BLASTX nr result

ID: Bupleurum21_contig00006046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006046
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303058.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_002265905.2| PREDICTED: uncharacterized protein LOC100245...   110   3e-22
ref|XP_002532737.1| protein translocase, putative [Ricinus commu...   108   6e-22
ref|XP_004149781.1| PREDICTED: uncharacterized protein LOC101211...   106   4e-21
gb|EEC77137.1| hypothetical protein OsI_15575 [Oryza sativa Indi...    65   8e-19

>ref|XP_002303058.1| predicted protein [Populus trichocarpa] gi|222844784|gb|EEE82331.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  113 bits (283), Expect = 2e-23
 Identities = 52/82 (63%), Positives = 64/82 (78%)
 Frame = +3

Query: 165 TSSADDWKKRIILPTXXXXXXXXXXXXXSKHRKVHGLSNISATYASNFAIVTGCYCGARE 344
           +S +++WK+RI++PT             SKHRKVHGL+NIS TYA+NF+IVTGCYCGARE
Sbjct: 22  SSFSENWKERILIPTLLAGITGGGVGLVSKHRKVHGLANISTTYATNFSIVTGCYCGARE 81

Query: 345 FVRVSRKSTPDDLMNSAIGGFG 410
           FVRV RKS PDDL+NSA+ GFG
Sbjct: 82  FVRVVRKSEPDDLVNSAVAGFG 103



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = +2

Query: 482 SYMESLQSSDSWLKLPEWSPIQVLDEEALAAKRDREQQMLAR 607
           S  +  +    WLKLPEWSPIQVLDEEALAAK  RE+++ AR
Sbjct: 149 SIFKEKEKKPGWLKLPEWSPIQVLDEEALAAKEAREKELYAR 190


>ref|XP_002265905.2| PREDICTED: uncharacterized protein LOC100245423 [Vitis vinifera]
           gi|296085621|emb|CBI29410.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  110 bits (274), Expect = 3e-22
 Identities = 55/98 (56%), Positives = 70/98 (71%), Gaps = 4/98 (4%)
 Frame = +3

Query: 129 MATPTKTLEE----EETSSADDWKKRIILPTXXXXXXXXXXXXXSKHRKVHGLSNISATY 296
           MA+  K LE     + +SS++ WK+R  +PT             SK+RKVHGL+NISATY
Sbjct: 1   MASNEKNLESSSSSDSSSSSEFWKERFFIPTLLAGIVGGGTGLVSKYRKVHGLANISATY 60

Query: 297 ASNFAIVTGCYCGAREFVRVSRKSTPDDLMNSAIGGFG 410
           A+NFAIVTGCYCGAREFVR +R + PDDL++SA+GGFG
Sbjct: 61  AANFAIVTGCYCGAREFVRRNRGTGPDDLISSAVGGFG 98



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/46 (63%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
 Frame = +2

Query: 482 SYMESL-QSSDSWLKLPEWSPIQVLDEEALAAKRDREQQMLARRNI 616
           ++ ES+ Q S+ WLKLPEWSPIQVLDEEALAAK+ REQ++  +R++
Sbjct: 140 NFSESISQKSEDWLKLPEWSPIQVLDEEALAAKKAREQKLYGQRSL 185


>ref|XP_002532737.1| protein translocase, putative [Ricinus communis]
           gi|223527514|gb|EEF29639.1| protein translocase,
           putative [Ricinus communis]
          Length = 203

 Score =  108 bits (271), Expect = 6e-22
 Identities = 50/82 (60%), Positives = 62/82 (75%)
 Frame = +3

Query: 165 TSSADDWKKRIILPTXXXXXXXXXXXXXSKHRKVHGLSNISATYASNFAIVTGCYCGARE 344
           +S +++WK+RI++PT             SKHR+ HGL++IS  YA+NFAIVTGCYCGARE
Sbjct: 21  SSFSENWKERILIPTILAGIGGGGVGLVSKHRQTHGLASISTAYATNFAIVTGCYCGARE 80

Query: 345 FVRVSRKSTPDDLMNSAIGGFG 410
           FVRVSRKS PDDL+NSA  GFG
Sbjct: 81  FVRVSRKSEPDDLVNSAFAGFG 102


>ref|XP_004149781.1| PREDICTED: uncharacterized protein LOC101211202 [Cucumis sativus]
           gi|449529275|ref|XP_004171626.1| PREDICTED:
           uncharacterized protein LOC101232073 [Cucumis sativus]
          Length = 197

 Score =  106 bits (264), Expect = 4e-21
 Identities = 54/95 (56%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
 Frame = +3

Query: 135 TPTKTLEEEETSSADD---WKKRIILPTXXXXXXXXXXXXXSKHRKVHGLSNISATYASN 305
           TP        +S++ D   WK+RI  PT             SK+RKVHGL+NISATYA+N
Sbjct: 8   TPNSDTPPFSSSTSSDYGGWKERIFYPTLLAGIVGGGAGLLSKYRKVHGLANISATYATN 67

Query: 306 FAIVTGCYCGAREFVRVSRKSTPDDLMNSAIGGFG 410
            +IV  CYCGAREFVRVSR+S PDDLMNSAI GFG
Sbjct: 68  LSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFG 102



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 32/44 (72%), Positives = 38/44 (86%), Gaps = 1/44 (2%)
 Frame = +2

Query: 482 SYMESL-QSSDSWLKLPEWSPIQVLDEEALAAKRDREQQMLARR 610
           SY ES+ + S SW+KLPEWSPIQVLDEEALAAK+ REQQ+ A+R
Sbjct: 144 SYKESIIEGSSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQR 187


>gb|EEC77137.1| hypothetical protein OsI_15575 [Oryza sativa Indica Group]
          Length = 152

 Score = 65.5 bits (158), Expect(2) = 8e-19
 Identities = 31/52 (59%), Positives = 37/52 (71%)
 Frame = +3

Query: 249 SKHRKVHGLSNISATYASNFAIVTGCYCGAREFVRVSRKSTPDDLMNSAIGG 404
           S+HR   G +  +ATYA+N AIV GCY GARE  R +R STPDD MNS +GG
Sbjct: 14  SRHRARLGAARATATYAANLAIVAGCYGGARELARDARASTPDDPMNSVVGG 65



 Score = 53.9 bits (128), Expect(2) = 8e-19
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = +2

Query: 491 ESLQSSDSWLKLPEWSPIQVLDEEALAAKRDREQQMLARR 610
           E       W  LPEWSPIQVLDEEALA KR RE+++ A+R
Sbjct: 103 EHFSGDKDWFTLPEWSPIQVLDEEALAKKRAREEKLFAQR 142


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