BLASTX nr result

ID: Bupleurum21_contig00006171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006171
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282285.1| PREDICTED: thylakoid lumenal 15.0 kDa protei...   262   3e-68
ref|XP_002519497.1| conserved hypothetical protein [Ricinus comm...   261   6e-68
ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|2...   261   7e-68
gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]      261   7e-68
gb|AFK45260.1| unknown [Lotus japonicus]                              256   2e-66

>ref|XP_002282285.1| PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic
           [Vitis vinifera] gi|297741641|emb|CBI32773.3| unnamed
           protein product [Vitis vinifera]
          Length = 220

 Score =  262 bits (670), Expect = 3e-68
 Identities = 133/185 (71%), Positives = 143/185 (77%)
 Frame = -2

Query: 568 EAKVGVNKPELLPKDFTPLIDVAGFLSDGQENRIVQEINAIEKDTGFKLRVLAQNYPDTP 389
           EAKVGVNKP+LLPK+F+ +IDVAGFLSDGQE R+ QEI  IEKDTGFKLRVLAQNYPDTP
Sbjct: 71  EAKVGVNKPDLLPKEFSSVIDVAGFLSDGQEKRLAQEITNIEKDTGFKLRVLAQNYPDTP 130

Query: 388 GLAIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAIKDYWQVDDRTIVFVADPTFGN 209
           GLAI                                   K++WQVDDRTIVFVADPTFGN
Sbjct: 131 GLAI-----------------------------------KEFWQVDDRTIVFVADPTFGN 155

Query: 208 ILNFNVGDLVDLDIPRSFWSRLAGKYGNMFYWKEQGEDASIEAAVMAISNCLREPVGPNN 29
           ILNFNVG  VDLDIPRSFWSRLAGKYGN+FYWKE+GEDASIEAAVMAISNCLREPVGPNN
Sbjct: 156 ILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIEAAVMAISNCLREPVGPNN 215

Query: 28  CSEIK 14
           CSE+K
Sbjct: 216 CSEVK 220


>ref|XP_002519497.1| conserved hypothetical protein [Ricinus communis]
           gi|223541360|gb|EEF42911.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score =  261 bits (667), Expect = 6e-68
 Identities = 132/184 (71%), Positives = 142/184 (77%)
 Frame = -2

Query: 568 EAKVGVNKPELLPKDFTPLIDVAGFLSDGQENRIVQEINAIEKDTGFKLRVLAQNYPDTP 389
           EAKVGVNKPELLPK+FT +IDVAGFLSDGQE R+ QEI  IEKDTGFKLRVLAQNYPDTP
Sbjct: 73  EAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAQEIQDIEKDTGFKLRVLAQNYPDTP 132

Query: 388 GLAIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAIKDYWQVDDRTIVFVADPTFGN 209
           GLAI                                   KD+W+VDDRTIVFVADPTFGN
Sbjct: 133 GLAI-----------------------------------KDFWRVDDRTIVFVADPTFGN 157

Query: 208 ILNFNVGDLVDLDIPRSFWSRLAGKYGNMFYWKEQGEDASIEAAVMAISNCLREPVGPNN 29
           ILNFNVG  +DLDIPRSFWSRLAGKYGN+FYWKE+GEDASIE+AVMAISNCLREPVGPNN
Sbjct: 158 ILNFNVGASIDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAVMAISNCLREPVGPNN 217

Query: 28  CSEI 17
           CSE+
Sbjct: 218 CSEL 221


>ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|222867520|gb|EEF04651.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  261 bits (666), Expect = 7e-68
 Identities = 131/185 (70%), Positives = 143/185 (77%)
 Frame = -2

Query: 568 EAKVGVNKPELLPKDFTPLIDVAGFLSDGQENRIVQEINAIEKDTGFKLRVLAQNYPDTP 389
           +AKVGVNKPELLPK+FT +IDVAGFLSDGQE R+ +EI+ IEKDTGFKLRVLAQNYPDTP
Sbjct: 66  DAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAEEISDIEKDTGFKLRVLAQNYPDTP 125

Query: 388 GLAIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAIKDYWQVDDRTIVFVADPTFGN 209
           GLAI                                   +D+WQVDDRT+VFVADP FGN
Sbjct: 126 GLAI-----------------------------------RDFWQVDDRTVVFVADPNFGN 150

Query: 208 ILNFNVGDLVDLDIPRSFWSRLAGKYGNMFYWKEQGEDASIEAAVMAISNCLREPVGPNN 29
           ILNFNVG  VDLDIPRSFWSRLAGKYGNMFYWKE+GEDASIEAAVMAIS+CLREPVGPNN
Sbjct: 151 ILNFNVGASVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNN 210

Query: 28  CSEIK 14
           CSE+K
Sbjct: 211 CSEVK 215


>gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 220

 Score =  261 bits (666), Expect = 7e-68
 Identities = 131/185 (70%), Positives = 143/185 (77%)
 Frame = -2

Query: 568 EAKVGVNKPELLPKDFTPLIDVAGFLSDGQENRIVQEINAIEKDTGFKLRVLAQNYPDTP 389
           +AKVGVNKPELLPK+FT +IDVAGFLSDGQE R+ +EI+ IEKDTGFKLRVLAQNYPDTP
Sbjct: 71  DAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAEEISDIEKDTGFKLRVLAQNYPDTP 130

Query: 388 GLAIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAIKDYWQVDDRTIVFVADPTFGN 209
           GLAI                                   +D+WQVDDRT+VFVADP FGN
Sbjct: 131 GLAI-----------------------------------RDFWQVDDRTVVFVADPNFGN 155

Query: 208 ILNFNVGDLVDLDIPRSFWSRLAGKYGNMFYWKEQGEDASIEAAVMAISNCLREPVGPNN 29
           ILNFNVG  VDLDIPRSFWSRLAGKYGNMFYWKE+GEDASIEAAVMAIS+CLREPVGPNN
Sbjct: 156 ILNFNVGASVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNN 215

Query: 28  CSEIK 14
           CSE+K
Sbjct: 216 CSEVK 220


>gb|AFK45260.1| unknown [Lotus japonicus]
          Length = 239

 Score =  256 bits (654), Expect = 2e-66
 Identities = 128/183 (69%), Positives = 141/183 (77%)
 Frame = -2

Query: 565 AKVGVNKPELLPKDFTPLIDVAGFLSDGQENRIVQEINAIEKDTGFKLRVLAQNYPDTPG 386
           AKVGVNKPELLPK+F+ +IDVAGFLSDGQE R+ QEI AIEKDTGFKLRVLAQNYPDTPG
Sbjct: 91  AKVGVNKPELLPKEFSTVIDVAGFLSDGQEKRLAQEIAAIEKDTGFKLRVLAQNYPDTPG 150

Query: 385 LAIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAIKDYWQVDDRTIVFVADPTFGNI 206
           LA+                                   KD+WQVDDRTIVFVADPTFGNI
Sbjct: 151 LAV-----------------------------------KDFWQVDDRTIVFVADPTFGNI 175

Query: 205 LNFNVGDLVDLDIPRSFWSRLAGKYGNMFYWKEQGEDASIEAAVMAISNCLREPVGPNNC 26
           LNFNVG  VDLDIPRSFW RLAGKYGN+FYW+++GEDAS+EAAVMAIS+CLREPVGPNNC
Sbjct: 176 LNFNVGASVDLDIPRSFWGRLAGKYGNIFYWRDKGEDASVEAAVMAISSCLREPVGPNNC 235

Query: 25  SEI 17
           SE+
Sbjct: 236 SEV 238


Top