BLASTX nr result

ID: Bupleurum21_contig00006125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006125
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70386.1| hypothetical protein VITISV_029656 [Vitis vinifera]   117   5e-24
ref|XP_002329124.1| predicted protein [Populus trichocarpa] gi|2...   103   6e-20
ref|XP_002317485.1| predicted protein [Populus trichocarpa] gi|2...    96   1e-17
ref|XP_002533082.1| conserved hypothetical protein [Ricinus comm...    76   1e-11

>emb|CAN70386.1| hypothetical protein VITISV_029656 [Vitis vinifera]
          Length = 223

 Score =  117 bits (292), Expect = 5e-24
 Identities = 81/211 (38%), Positives = 109/211 (51%), Gaps = 13/211 (6%)
 Frame = -1

Query: 848 QDHD-EFEFELVAPRSPNS---PADHLFSNGRLLPHDFPCPPRKSLSLNTTLCRTMSRTX 681
           QD D EFEF  V P  P+S   PADHLF NG+LLPH FPC   +S S  T + R  SRT 
Sbjct: 19  QDQDSEFEFGCVTPDLPSSKSSPADHLFCNGKLLPHVFPC---QSASPRTDIARANSRTS 75

Query: 680 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVSERRVLMS--RAKSVRKKP---EV 516
                                             D SER    +  +AK V K     + 
Sbjct: 76  SISSKDSLVSSRSNSTSSRSSSCSSARTSSS---DNSERMRAWTTMQAKVVAKTAITRDG 132

Query: 515 YIANRPSLSQQYGN---WQYVTQTPVLTRKLSRKIKGDVGIQRGLKTKEQVDKGKKRSG- 348
           Y+ANRP L+Q YGN   WQ++T  PVL+R+ SR+ +    +Q     +++V   K+R+  
Sbjct: 133 YLANRPVLAQPYGNSQRWQFITPAPVLSREPSRRRRAGAAVQDDQLRQKKVAVEKRRAKP 192

Query: 347 GVFWRFFRWFVSACSECHAINPTRRDTVFQG 255
           G+ WRFFR F+SAC ECHA+ P+R++ +  G
Sbjct: 193 GIGWRFFRLFMSACRECHAMEPSRKENIKSG 223


>ref|XP_002329124.1| predicted protein [Populus trichocarpa] gi|222869793|gb|EEF06924.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  103 bits (257), Expect = 6e-20
 Identities = 77/237 (32%), Positives = 109/237 (45%), Gaps = 14/237 (5%)
 Frame = -1

Query: 911 ENIGQKTKPVDNTLSVEVKP--MQDHDEFEFELVAPRSP------NSPADHLFSNGRLLP 756
           EN  QKT   +   S    P  +    +FEF  + P SP      NSPADHLF NGRLLP
Sbjct: 3   ENHHQKTSSREYIFSFPSTPGTLDQDSDFEFGCLTPDSPSCDPNKNSPADHLFFNGRLLP 62

Query: 755 HDFPCPPRKSLSLNTTLCRTMSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSD 576
           H FP   ++  +    +      T                                  SD
Sbjct: 63  HSFPVLRKQQPTTMLLIDNIYRATSRASSVSCKDSLMSSRSNSTNSSRSSVSSARTSSSD 122

Query: 575 VSERRVLMSRAKSVRKKPEVYIANRPSLSQQYGN---WQYVTQTP--VLTRKLSRKIKGD 411
            SERR L +   S +      +A++  ++Q YG+   WQ++   P  VL R+ SR+  G 
Sbjct: 123 NSERRRLYNNITSTKTP----LASKVVMAQLYGSSQRWQHIMPVPTAVLKREDSRRKSGG 178

Query: 410 VGIQRGL-KTKEQVDKGKKRSGGVFWRFFRWFVSACSECHAINPTRRDTVFQGSINL 243
           + ++ GL   K+QV KGK+   G++ RFF  F+ AC ECHA+ P+ RD + Q +I L
Sbjct: 179 ILVKEGLISNKKQVKKGKRERSGLWRRFFMSFLVACRECHAMEPSTRDDMLQENIKL 235


>ref|XP_002317485.1| predicted protein [Populus trichocarpa] gi|222860550|gb|EEE98097.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 74/239 (30%), Positives = 110/239 (46%), Gaps = 16/239 (6%)
 Frame = -1

Query: 911 ENIGQKTKPVDNTLSVEVKP--MQDHDEFEFELVAPRSPN------SPADHLFSNGRLLP 756
           EN  +KT   ++  S    P  +    +FEF  + P SP+      SPADHLF NGRLLP
Sbjct: 19  ENHHKKTSSREDIFSFPSTPSTLDQDSDFEFGCLTPDSPSRDPNKSSPADHLFFNGRLLP 78

Query: 755 HDFPCPPRKSLSLN--TTLCRTMSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 582
           H FP   ++  ++     + R  SR                                   
Sbjct: 79  HSFPVLQQQPATMLFIDNIYRAPSRASSVSSKDSLMSSRSNSTNSSRSSVSSARTSSS-- 136

Query: 581 SDVSERRVLMSRAKSVRKKPEVYIANRPSLSQQYGN---WQYVTQTPV--LTRKLSRKIK 417
            D SERR L +   S     +  +A++  ++Q YG+   WQ++   P   L R  SR+  
Sbjct: 137 -DNSERRRLYNITSS-----QTPLASKAVIAQLYGSSQRWQHIMPVPAAALKRADSRRKS 190

Query: 416 GDVGIQRGLKT-KEQVDKGKKRSGGVFWRFFRWFVSACSECHAINPTRRDTVFQGSINL 243
           G + ++ GL   K+Q+ KGK+   G + RFFR F+ AC ECHA+ P+ +D +  G+I L
Sbjct: 191 GRILVKEGLSNNKKQIKKGKRDRSGFWRRFFRSFLLACRECHAMEPSTKDDILDGNIKL 249


>ref|XP_002533082.1| conserved hypothetical protein [Ricinus communis]
           gi|223527121|gb|EEF29297.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 260

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 73/264 (27%), Positives = 113/264 (42%), Gaps = 36/264 (13%)
 Frame = -1

Query: 926 LQHSMENIGQKTKPVDNTLSVEVKPMQDHDEFEFELVAP-RSP--NSPADHLFSNGRLLP 756
           ++H  +   ++     +T S + +      +FEF  + P  SP  NSPADHLF NGRLLP
Sbjct: 1   MEHHQKTSSREIFSFPSTPSTQDQDQDQDQDFEFGGLTPDHSPYKNSPADHLFYNGRLLP 60

Query: 755 HDFPCPPRK--------SLSLNTTLCRTMSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           H FP   ++        ++S ++ + RT SR                             
Sbjct: 61  HSFPLQQQQQQQQLSIAAMSFSSNISRTTSRA----SSKDSLMSSRSNSVNSSRSSVSCS 116

Query: 599 XXXXXXSDVSERRVLMSRAKS----VRKKPEVYIANRPSLSQQYGN---WQYVTQ--TPV 447
                 SD SERR+L    K+            +A++  ++Q YG+   WQ++     PV
Sbjct: 117 SARTSSSDSSERRLLYHTRKAGSCRSSSSSSTPMASKVVMAQLYGSSQRWQHIMPGVPPV 176

Query: 446 LTRKLSRK-------------IKGDVGIQRGLKTKEQVDKGK---KRSGGVFWRFFRWFV 315
           L R+ SR+               G V  ++G  +K++ D+ K   K S GV  RF R  +
Sbjct: 177 LKREDSRRKINNNNNNNNNNNNNGGVLGKQGFGSKKEGDQEKRKDKSSSGVCLRFLRSIL 236

Query: 314 SACSECHAINPTRRDTVFQGSINL 243
            AC ECHA+  +  D + Q  I +
Sbjct: 237 VACRECHAMESSLNDDILQERIKV 260


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