BLASTX nr result
ID: Bupleurum21_contig00006038
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00006038
(1500 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271635.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|... 356 e-105
ref|XP_002327407.1| predicted protein [Populus trichocarpa] gi|2... 342 2e-97
ref|XP_002334264.1| predicted protein [Populus trichocarpa] gi|2... 343 9e-92
ref|XP_003542123.1| PREDICTED: LOW QUALITY PROTEIN: protein SRG1... 311 4e-82
ref|XP_002263617.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|... 289 3e-77
>ref|XP_002271635.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|297743541|emb|CBI36408.3|
unnamed protein product [Vitis vinifera]
Length = 352
Score = 356 bits (914), Expect(2) = e-105
Identities = 172/300 (57%), Positives = 220/300 (73%), Gaps = 1/300 (0%)
Frame = -3
Query: 1129 SSQEELQKLRSALSSWGCFQAIGHGISSSNLDEIKQVAKEFFEQPVAEKKKIAKTVSEFE 950
++++ELQKL+SALSSWGCFQA GHGIS+S LDEI+QV KEFFEQP+ EKKKI+K V EFE
Sbjct: 64 TTEKELQKLKSALSSWGCFQATGHGISTSFLDEIRQVTKEFFEQPIEEKKKISKGVEEFE 123
Query: 949 GYGADPTPEEGQPLDWSDRLVLEVYPEDKKNFNLWPDKPESFRDILEXXXXXXXXXXXXX 770
GYGADPTPEEGQ LDWSDR+ L+VYPED + + WP+ P SFRD+LE
Sbjct: 124 GYGADPTPEEGQYLDWSDRVFLDVYPEDLRKYKFWPESPNSFRDVLENYTIKMKIVTEMI 183
Query: 769 XXXXXXXXXXXXXXXXXXXLNLEENCFLDQIGDQATITARFNYYSCCRRPDLVLGLKPHS 590
LNLEE CFL+Q G++ + ARFNYYS C RPD+VLGLKPH+
Sbjct: 184 SKAMAKS------------LNLEEKCFLNQFGERGALQARFNYYSRCLRPDIVLGLKPHA 231
Query: 589 DVSAFTMILQDEL-GLQIHKDDKWFTVPKLPDSLVLILGDHMEIMTNGIFKSPVHRVLSN 413
D S +T++LQ+E+ GLQI KDD W T+P + ++L++++GD MEIM+NGIFKSPVHRVL++
Sbjct: 232 DGSGYTILLQNEVDGLQILKDDCWLTIPTISNALLVLMGDQMEIMSNGIFKSPVHRVLAS 291
Query: 412 LHTERISVAMFYNPSADIEIGPHDDLVDADNPRLFKNVKDYTTTYFEYYQRGLRAIHTAQ 233
ERISVA+FY P + IGP + L+D + PRLFK VKDY +++YYQ+G RA+H A+
Sbjct: 292 SERERISVAVFYTPESGKLIGPEEGLIDEERPRLFKKVKDYADIHWKYYQKGQRALHVAK 351
Score = 52.4 bits (124), Expect(2) = e-105
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = -1
Query: 1260 EVLLSKRVQEMVLNGEEPPQLYICRDGEDTYD 1165
+VLL+KRVQEMVL GE+PPQ YICRDG+ + D
Sbjct: 10 DVLLAKRVQEMVLKGEDPPQPYICRDGDGSED 41
>ref|XP_002327407.1| predicted protein [Populus trichocarpa] gi|222835961|gb|EEE74382.1|
predicted protein [Populus trichocarpa]
Length = 352
Score = 342 bits (877), Expect(2) = 2e-97
Identities = 164/300 (54%), Positives = 215/300 (71%), Gaps = 1/300 (0%)
Frame = -3
Query: 1126 SQEELQKLRSALSSWGCFQAIGHGISSSNLDEIKQVAKEFFEQPVAEKKKIAKTVSEFEG 947
S +ELQ+LRSAL SWGCFQA GHGI S LD+I+QVA++FFEQP+ EKK+ AK V EFEG
Sbjct: 65 SAQELQRLRSALCSWGCFQATGHGIPKSFLDKIRQVARDFFEQPMEEKKRHAKGVEEFEG 124
Query: 946 YGADPTPEEGQPLDWSDRLVLEVYPEDKKNFNLWPDKPESFRDILEXXXXXXXXXXXXXX 767
YGADP P EGQ LDWSDRL L+VYPED++ WP+ P+SFR++LE
Sbjct: 125 YGADPVPAEGQSLDWSDRLFLDVYPEDRRKHKFWPENPKSFREVLEEYTSRMQILTELVS 184
Query: 766 XXXXXXXXXXXXXXXXXXLNLEENCFLDQIGDQATITARFNYYSCCRRPDLVLGLKPHSD 587
LNLE +CFL+Q G +A + ARFNYYS C+RPDLVLGLK H+D
Sbjct: 185 KAIAKS------------LNLEADCFLNQFGKRAALQARFNYYSRCQRPDLVLGLKAHAD 232
Query: 586 VSAFTMILQDEL-GLQIHKDDKWFTVPKLPDSLVLILGDHMEIMTNGIFKSPVHRVLSNL 410
S +T+ILQD++ GLQ+ +D++W TVP + D+L++++GD MEIMTNG+FKSPVHRVL+N
Sbjct: 233 GSGYTIILQDDVEGLQVFQDERWLTVPAISDALLVLMGDQMEIMTNGMFKSPVHRVLTNS 292
Query: 409 HTERISVAMFYNPSADIEIGPHDDLVDADNPRLFKNVKDYTTTYFEYYQRGLRAIHTAQI 230
ERISVA+FY P + EIGP + L++ + ++K VKDY ++EYYQ+G RA+H A++
Sbjct: 293 EKERISVAVFYTPEPNKEIGPEEGLINEERKTIYKKVKDYADVHWEYYQQGKRALHVARV 352
Score = 42.0 bits (97), Expect(2) = 2e-97
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -1
Query: 1263 AEVLLSKRVQEMVLNGEEPPQLYICRD 1183
A++LLSKRVQEMVLN EEP + YI RD
Sbjct: 9 AKILLSKRVQEMVLNDEEPQKPYISRD 35
>ref|XP_002334264.1| predicted protein [Populus trichocarpa] gi|222870502|gb|EEF07633.1|
predicted protein [Populus trichocarpa]
Length = 333
Score = 343 bits (879), Expect = 9e-92
Identities = 165/300 (55%), Positives = 215/300 (71%), Gaps = 1/300 (0%)
Frame = -3
Query: 1126 SQEELQKLRSALSSWGCFQAIGHGISSSNLDEIKQVAKEFFEQPVAEKKKIAKTVSEFEG 947
S +ELQ+LRSAL SWGCFQA GHGI S LD+I+QVA++FFEQP+ EKK+ AK V EFEG
Sbjct: 46 SAQELQRLRSALCSWGCFQATGHGIPKSFLDKIRQVARDFFEQPMEEKKRHAKGVEEFEG 105
Query: 946 YGADPTPEEGQPLDWSDRLVLEVYPEDKKNFNLWPDKPESFRDILEXXXXXXXXXXXXXX 767
YGADP P EGQ LDWSDRL L VYPED++ WP+ P+SFR++LE
Sbjct: 106 YGADPVPAEGQSLDWSDRLFLNVYPEDRRKHKFWPENPKSFREVLEEYTSRMQIFTELVS 165
Query: 766 XXXXXXXXXXXXXXXXXXLNLEENCFLDQIGDQATITARFNYYSCCRRPDLVLGLKPHSD 587
LNLE +CFL+Q G QA + ARFNYYS C+RPDLVLGLK H+D
Sbjct: 166 KAMAKS------------LNLEADCFLNQFGKQAALQARFNYYSRCQRPDLVLGLKAHAD 213
Query: 586 VSAFTMILQDEL-GLQIHKDDKWFTVPKLPDSLVLILGDHMEIMTNGIFKSPVHRVLSNL 410
S +T+ILQD++ GLQ+ +D++W TVP + D+L++++GD MEIMTNG+FKSPVHRVL+N
Sbjct: 214 GSGYTIILQDDVEGLQVFQDERWLTVPAISDALLVLMGDQMEIMTNGMFKSPVHRVLTNS 273
Query: 409 HTERISVAMFYNPSADIEIGPHDDLVDADNPRLFKNVKDYTTTYFEYYQRGLRAIHTAQI 230
ERISVA+FY P + EIGP + L++ + +++K VKDY ++E+YQ+G RAIH A++
Sbjct: 274 EKERISVAVFYTPEPNKEIGPEEGLINEERKKIYKKVKDYADVHWEHYQQGKRAIHVAKV 333
>ref|XP_003542123.1| PREDICTED: LOW QUALITY PROTEIN: protein SRG1-like, partial [Glycine
max]
Length = 318
Score = 311 bits (796), Expect = 4e-82
Identities = 161/299 (53%), Positives = 205/299 (68%), Gaps = 2/299 (0%)
Frame = -3
Query: 1123 QEELQKLRSALSSWGCFQAIGHGISSSNLDEIKQVAKEFFEQPVAEKKKIAKTVSEFEGY 944
++ELQ+LRSALS WGCF AI +G SSS LD+++QVA+EFFEQP+ +KK I+K V EFEGY
Sbjct: 16 KQELQRLRSALSCWGCFVAINYGTSSSLLDKVRQVAREFFEQPMEQKKIISKGVEEFEGY 75
Query: 943 GADPTPEEGQPLDWSDRLVLEVYPEDKKNFNLWPDKPESFRDILEXXXXXXXXXXXXXXX 764
GADP PEEGQ LDWSDRL L+V ED + +LWP+ P S RD +E
Sbjct: 76 GADPVPEEGQSLDWSDRLFLDV-SEDTRKPSLWPENPSSLRDAVEEYSAKMREATNLISK 134
Query: 763 XXXXXXXXXXXXXXXXXLNLEENCFLDQIGDQATITARFNYYS-CCRRPDLVLGLKPHSD 587
L+LEENCFL+Q G+QA + RFNYY C RRP+LVLGLKPH+D
Sbjct: 135 AIAKS------------LDLEENCFLNQFGEQALLQVRFNYYPFCTRRPNLVLGLKPHAD 182
Query: 586 VSAFTMILQDELG-LQIHKDDKWFTVPKLPDSLVLILGDHMEIMTNGIFKSPVHRVLSNL 410
S + +ILQD++ LQ+H D KWFT+ + +L++++GD M+IMTNGIFKSPVHRVL+N
Sbjct: 183 GSGYIIILQDDVERLQVHHDGKWFTISTISHALLVLMGDQMDIMTNGIFKSPVHRVLANS 242
Query: 409 HTERISVAMFYNPSADIEIGPHDDLVDADNPRLFKNVKDYTTTYFEYYQRGLRAIHTAQ 233
ERISVAMFY P + EIGP LV+ + PR Y T+++YYQRG+RAIH A+
Sbjct: 243 KRERISVAMFYTPEPNKEIGPEQSLVNEEQPRY------YADTHWKYYQRGMRAIHVAK 295
>ref|XP_002263617.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|147790901|emb|CAN77231.1|
hypothetical protein VITISV_002774 [Vitis vinifera]
gi|296084536|emb|CBI25557.3| unnamed protein product
[Vitis vinifera]
Length = 356
Score = 289 bits (739), Expect(2) = 3e-77
Identities = 143/300 (47%), Positives = 195/300 (65%), Gaps = 2/300 (0%)
Frame = -3
Query: 1123 QEELQKLRSALSSWGCFQAIGHGISSSNLDEIKQVAKEFFEQPVAEKKKIAKTVSEFEGY 944
+EELQK +S L+SWGCFQA+GHG+SSS LD++++V K+FF PV EK+K ++ EGY
Sbjct: 69 EEELQKFKSTLTSWGCFQAVGHGLSSSFLDKVREVGKQFFALPVEEKEKYSRATDGIEGY 128
Query: 943 GADPTPEEGQPLDWSDRLVLEVYPEDKKNFNLWPDKPESFRDILEXXXXXXXXXXXXXXX 764
G DP E Q LDWS RL L + P D++ LWP+ P FR++L+
Sbjct: 129 GNDPILSENQVLDWSYRLFLRLQPVDQRKLRLWPENPTEFREVLDEYGTKVKIIMDVLFK 188
Query: 763 XXXXXXXXXXXXXXXXXLNLEENCFLDQIGDQATITARFNYYSCCRRPDLVLGLKPHSDV 584
LNLEEN F + G++A + RFN+Y C RPDLVLG+KPHSD
Sbjct: 189 AMAKS------------LNLEENSFSSRFGERAVMQTRFNFYLSCPRPDLVLGVKPHSDR 236
Query: 583 SAFTMILQDEL--GLQIHKDDKWFTVPKLPDSLVLILGDHMEIMTNGIFKSPVHRVLSNL 410
S T++LQD+ GLQ+ KDDKWF VP +P +LV+ LGD M+IM+NGIFKSP+HRV++N
Sbjct: 237 SGITVLLQDKEVEGLQVFKDDKWFKVPVIPHALVVNLGDQMQIMSNGIFKSPIHRVVTNS 296
Query: 409 HTERISVAMFYNPSADIEIGPHDDLVDADNPRLFKNVKDYTTTYFEYYQRGLRAIHTAQI 230
RISVAMF P + EIGP + L+D PRL+++VK+Y + FE +Q+G+ + +A+I
Sbjct: 297 ERMRISVAMFNEPEPEKEIGPVEGLIDEKRPRLYRDVKNYASFNFECFQKGVVPLESAKI 356
Score = 28.1 bits (61), Expect(2) = 3e-77
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 1251 LSKRVQEMVLNGEEPPQLYICRD 1183
L++ VQEM +NG EPP Y ++
Sbjct: 13 LAQSVQEMSVNGNEPPPQYFLKE 35