BLASTX nr result

ID: Bupleurum21_contig00006060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006060
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555224.1| PREDICTED: uncharacterized protein LOC100818...   160   8e-38
ref|XP_003535734.1| PREDICTED: putative transcription elongation...   159   2e-37
ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256...   158   5e-37
emb|CBI31409.3| unnamed protein product [Vitis vinifera]              158   5e-37
ref|XP_004172849.1| PREDICTED: putative transcription elongation...   156   1e-36

>ref|XP_003555224.1| PREDICTED: uncharacterized protein LOC100818587 [Glycine max]
          Length = 1495

 Score =  160 bits (406), Expect = 8e-38
 Identities = 85/156 (54%), Positives = 112/156 (71%), Gaps = 2/156 (1%)
 Frame = +3

Query: 3   KLIPRVDLQALAAKFGGGEAAKRTAKRTDTPAPRLICSSELQELRPLINSRRDRDSNISY 182
           KLIPR+DLQALAAKFGGG + ++ A     PAPRLI SSEL+E RPLI  +RDRD+   +
Sbjct: 274 KLIPRIDLQALAAKFGGGYSRQKMA----VPAPRLISSSELEEFRPLIQIKRDRDTGKVF 329

Query: 183 EVLDGMLLKDGYLYKKVPFDSLTLYGIQPTEDELLKF-ESRSDESNDVEWLSELYGEQEK 359
           EVLDG++LKDGY+YKK+  DSL+L+G+ PTEDELLKF  S ++ESND+EWLS+LYG+++K
Sbjct: 330 EVLDGLMLKDGYVYKKISPDSLSLWGVVPTEDELLKFGPSENNESNDLEWLSQLYGDKKK 389

Query: 360 S-CTRXXXXXXXXXXXXXXXNLENGFEVHDMVFFSR 464
               R                + NGFE++D+V F +
Sbjct: 390 KRVIRPEKGGGGKGESSSGSGVGNGFELYDLVCFGK 425


>ref|XP_003535734.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           2-like [Glycine max]
          Length = 712

 Score =  159 bits (402), Expect = 2e-37
 Identities = 84/156 (53%), Positives = 111/156 (71%), Gaps = 2/156 (1%)
 Frame = +3

Query: 3   KLIPRVDLQALAAKFGGGEAAKRTAKRTDTPAPRLICSSELQELRPLINSRRDRDSNISY 182
           KLIPR+DLQALAAKFGGG + ++ A     PAPRLI SSEL+E RPLI  +RDRD+   +
Sbjct: 273 KLIPRIDLQALAAKFGGGYSRQKMA----VPAPRLISSSELEEFRPLIQIKRDRDTGKVF 328

Query: 183 EVLDGMLLKDGYLYKKVPFDSLTLYGIQPTEDELLKF-ESRSDESNDVEWLSELYGEQEK 359
           EVLDG++LKDGY+YKKV  DSL+L+G+ PTE+ELLKF    ++ESND+EWLS+LYG+++K
Sbjct: 329 EVLDGLMLKDGYVYKKVSLDSLSLWGVVPTEEELLKFGPCENNESNDLEWLSQLYGDKKK 388

Query: 360 S-CTRXXXXXXXXXXXXXXXNLENGFEVHDMVFFSR 464
               R                + NGFE++D+V F +
Sbjct: 389 KRVIRPDKGGGGKGESSSGSGVGNGFELYDLVCFGK 424


>ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera]
          Length = 2667

 Score =  158 bits (399), Expect = 5e-37
 Identities = 82/155 (52%), Positives = 108/155 (69%), Gaps = 1/155 (0%)
 Frame = +3

Query: 3    KLIPRVDLQALAAKFGGGEAAKRTAKRTDTPAPRLICSSELQELRPLINSRRDRDSNISY 182
            KLIPR+DLQA+A KFGGG +AK+     + PAPRLI SSEL+E RPLI  RRDRD+   +
Sbjct: 1288 KLIPRIDLQAMAEKFGGGVSAKKR----NNPAPRLISSSELEEFRPLIQYRRDRDTGKLF 1343

Query: 183  EVLDGMLLKDGYLYKKVPFDSLTLYGIQPTEDELLKF-ESRSDESNDVEWLSELYGEQEK 359
            E+LDG +LKDGYLYKKV  DSL+ +G+ P+E+EL KF  S ++ES D+EWLS+LYGE+++
Sbjct: 1344 EILDGQMLKDGYLYKKVSIDSLSCWGVTPSEEELHKFTPSSNEESVDLEWLSQLYGERKQ 1403

Query: 360  SCTRXXXXXXXXXXXXXXXNLENGFEVHDMVFFSR 464
              T                ++ N FE+HD+V F R
Sbjct: 1404 KRTTKSDKGGEKGEGSSGSSMVNSFELHDLVCFGR 1438


>emb|CBI31409.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score =  158 bits (399), Expect = 5e-37
 Identities = 82/155 (52%), Positives = 108/155 (69%), Gaps = 1/155 (0%)
 Frame = +3

Query: 3   KLIPRVDLQALAAKFGGGEAAKRTAKRTDTPAPRLICSSELQELRPLINSRRDRDSNISY 182
           KLIPR+DLQA+A KFGGG +AK+     + PAPRLI SSEL+E RPLI  RRDRD+   +
Sbjct: 261 KLIPRIDLQAMAEKFGGGVSAKKR----NNPAPRLISSSELEEFRPLIQYRRDRDTGKLF 316

Query: 183 EVLDGMLLKDGYLYKKVPFDSLTLYGIQPTEDELLKF-ESRSDESNDVEWLSELYGEQEK 359
           E+LDG +LKDGYLYKKV  DSL+ +G+ P+E+EL KF  S ++ES D+EWLS+LYGE+++
Sbjct: 317 EILDGQMLKDGYLYKKVSIDSLSCWGVTPSEEELHKFTPSSNEESVDLEWLSQLYGERKQ 376

Query: 360 SCTRXXXXXXXXXXXXXXXNLENGFEVHDMVFFSR 464
             T                ++ N FE+HD+V F R
Sbjct: 377 KRTTKSDKGGEKGEGSSGSSMVNSFELHDLVCFGR 411


>ref|XP_004172849.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like, partial [Cucumis sativus]
          Length = 620

 Score =  156 bits (395), Expect = 1e-36
 Identities = 78/120 (65%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
 Frame = +3

Query: 3   KLIPRVDLQALAAKFGGGEAAKRTAKRTDTPAPRLICSSELQELRPLINSRRDRDSNISY 182
           KL+PR+DLQA+A KFGGG AAK+TA     PAPRLI SSEL E RPL+  RRDR++   +
Sbjct: 205 KLVPRIDLQAMAEKFGGGAAAKKTAN----PAPRLINSSELAEFRPLMQFRRDRETGKLF 260

Query: 183 EVLDGMLLKDGYLYKKVPFDSLTLYGIQPTEDELLKFE-SRSDESNDVEWLSELYGEQEK 359
           E LDGM+LKDGYLYKK+  DSL+ +G+ P+EDELLKF+ S S+ESND+EWLS+LYGE++K
Sbjct: 261 EFLDGMMLKDGYLYKKISLDSLSCWGVMPSEDELLKFKPSESNESNDLEWLSQLYGEKKK 320


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