BLASTX nr result

ID: Bupleurum21_contig00006126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006126
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3TUU|A Chain A, Structure Of Dihydrodipicolinate Synthase Fr...   133   2e-29
ref|XP_002279840.1| PREDICTED: dihydrodipicolinate synthase 2, c...   133   2e-29
ref|XP_002521713.1| dihydrodipicolinate synthase, putative [Rici...   130   1e-28
emb|CAB45642.1| dihydrodipicolinate synthase [Arabidopsis thaliana]   124   1e-26
ref|XP_002301301.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26

>pdb|3TUU|A Chain A, Structure Of Dihydrodipicolinate Synthase From The Common
           Grapevine gi|400261064|pdb|3TUU|B Chain B, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261065|pdb|3TUU|C Chain C, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261066|pdb|3TUU|D Chain D, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261067|pdb|3TUU|E Chain E, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261068|pdb|3TUU|F Chain F, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261069|pdb|3TUU|G Chain G, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
           gi|400261070|pdb|3TUU|H Chain H, Structure Of
           Dihydrodipicolinate Synthase From The Common Grapevine
          Length = 346

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/85 (75%), Positives = 71/85 (83%)
 Frame = -2

Query: 292 NPSLNEKLLPLMEWLFEEPNPIGLNTALSQLGVVRPIFRLPYVPLPLAKRVEFVNIVKDI 113
           NPSLN K++PL+ WLFEEPNPIGLNTAL+QLGVVRP+FRLPYVPLPLAKRVEFVNIVK+I
Sbjct: 262 NPSLNAKIMPLVNWLFEEPNPIGLNTALAQLGVVRPVFRLPYVPLPLAKRVEFVNIVKEI 321

Query: 112 GRENFVGEXXXXXXXXXXXXLIGRY 38
           GRENFVGE            L+GRY
Sbjct: 322 GRENFVGEKDVKVLDDDDFILVGRY 346


>ref|XP_002279840.1| PREDICTED: dihydrodipicolinate synthase 2, chloroplastic [Vitis
           vinifera] gi|296089164|emb|CBI38867.3| unnamed protein
           product [Vitis vinifera]
          Length = 365

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/85 (75%), Positives = 71/85 (83%)
 Frame = -2

Query: 292 NPSLNEKLLPLMEWLFEEPNPIGLNTALSQLGVVRPIFRLPYVPLPLAKRVEFVNIVKDI 113
           NPSLN K++PL+ WLFEEPNPIGLNTAL+QLGVVRP+FRLPYVPLPLAKRVEFVNIVK+I
Sbjct: 281 NPSLNAKIMPLVNWLFEEPNPIGLNTALAQLGVVRPVFRLPYVPLPLAKRVEFVNIVKEI 340

Query: 112 GRENFVGEXXXXXXXXXXXXLIGRY 38
           GRENFVGE            L+GRY
Sbjct: 341 GRENFVGEKDVKVLDDDDFILVGRY 365


>ref|XP_002521713.1| dihydrodipicolinate synthase, putative [Ricinus communis]
           gi|223539104|gb|EEF40700.1| dihydrodipicolinate
           synthase, putative [Ricinus communis]
          Length = 367

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/85 (74%), Positives = 71/85 (83%)
 Frame = -2

Query: 292 NPSLNEKLLPLMEWLFEEPNPIGLNTALSQLGVVRPIFRLPYVPLPLAKRVEFVNIVKDI 113
           NP+LN KLLPL++WLF+EPNPIGLNTAL+QLGVVRP+FRLPYVPLPLA+RVEFVN+VK I
Sbjct: 283 NPALNSKLLPLIDWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPLAQRVEFVNLVKAI 342

Query: 112 GRENFVGEXXXXXXXXXXXXLIGRY 38
           GRENFVGE            LIGRY
Sbjct: 343 GRENFVGEKDVRVLDDDDFILIGRY 367


>emb|CAB45642.1| dihydrodipicolinate synthase [Arabidopsis thaliana]
          Length = 364

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/85 (68%), Positives = 70/85 (82%)
 Frame = -2

Query: 292 NPSLNEKLLPLMEWLFEEPNPIGLNTALSQLGVVRPIFRLPYVPLPLAKRVEFVNIVKDI 113
           N +LNEKLLPLM+WLF+EPNPIG+NTAL+QLGV RP+FRLPYVPLPL+KR+EFV +VK+I
Sbjct: 280 NSALNEKLLPLMDWLFQEPNPIGVNTALAQLGVARPVFRLPYVPLPLSKRIEFVKLVKEI 339

Query: 112 GRENFVGEXXXXXXXXXXXXLIGRY 38
           GRE+FVG+            LIGRY
Sbjct: 340 GREHFVGDRDVQVLDDDDFILIGRY 364


>ref|XP_002301301.1| predicted protein [Populus trichocarpa] gi|222843027|gb|EEE80574.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/85 (69%), Positives = 67/85 (78%)
 Frame = -2

Query: 292 NPSLNEKLLPLMEWLFEEPNPIGLNTALSQLGVVRPIFRLPYVPLPLAKRVEFVNIVKDI 113
           N  LN KLLPL++WLF+EPNPI LNTAL+QLGVVRP+FRLPY+PLPLAKR+EFVN+VK I
Sbjct: 281 NSELNSKLLPLIDWLFQEPNPIALNTALAQLGVVRPVFRLPYMPLPLAKRIEFVNLVKKI 340

Query: 112 GRENFVGEXXXXXXXXXXXXLIGRY 38
           GRENFVGE            LI RY
Sbjct: 341 GRENFVGENNVQVLDDDDFILISRY 365


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