BLASTX nr result

ID: Bupleurum21_contig00006121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006121
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera]   106   5e-21
gb|ADN33722.1| zinc finger protein binding protein [Cucumis melo...   105   1e-20
ref|XP_004172392.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   105   2e-20
ref|XP_004142868.1| PREDICTED: uncharacterized protein LOC101203...   105   2e-20
ref|XP_002863715.1| zinc finger family protein [Arabidopsis lyra...    92   1e-16

>emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera]
          Length = 1022

 Score =  106 bits (265), Expect = 5e-21
 Identities = 67/160 (41%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
 Frame = +3

Query: 3    LQDVFDLMSRGESLTFEDVMILDQSVFXXXXXXXXXXXXXXXXX-NMSYEELLALEERIG 179
            +++V DLM RGE L FEDVMILDQSVF                  NMSYEELLALEERIG
Sbjct: 594  IRNVLDLMRRGEDLRFEDVMILDQSVFFGVADIHDRHRDMRLDVDNMSYEELLALEERIG 653

Query: 180  NVNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEY 359
            +V T                                                     +EY
Sbjct: 654  DVCTGLSEEXILKQLKQRKYWSVARGAEVEVEPCCICQ-------------------EEY 694

Query: 360  NVGDNLGELKCGHGFHTECIKQWLKRKNLCPICKTTAIGG 479
              G+++G L+CGH FH  CIKQWL  KNLCPICKTTA+GG
Sbjct: 695  GDGEDIGTLECGHDFHYGCIKQWLMHKNLCPICKTTALGG 734


>gb|ADN33722.1| zinc finger protein binding protein [Cucumis melo subsp. melo]
          Length = 713

 Score =  105 bits (262), Expect = 1e-20
 Identities = 65/162 (40%), Positives = 77/162 (47%), Gaps = 1/162 (0%)
 Frame = +3

Query: 3   LQDVFDLMSRGESLTFEDVMILDQSVFXXXXXXXXXXXXXXXXX-NMSYEELLALEERIG 179
           L++V  L+ RGESL  EDVMILDQS+F                  NMSYEELLALEERIG
Sbjct: 572 LRNVLGLVRRGESLRVEDVMILDQSLFFGMADIYDRHRDMRLDVDNMSYEELLALEERIG 631

Query: 180 NVNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEY 359
           NVNT                                                     +EY
Sbjct: 632 NVNTGLNEETIVARLKQKKHVNAVESQVEEEPCCVCQ--------------------EEY 671

Query: 360 NVGDNLGELKCGHGFHTECIKQWLKRKNLCPICKTTAIGGKE 485
             G+++G L+CGH FHT CIKQWL +KNLCPICKTT +  +E
Sbjct: 672 VEGEDIGTLECGHDFHTACIKQWLMQKNLCPICKTTGLASRE 713


>ref|XP_004172392.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101228751 [Cucumis sativus]
          Length = 713

 Score =  105 bits (261), Expect = 2e-20
 Identities = 65/162 (40%), Positives = 77/162 (47%), Gaps = 1/162 (0%)
 Frame = +3

Query: 3   LQDVFDLMSRGESLTFEDVMILDQSVFXXXXXXXXXXXXXXXXX-NMSYEELLALEERIG 179
           L++V  L+ RGESL  EDVMILDQS+F                  NMSYEELLALEERIG
Sbjct: 572 LRNVLGLVRRGESLRVEDVMILDQSLFFGMADIYDRHRDMRLDVDNMSYEELLALEERIG 631

Query: 180 NVNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEY 359
           NVNT                                                     +EY
Sbjct: 632 NVNTGLNEETIVARLKQKKRVNAVDSQVEEEPCCVCQ--------------------EEY 671

Query: 360 NVGDNLGELKCGHGFHTECIKQWLKRKNLCPICKTTAIGGKE 485
             G+++G L+CGH FHT CIKQWL +KNLCPICKTT +  +E
Sbjct: 672 VDGEDIGTLECGHDFHTACIKQWLMQKNLCPICKTTGLASRE 713


>ref|XP_004142868.1| PREDICTED: uncharacterized protein LOC101203243 [Cucumis sativus]
          Length = 713

 Score =  105 bits (261), Expect = 2e-20
 Identities = 65/162 (40%), Positives = 77/162 (47%), Gaps = 1/162 (0%)
 Frame = +3

Query: 3   LQDVFDLMSRGESLTFEDVMILDQSVFXXXXXXXXXXXXXXXXX-NMSYEELLALEERIG 179
           L++V  L+ RGESL  EDVMILDQS+F                  NMSYEELLALEERIG
Sbjct: 572 LRNVLGLVRRGESLRVEDVMILDQSLFFGMADIYDRHRDMRLDVDNMSYEELLALEERIG 631

Query: 180 NVNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEY 359
           NVNT                                                     +EY
Sbjct: 632 NVNTGLNEETIVARLKQKKRVNAVDSQVEEEPCCVCQ--------------------EEY 671

Query: 360 NVGDNLGELKCGHGFHTECIKQWLKRKNLCPICKTTAIGGKE 485
             G+++G L+CGH FHT CIKQWL +KNLCPICKTT +  +E
Sbjct: 672 VDGEDIGTLECGHDFHTACIKQWLMQKNLCPICKTTGLASRE 713


>ref|XP_002863715.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309550|gb|EFH39974.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 682

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 59/166 (35%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   LQDVFDLMSR--GESLTFEDVMILDQSVFXXXXXXXXXXXXXXXXX--NMSYEELLALEE 170
           +Q+V D+M R    +L  EDVM+L+QSV                    NMSYEELLALEE
Sbjct: 533 MQNVLDVMRREGNNNLRLEDVMLLNQSVLFDGAAGIHDRYRDMRLDVDNMSYEELLALEE 592

Query: 171 RIGNVNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 350
           RIG+V T                                                     
Sbjct: 593 RIGDVCTGVNEETISNRLKQRKYKSNTKSPQDTEPCCICQ-------------------- 632

Query: 351 DEYNVGDNLGELKCGHGFHTECIKQWLKRKNLCPICKTTAIGGKEK 488
           +EYN G+++G L+CGH FH++CIK+WLK+KNLCPICKTT +   +K
Sbjct: 633 EEYNEGEDMGTLECGHEFHSQCIKEWLKQKNLCPICKTTGLNTAKK 678


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