1| thylakoid lumen 15.0 kDa protein [Arabidopsi...   122   2e-26
ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_004156281.1| PREDICTED: thylakoid lumenal 15.0 kDa protei...   120   2e-25

>ref|XP_002519497.1| conserved hypothetical protein [Ricinus communis]
           gi|223541360|gb|EEF42911.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/105 (60%), Positives = 72/105 (68%)
 Frame = -3

Query: 316 EHTQNLKKWVTSFGXXXXXXXXXXXXXXXXXXTGVGFAEAKVGVNKPELLPNDFTPLIDV 137
           +++     WV  F                   +GV FAEAKVGVNKPELLP +FT +IDV
Sbjct: 35  QNSTKFSNWVVDFRSKTLKFLLSGALTLGLSLSGVEFAEAKVGVNKPELLPKEFTTVIDV 94

Query: 136 AGFLSDGQENRIVQEINAIEKDTGFKLRVLAQNYPDTPGLAIKDY 2
           AGFLSDGQE R+ QEI  IEKDTGFKLRVLAQNYPDTPGLAIKD+
Sbjct: 95  AGFLSDGQEKRLAQEIQDIEKDTGFKLRVLAQNYPDTPGLAIKDF 139


>gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 220

 Score =  124 bits (312), Expect = 6e-27
 Identities = 66/110 (60%), Positives = 74/110 (67%), Gaps = 3/110 (2%)
 Frame = -3

Query: 322 SSEHTQN---LKKWVTSFGXXXXXXXXXXXXXXXXXXTGVGFAEAKVGVNKPELLPNDFT 152
           SS   QN     KWV  F                    GVG A+AKVGVNKPELLP +FT
Sbjct: 28  SSRPIQNPAKFTKWVLDFRSKSLNFAFSGALALGLSLPGVGVADAKVGVNKPELLPKEFT 87

Query: 151 PLIDVAGFLSDGQENRIVQEINAIEKDTGFKLRVLAQNYPDTPGLAIKDY 2
            +IDVAGFLSDGQE R+ +EI+ IEKDTGFKLRVLAQNYPDTPGLAI+D+
Sbjct: 88  TVIDVAGFLSDGQEKRLAEEISDIEKDTGFKLRVLAQNYPDTPGLAIRDF 137


>ref|XP_002864205.1| thylakoid lumen 15.0 kDa protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310040|gb|EFH40464.1| thylakoid lumen 15.0 kDa
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 222

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/99 (63%), Positives = 71/99 (71%)
 Frame = -3

Query: 298 KKWVTSFGXXXXXXXXXXXXXXXXXXTGVGFAEAKVGVNKPELLPNDFTPLIDVAGFLSD 119
           + WV+ F                   +GVGFAEAKVGVNKPELLP +FT +IDVAGFLS+
Sbjct: 41  ENWVSRFRSKSLSLVFSGALALGLSISGVGFAEAKVGVNKPELLPKEFTSVIDVAGFLSN 100

Query: 118 GQENRIVQEINAIEKDTGFKLRVLAQNYPDTPGLAIKDY 2
           GQE RI QEI  +EKDTGFKLRVLAQNYP TPGLAIKD+
Sbjct: 101 GQEKRIAQEIANLEKDTGFKLRVLAQNYPVTPGLAIKDF 139


>ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|222867520|gb|EEF04651.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/72 (80%), Positives = 66/72 (91%)
 Frame = -3

Query: 217 GVGFAEAKVGVNKPELLPNDFTPLIDVAGFLSDGQENRIVQEINAIEKDTGFKLRVLAQN 38
           GVG A+AKVGVNKPELLP +FT +IDVAGFLSDGQE R+ +EI+ IEKDTGFKLRVLAQN
Sbjct: 61  GVGVADAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAEEISDIEKDTGFKLRVLAQN 120

Query: 37  YPDTPGLAIKDY 2
           YPDTPGLAI+D+
Sbjct: 121 YPDTPGLAIRDF 132


>ref|XP_004156281.1| PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like
           [Cucumis sativus]
          Length = 228

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/72 (81%), Positives = 65/72 (90%)
 Frame = -3

Query: 217 GVGFAEAKVGVNKPELLPNDFTPLIDVAGFLSDGQENRIVQEINAIEKDTGFKLRVLAQN 38
           GVGFA+AKVGVNKPELLP +FT +IDVAGFLSDGQE R+ QEI  IEKDTG+KLRVLAQN
Sbjct: 74  GVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQN 133

Query: 37  YPDTPGLAIKDY 2
           YP TPGLAIKD+
Sbjct: 134 YPVTPGLAIKDF 145


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