BLASTX nr result

ID: Bupleurum21_contig00006150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006150
         (2207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation...   853   0.0  
ref|XP_004134552.1| PREDICTED: eukaryotic translation initiation...   839   0.0  
ref|XP_002509464.1| eukaryotic translation initiation factor 3 s...   838   0.0  
ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation...   820   0.0  
ref|XP_003543041.1| PREDICTED: eukaryotic translation initiation...   801   0.0  

>ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            [Vitis vinifera]
          Length = 567

 Score =  853 bits (2204), Expect = 0.0
 Identities = 436/550 (79%), Positives = 456/550 (82%), Gaps = 2/550 (0%)
 Frame = +3

Query: 96   GFEIAAVPYNPDGWGPLDSSSGAGAAVLPNHPTNVPFAPFSRSDKLGRIADFTXXXXXXX 275
            GFE+ AVP+NPDGWGP +S+S      LPNHP NVPFAPFSRSDKLGRIAD+T       
Sbjct: 4    GFEVGAVPFNPDGWGPPESASPH----LPNHPINVPFAPFSRSDKLGRIADWTRTYNNPS 59

Query: 276  XXXXXXXXXGDSAFDFTGDDSFTGN--ADDDASFRLVDXXXXXXXXXXXXXXXXXXXXXX 449
                      DS FDFTGDDSF     AD+D+SFRLVD                      
Sbjct: 60   RNPLRNP--SDSVFDFTGDDSFGAGIAADEDSSFRLVDGKPPPRPKFGPKWRFQQQRQLP 117

Query: 450  XXXXXXXXXXXXXXXXXXXXXXXXXXXXLYNLNRSGGNNPRREAAVFKSSVDIQPEWNML 629
                                        LYNLNRSGGNN RREAAVFKSSVDIQPEWNML
Sbjct: 118  QRRDEEVEARKREAEKERARRDR-----LYNLNRSGGNNQRREAAVFKSSVDIQPEWNML 172

Query: 630  DQIPFSTFSKLSFSVPEPEDLLMCGGLEFYDRTYDRITPRNERRLERFKNRNFFKVTTTD 809
            DQIPFSTFSKLSFSVPEPEDLL+CG LEFYDR+YDR+TP+NERRLERFKNRNFFKVTTTD
Sbjct: 173  DQIPFSTFSKLSFSVPEPEDLLLCGALEFYDRSYDRVTPKNERRLERFKNRNFFKVTTTD 232

Query: 810  DPVIRRLANEDKATVFATDLILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLA 989
            DPVIRRLANEDKATVFATD ILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLL+
Sbjct: 233  DPVIRRLANEDKATVFATDSILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLS 292

Query: 990  VHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEESNPFANEGEEV 1169
            VHETSQEPLPEAK+DINSAYSLSVEAAYINQNFSQQVL+RDGNKVTFEE NPFANEGEEV
Sbjct: 293  VHETSQEPLPEAKEDINSAYSLSVEAAYINQNFSQQVLIRDGNKVTFEEPNPFANEGEEV 352

Query: 1170 ASVGYRYRRWKLDDDMYLVARCEVQSVVEVNNSRSFLTLNALNEFDPKYSGVEWRRKLET 1349
            ASV YRYRRWKLDDDMYLVARCEVQSVVEVN  RSFLTLNALNEFDPKYSGV+WR+KLET
Sbjct: 353  ASVAYRYRRWKLDDDMYLVARCEVQSVVEVNKQRSFLTLNALNEFDPKYSGVDWRQKLET 412

Query: 1350 QRGAVLATELKNNANKLAKWTAQSLLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKE 1529
            QRGAVLATELKNNANKLAKWTAQ+LLASAD+MKLGYVSRVHPRDHFNHVILAVVGYKP+E
Sbjct: 413  QRGAVLATELKNNANKLAKWTAQALLASADLMKLGYVSRVHPRDHFNHVILAVVGYKPRE 472

Query: 1530 FATQINLNVANMWGIVKSIVDLCMKLKEGKYVLVKDPVKPQVRIYEVPADAFENDYVEEP 1709
            FA QINLN  NMWGI+KSIVDLCMKL EGKYVLVKDP KPQVRIYEVPADAFENDYVEEP
Sbjct: 473  FAAQINLNTTNMWGIIKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEP 532

Query: 1710 LPEDEQVQPP 1739
            LPEDEQVQPP
Sbjct: 533  LPEDEQVQPP 542


>ref|XP_004134552.1| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            [Cucumis sativus] gi|449506762|ref|XP_004162841.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit D-like [Cucumis sativus]
          Length = 566

 Score =  839 bits (2167), Expect = 0.0
 Identities = 431/548 (78%), Positives = 450/548 (82%)
 Frame = +3

Query: 96   GFEIAAVPYNPDGWGPLDSSSGAGAAVLPNHPTNVPFAPFSRSDKLGRIADFTXXXXXXX 275
            GFE+ AVPYNPDGWGP DS++   A+   N P NVPFAPFSRSDKLGRIAD+T       
Sbjct: 4    GFEVGAVPYNPDGWGPPDSTATLVAS--SNLPLNVPFAPFSRSDKLGRIADWTRTMNNPG 61

Query: 276  XXXXXXXXXGDSAFDFTGDDSFTGNADDDASFRLVDXXXXXXXXXXXXXXXXXXXXXXXX 455
                      DS FDFT DDSF  NAD+D SFRLVD                        
Sbjct: 62   RPKTA----SDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQ 117

Query: 456  XXXXXXXXXXXXXXXXXXXXXXXXXXLYNLNRSGGNNPRREAAVFKSSVDIQPEWNMLDQ 635
                                      LYNLNRS  N PRREAAVFKSSV+IQPEWNMLDQ
Sbjct: 118  RRDEEVEARKREAEKERARRDR----LYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQ 173

Query: 636  IPFSTFSKLSFSVPEPEDLLMCGGLEFYDRTYDRITPRNERRLERFKNRNFFKVTTTDDP 815
            IPFSTFSKLSFSVPEPEDLL+CGGLEFYDR YDRITP+NERRLERFKNRNFFKVTTTDDP
Sbjct: 174  IPFSTFSKLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDP 233

Query: 816  VIRRLANEDKATVFATDLILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLAVH 995
            VIRRLANEDKATVFATD ILSTLMCA RSVYSWDIV+QRVGNKLFFDKRDGSQLDLLAVH
Sbjct: 234  VIRRLANEDKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVH 293

Query: 996  ETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEESNPFANEGEEVAS 1175
            ETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKV F+E NPFANEGEEVAS
Sbjct: 294  ETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVAS 353

Query: 1176 VGYRYRRWKLDDDMYLVARCEVQSVVEVNNSRSFLTLNALNEFDPKYSGVEWRRKLETQR 1355
            V YRYRRWKLDDDMYLVARCEVQSV+EVN  RSFLTLNALNEFDPKYSGV+WR+KLETQR
Sbjct: 354  VAYRYRRWKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQR 413

Query: 1356 GAVLATELKNNANKLAKWTAQSLLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKEFA 1535
            GAVLATELKNNANKLAKWTAQ+LLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPK+FA
Sbjct: 414  GAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFA 473

Query: 1536 TQINLNVANMWGIVKSIVDLCMKLKEGKYVLVKDPVKPQVRIYEVPADAFENDYVEEPLP 1715
             QINLN +NMWGIVKSIVDLCMKL EGKYVLVKDP KPQVRIYEVPADAFENDYVEEPL 
Sbjct: 474  GQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLA 533

Query: 1716 EDEQVQPP 1739
            E++QVQPP
Sbjct: 534  EEDQVQPP 541


>ref|XP_002509464.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223549363|gb|EEF50851.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 574

 Score =  838 bits (2164), Expect = 0.0
 Identities = 423/553 (76%), Positives = 452/553 (81%), Gaps = 3/553 (0%)
 Frame = +3

Query: 90   MVGFEIAAVPYNPDGWGPLDSSSGAGAAVLPNHPTNVPFAPFSRSDKLGRIADFTXXXXX 269
            MVGFE+  VP+NPDGWGP D++  + A      P NVPFAPFSRSDKLGRIAD+T     
Sbjct: 1    MVGFEVGFVPFNPDGWGPPDAAFASAATTTSTLPLNVPFAPFSRSDKLGRIADWTRNINP 60

Query: 270  XXXXXXXXXXXGDSAFDFTGDDSF---TGNADDDASFRLVDXXXXXXXXXXXXXXXXXXX 440
                        DS FDFT DDSF   T   DDD++FRLVD                   
Sbjct: 61   NANRPNSKQNASDSVFDFTADDSFPAATAAGDDDSTFRLVDGKPPPRPKFGPKWRFNQHR 120

Query: 441  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYNLNRSGGNNPRREAAVFKSSVDIQPEW 620
                                           LYN+NRS  N PRREAAVFKSSVDIQPEW
Sbjct: 121  QQLPQRRDEEVEARKREAEKERARRDR----LYNMNRSNQNQPRREAAVFKSSVDIQPEW 176

Query: 621  NMLDQIPFSTFSKLSFSVPEPEDLLMCGGLEFYDRTYDRITPRNERRLERFKNRNFFKVT 800
            NMLDQIPFSTFSKLSFSVPEPEDLL+CGGLEFYDR++DRITP+NERRLERFKNRNFFKVT
Sbjct: 177  NMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRSFDRITPKNERRLERFKNRNFFKVT 236

Query: 801  TTDDPVIRRLANEDKATVFATDLILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLD 980
            TTDDPVIRRLANEDKATVFATD IL+TLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLD
Sbjct: 237  TTDDPVIRRLANEDKATVFATDTILATLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLD 296

Query: 981  LLAVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEESNPFANEG 1160
            LL+VHETSQEPLPEAKDD+NSAYSLSVEAAYINQNFSQQVL+RDGNKV+F+E NPFA EG
Sbjct: 297  LLSVHETSQEPLPEAKDDMNSAYSLSVEAAYINQNFSQQVLIRDGNKVSFDEPNPFATEG 356

Query: 1161 EEVASVGYRYRRWKLDDDMYLVARCEVQSVVEVNNSRSFLTLNALNEFDPKYSGVEWRRK 1340
            EEVASV YRYRRWKLDDDM+LVARCEVQSVVEVN  RSFLTLNALNEFDPKYSGV+WR+K
Sbjct: 357  EEVASVAYRYRRWKLDDDMHLVARCEVQSVVEVNKQRSFLTLNALNEFDPKYSGVDWRQK 416

Query: 1341 LETQRGAVLATELKNNANKLAKWTAQSLLASADMMKLGYVSRVHPRDHFNHVILAVVGYK 1520
            LETQRGAVLATELKNNANKLAKWTAQ+LLASAD+MKLGYVSRVHPRDH+NHVILAVVGYK
Sbjct: 417  LETQRGAVLATELKNNANKLAKWTAQALLASADLMKLGYVSRVHPRDHYNHVILAVVGYK 476

Query: 1521 PKEFATQINLNVANMWGIVKSIVDLCMKLKEGKYVLVKDPVKPQVRIYEVPADAFENDYV 1700
            P++FA QINLN +NMWGIVKSIVDLCMKL EGKYVLVKDP KPQVRIYEVPADAFENDYV
Sbjct: 477  PRDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYV 536

Query: 1701 EEPLPEDEQVQPP 1739
            EEPLPE+EQVQPP
Sbjct: 537  EEPLPEEEQVQPP 549


>ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            isoform 1 [Glycine max] gi|356555340|ref|XP_003545991.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit D-like isoform 2 [Glycine max]
          Length = 565

 Score =  820 bits (2118), Expect = 0.0
 Identities = 417/547 (76%), Positives = 445/547 (81%)
 Frame = +3

Query: 99   FEIAAVPYNPDGWGPLDSSSGAGAAVLPNHPTNVPFAPFSRSDKLGRIADFTXXXXXXXX 278
            F+I AVP+N DGWGP D+++        N P NVPFAPFSRSDKLGRIAD+T        
Sbjct: 5    FDIGAVPFNADGWGPPDNATSGSNN--NNLPLNVPFAPFSRSDKLGRIADWTRNFNNPTR 62

Query: 279  XXXXXXXXGDSAFDFTGDDSFTGNADDDASFRLVDXXXXXXXXXXXXXXXXXXXXXXXXX 458
                     D+ FDF  DDSF  +ADDDASFRLVD                         
Sbjct: 63   SKNP----ADAVFDFANDDSFPASADDDASFRLVDGKPPPRPKFGPKWRFQQQRQLPQRR 118

Query: 459  XXXXXXXXXXXXXXXXXXXXXXXXXLYNLNRSGGNNPRREAAVFKSSVDIQPEWNMLDQI 638
                                     LY++NRS  N  RREAAVFKSSVDIQPEWNM DQI
Sbjct: 119  DEEVEAKKREQEKERARRDR-----LYHMNRSNPNQQRREAAVFKSSVDIQPEWNMHDQI 173

Query: 639  PFSTFSKLSFSVPEPEDLLMCGGLEFYDRTYDRITPRNERRLERFKNRNFFKVTTTDDPV 818
            PFSTFSKLSF+VPEPEDLL+CG LE+YDRTYDRITP+NERRLERFKNRNFFKVTTTDDPV
Sbjct: 174  PFSTFSKLSFTVPEPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPV 233

Query: 819  IRRLANEDKATVFATDLILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLAVHE 998
            IRRLANEDKATVFATD ILSTLMCAPRSVYSWDIV+QRVGNKLFFDKRDGSQLDLL+VHE
Sbjct: 234  IRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHE 293

Query: 999  TSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEESNPFANEGEEVASV 1178
            TSQEPLPE+KDDINSA+SLSVEAAYINQNFSQQVL+RDGNKVTF+E+NPFANEGEEVASV
Sbjct: 294  TSQEPLPESKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASV 353

Query: 1179 GYRYRRWKLDDDMYLVARCEVQSVVEVNNSRSFLTLNALNEFDPKYSGVEWRRKLETQRG 1358
             YRYRRWKLDDDMYLVARCEV SVV+VN  RSFLTLNALNEFDPKYSGV+WR+KLETQRG
Sbjct: 354  AYRYRRWKLDDDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRG 413

Query: 1359 AVLATELKNNANKLAKWTAQSLLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKEFAT 1538
            AVLATELKNNANKLAKWTAQ+LLASAD MKLGYVSR+HPRDHFNHVILAVVGYKP++FA 
Sbjct: 414  AVLATELKNNANKLAKWTAQALLASADTMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAA 473

Query: 1539 QINLNVANMWGIVKSIVDLCMKLKEGKYVLVKDPVKPQVRIYEVPADAFENDYVEEPLPE 1718
            QINLN  NMWGIVKSIVDLCMKL EGKYVLVKDP KPQVRIYEVPADAFENDYVEEPLPE
Sbjct: 474  QINLNTTNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPE 533

Query: 1719 DEQVQPP 1739
            DEQVQPP
Sbjct: 534  DEQVQPP 540


>ref|XP_003543041.1| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            [Glycine max]
          Length = 557

 Score =  801 bits (2068), Expect = 0.0
 Identities = 411/547 (75%), Positives = 441/547 (80%)
 Frame = +3

Query: 99   FEIAAVPYNPDGWGPLDSSSGAGAAVLPNHPTNVPFAPFSRSDKLGRIADFTXXXXXXXX 278
            F+I AVP+N +GWGP DS+   G+ +  N P NVPFAPFSRSDKLGRIAD+T        
Sbjct: 5    FDIGAVPFNAEGWGPPDSTI-TGSNI--NLPLNVPFAPFSRSDKLGRIADWTRNFNNPTR 61

Query: 279  XXXXXXXXGDSAFDFTGDDSFTGNADDDASFRLVDXXXXXXXXXXXXXXXXXXXXXXXXX 458
                     D+ FDFT DD       DD +F LVD                         
Sbjct: 62   SKNP----ADAVFDFTNDD-------DDDTFHLVDPKPPPRPKFGPKWRFPQQRQLPQRR 110

Query: 459  XXXXXXXXXXXXXXXXXXXXXXXXXLYNLNRSGGNNPRREAAVFKSSVDIQPEWNMLDQI 638
                                     LY++NRS  N  RREAAVFKSSVDIQPEWNM DQI
Sbjct: 111  DEEVEAKKREQEKERARRDR-----LYHMNRSNPNQQRREAAVFKSSVDIQPEWNMHDQI 165

Query: 639  PFSTFSKLSFSVPEPEDLLMCGGLEFYDRTYDRITPRNERRLERFKNRNFFKVTTTDDPV 818
            PFSTFSKLSF+VPEPEDLL+CG LE+YDRTYDRITP+NERRLERFKNRNFFKVTTTDDP+
Sbjct: 166  PFSTFSKLSFTVPEPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPI 225

Query: 819  IRRLANEDKATVFATDLILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLAVHE 998
            IRRLANEDKATVFATD ILSTLMCAPRSVYSWDIV+QRVGNKLFFDKRDGSQLDLL+VHE
Sbjct: 226  IRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHE 285

Query: 999  TSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVTFEESNPFANEGEEVASV 1178
            TSQEPLPE+KDDINSA+SLSVEAAYINQNFSQQVL+RDGNKVTF+E+NPFANEGEEVASV
Sbjct: 286  TSQEPLPESKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASV 345

Query: 1179 GYRYRRWKLDDDMYLVARCEVQSVVEVNNSRSFLTLNALNEFDPKYSGVEWRRKLETQRG 1358
             YRYRRWKLDDDMYLVARCEV SVV+VN  RSFLTLNALNEFDPKYSGV+WR+KLETQRG
Sbjct: 346  AYRYRRWKLDDDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRG 405

Query: 1359 AVLATELKNNANKLAKWTAQSLLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKEFAT 1538
            AVLATELKNNANKLAKWTAQ+LLASAD MKLGYVSR+HPRDHFNHVILAVVGYKP++FA 
Sbjct: 406  AVLATELKNNANKLAKWTAQALLASADTMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAA 465

Query: 1539 QINLNVANMWGIVKSIVDLCMKLKEGKYVLVKDPVKPQVRIYEVPADAFENDYVEEPLPE 1718
            QINLN  NMWGIVKSIVDLCMKL EGKYVLVKDP KPQVRIYEVPADAFENDYVEEPLPE
Sbjct: 466  QINLNTTNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPE 525

Query: 1719 DEQVQPP 1739
            DEQVQPP
Sbjct: 526  DEQVQPP 532


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