BLASTX nr result

ID: Bupleurum21_contig00006036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006036
         (985 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35349.3| unnamed protein product [Vitis vinifera]              472   e-131
ref|XP_002270103.1| PREDICTED: WD repeat-containing protein 26 [...   472   e-131
ref|XP_002306758.1| predicted protein [Populus trichocarpa] gi|2...   445   e-123
ref|XP_002302127.1| predicted protein [Populus trichocarpa] gi|2...   442   e-122
ref|XP_002513152.1| WD-repeat protein, putative [Ricinus communi...   441   e-121

>emb|CBI35349.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  472 bits (1215), Expect = e-131
 Identities = 230/325 (70%), Positives = 265/325 (81%)
 Frame = -1

Query: 985  HSSAVTLFMQQVMDGKWDEGLATLQNIGVTDEVIVKSASFIILEQKFLDILRKEKFMDAL 806
            HS+ V LF QQV+DGKWDE + TL  IG++DE IVKSASF+ILEQKFL++L+KEK  DAL
Sbjct: 54   HSTVVDLFRQQVVDGKWDESVDTLHRIGLSDEYIVKSASFMILEQKFLELLKKEKIKDAL 113

Query: 805  RTLRNEIVPLSINDVRVHELSTYIINPSQLLALGLSDQDTAIAISRANCLEKLQKVLPAA 626
             TLRNEIVPLSIN  RVHEL+ YII PS     G S QD A + S++  LEKLQK+ PAA
Sbjct: 114  YTLRNEIVPLSINVSRVHELAAYIIFPSSGAVSGPSSQDAAGSKSQSAILEKLQKLFPAA 173

Query: 625  IMIPERRLEHLVEQALDVQRDACVFHNTLNSELSLYSDHQCGRDQIPSKTLQTLQEHKDE 446
            IMIPE+RLE LVEQALDVQRDAC +HNTL+SELSLYSDH CG + IPS+TLQ LQ H DE
Sbjct: 174  IMIPEKRLEQLVEQALDVQRDACAYHNTLDSELSLYSDHHCGTNHIPSQTLQVLQAHCDE 233

Query: 445  VWFLQFSHNGNYLASSSKDQTAVVWEVDINGQLILKHILSGHKGAVSIISWRPDDSQLLT 266
            VWFLQFSHNG YLASSSKD+ A++WEV  +G++ LKH L+GH+  VSI+SW PDD QLLT
Sbjct: 234  VWFLQFSHNGKYLASSSKDRLAIIWEVKDDGEVSLKHKLTGHQREVSIVSWSPDDQQLLT 293

Query: 265  CGAEETVRRWDVNSGECLHIYEKAGAGLISCGWLPDGKGIVSGMPDKSICLWDLHGKVTE 86
            CG EE++RRWDVNSGECLHIYEKAG GLISCGW P GKG+ SGM DKSICLWDL G+  E
Sbjct: 294  CGVEESIRRWDVNSGECLHIYEKAGVGLISCGWFPGGKGVFSGMTDKSICLWDLDGRELE 353

Query: 85   CWKGQRTENISDIAVTSDGMIIISI 11
            CWKGQRT  ISDIA+T DG  II++
Sbjct: 354  CWKGQRTLKISDIAITDDGKRIITM 378


>ref|XP_002270103.1| PREDICTED: WD repeat-containing protein 26 [Vitis vinifera]
          Length = 586

 Score =  472 bits (1215), Expect = e-131
 Identities = 230/325 (70%), Positives = 265/325 (81%)
 Frame = -1

Query: 985  HSSAVTLFMQQVMDGKWDEGLATLQNIGVTDEVIVKSASFIILEQKFLDILRKEKFMDAL 806
            HS+ V LF QQV+DGKWDE + TL  IG++DE IVKSASF+ILEQKFL++L+KEK  DAL
Sbjct: 99   HSTVVDLFRQQVVDGKWDESVDTLHRIGLSDEYIVKSASFMILEQKFLELLKKEKIKDAL 158

Query: 805  RTLRNEIVPLSINDVRVHELSTYIINPSQLLALGLSDQDTAIAISRANCLEKLQKVLPAA 626
             TLRNEIVPLSIN  RVHEL+ YII PS     G S QD A + S++  LEKLQK+ PAA
Sbjct: 159  YTLRNEIVPLSINVSRVHELAAYIIFPSSGAVSGPSSQDAAGSKSQSAILEKLQKLFPAA 218

Query: 625  IMIPERRLEHLVEQALDVQRDACVFHNTLNSELSLYSDHQCGRDQIPSKTLQTLQEHKDE 446
            IMIPE+RLE LVEQALDVQRDAC +HNTL+SELSLYSDH CG + IPS+TLQ LQ H DE
Sbjct: 219  IMIPEKRLEQLVEQALDVQRDACAYHNTLDSELSLYSDHHCGTNHIPSQTLQVLQAHCDE 278

Query: 445  VWFLQFSHNGNYLASSSKDQTAVVWEVDINGQLILKHILSGHKGAVSIISWRPDDSQLLT 266
            VWFLQFSHNG YLASSSKD+ A++WEV  +G++ LKH L+GH+  VSI+SW PDD QLLT
Sbjct: 279  VWFLQFSHNGKYLASSSKDRLAIIWEVKDDGEVSLKHKLTGHQREVSIVSWSPDDQQLLT 338

Query: 265  CGAEETVRRWDVNSGECLHIYEKAGAGLISCGWLPDGKGIVSGMPDKSICLWDLHGKVTE 86
            CG EE++RRWDVNSGECLHIYEKAG GLISCGW P GKG+ SGM DKSICLWDL G+  E
Sbjct: 339  CGVEESIRRWDVNSGECLHIYEKAGVGLISCGWFPGGKGVFSGMTDKSICLWDLDGRELE 398

Query: 85   CWKGQRTENISDIAVTSDGMIIISI 11
            CWKGQRT  ISDIA+T DG  II++
Sbjct: 399  CWKGQRTLKISDIAITDDGKRIITM 423


>ref|XP_002306758.1| predicted protein [Populus trichocarpa] gi|222856207|gb|EEE93754.1|
            predicted protein [Populus trichocarpa]
          Length = 581

 Score =  445 bits (1145), Expect = e-123
 Identities = 210/325 (64%), Positives = 257/325 (79%)
 Frame = -1

Query: 985  HSSAVTLFMQQVMDGKWDEGLATLQNIGVTDEVIVKSASFIILEQKFLDILRKEKFMDAL 806
            +SS+V +F QQ++DG WDE +ATL  IG+ DE IVKSASF+ILEQKF ++L  +K M+AL
Sbjct: 95   YSSSVDIFTQQILDGSWDESVATLHKIGLKDESIVKSASFLILEQKFFELLDGDKIMEAL 154

Query: 805  RTLRNEIVPLSINDVRVHELSTYIINPSQLLALGLSDQDTAIAISRANCLEKLQKVLPAA 626
            +TLR EI PLSIN+ RV ELS+ I+ P+   + G S+Q      SR   LE+LQK+LP  
Sbjct: 155  KTLRTEITPLSINNCRVRELSSCIVFPTHCDSDGSSNQGYGRTKSRTKLLEELQKLLPPR 214

Query: 625  IMIPERRLEHLVEQALDVQRDACVFHNTLNSELSLYSDHQCGRDQIPSKTLQTLQEHKDE 446
            ++IPE RLEHLVEQAL +Q+DAC+FHN L+ E+SLYSDHQCGRDQIPS+TLQ L+ H DE
Sbjct: 215  VIIPENRLEHLVEQALTLQKDACIFHNLLDKEMSLYSDHQCGRDQIPSRTLQILEAHSDE 274

Query: 445  VWFLQFSHNGNYLASSSKDQTAVVWEVDINGQLILKHILSGHKGAVSIISWRPDDSQLLT 266
            VWFLQFSHNG YLASSS DQ+A++WE+D+NG + LKH LSGH+  VS +SW PDD QLLT
Sbjct: 275  VWFLQFSHNGKYLASSSSDQSAIIWEIDVNGGVSLKHRLSGHQKPVSSVSWSPDDHQLLT 334

Query: 265  CGAEETVRRWDVNSGECLHIYEKAGAGLISCGWLPDGKGIVSGMPDKSICLWDLHGKVTE 86
            CG EE VRRWDV+SGECL +YEK G GL+SCGW PDGK I SG+ DKSIC+W+L GK  E
Sbjct: 335  CGVEEVVRRWDVSSGECLQVYEKVGLGLVSCGWFPDGKWIFSGINDKSICMWELDGKEVE 394

Query: 85   CWKGQRTENISDIAVTSDGMIIISI 11
            CWKGQRT  ISD+ +TSDG  IIS+
Sbjct: 395  CWKGQRTLKISDLEITSDGKQIISM 419


>ref|XP_002302127.1| predicted protein [Populus trichocarpa] gi|222843853|gb|EEE81400.1|
            predicted protein [Populus trichocarpa]
          Length = 580

 Score =  442 bits (1136), Expect = e-122
 Identities = 207/325 (63%), Positives = 257/325 (79%)
 Frame = -1

Query: 985  HSSAVTLFMQQVMDGKWDEGLATLQNIGVTDEVIVKSASFIILEQKFLDILRKEKFMDAL 806
            HSSAV LFMQQV++G WDE + TL NIG+ DE IVKSA F+ILEQKF ++L ++  +DAL
Sbjct: 94   HSSAVDLFMQQVLNGNWDESVVTLHNIGLKDENIVKSACFLILEQKFFELLDRDNIVDAL 153

Query: 805  RTLRNEIVPLSINDVRVHELSTYIINPSQLLALGLSDQDTAIAISRANCLEKLQKVLPAA 626
            +TLR EI PL IN+ R+ ELS+ I++ +   ++G S+QD      R+  LE+LQK+LP  
Sbjct: 154  KTLRTEIAPLCINNGRICELSSCIVSSTHCNSVGSSNQDNGRIKPRSKLLEELQKLLPPT 213

Query: 625  IMIPERRLEHLVEQALDVQRDACVFHNTLNSELSLYSDHQCGRDQIPSKTLQTLQEHKDE 446
            ++IPE RLEHLVEQAL +QRDAC FHN+L+ E+SLYSDHQCGRDQIPS+ LQ L+ H DE
Sbjct: 214  VIIPESRLEHLVEQALTLQRDACFFHNSLDKEMSLYSDHQCGRDQIPSRILQILEAHSDE 273

Query: 445  VWFLQFSHNGNYLASSSKDQTAVVWEVDINGQLILKHILSGHKGAVSIISWRPDDSQLLT 266
            VWFLQFSHNG YLASSS D++A++WE+D+NG + LKH LSGH+  VS +SW PDD QLLT
Sbjct: 274  VWFLQFSHNGKYLASSSNDRSAIIWEIDVNGGVSLKHRLSGHQKPVSSVSWSPDDHQLLT 333

Query: 265  CGAEETVRRWDVNSGECLHIYEKAGAGLISCGWLPDGKGIVSGMPDKSICLWDLHGKVTE 86
            CG EE VRRWDV+SGECL +YEK G GL+SCGW PDGK I SG+ DKSIC+W+L GK  E
Sbjct: 334  CGVEEVVRRWDVSSGECLQVYEKVGLGLVSCGWFPDGKWIFSGINDKSICMWELDGKEVE 393

Query: 85   CWKGQRTENISDIAVTSDGMIIISI 11
            CWKGQ+T  ISD+ +TSDG  IIS+
Sbjct: 394  CWKGQKTLKISDLEITSDGKQIISM 418


>ref|XP_002513152.1| WD-repeat protein, putative [Ricinus communis]
            gi|223548163|gb|EEF49655.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 578

 Score =  441 bits (1133), Expect = e-121
 Identities = 210/325 (64%), Positives = 260/325 (80%)
 Frame = -1

Query: 985  HSSAVTLFMQQVMDGKWDEGLATLQNIGVTDEVIVKSASFIILEQKFLDILRKEKFMDAL 806
            HS  V+LFMQQV+D KWDE +ATL+ IGV DE  VK ASF++LEQKFL +L+ +  + AL
Sbjct: 95   HSPVVSLFMQQVIDEKWDESVATLRKIGVLDETTVKMASFLLLEQKFLKLLKVDDIVAAL 154

Query: 805  RTLRNEIVPLSINDVRVHELSTYIINPSQLLALGLSDQDTAIAISRANCLEKLQKVLPAA 626
             TLRNEIVPL IN  R+HEL+  +I+P++     +  QDT  + +R+  LEKLQK+LP  
Sbjct: 155  DTLRNEIVPLRINLNRIHELAACVISPARCF---IFCQDTEGSNARSKILEKLQKLLPPT 211

Query: 625  IMIPERRLEHLVEQALDVQRDACVFHNTLNSELSLYSDHQCGRDQIPSKTLQTLQEHKDE 446
            +MIPE+RLEHLVE+ALDVQRDACVFHNTL+S+LSLYSDHQCGR+ IPS+TLQ L+ H DE
Sbjct: 212  VMIPEKRLEHLVEKALDVQRDACVFHNTLDSDLSLYSDHQCGRNWIPSQTLQILEAHDDE 271

Query: 445  VWFLQFSHNGNYLASSSKDQTAVVWEVDINGQLILKHILSGHKGAVSIISWRPDDSQLLT 266
            VWFLQFSHNG YLASSSKDQ+A++WE+  +G + LKH L GH+  V  +SW PDDSQLLT
Sbjct: 272  VWFLQFSHNGKYLASSSKDQSAIIWEIKEDGIVALKHTLKGHRKPVLTVSWSPDDSQLLT 331

Query: 265  CGAEETVRRWDVNSGECLHIYEKAGAGLISCGWLPDGKGIVSGMPDKSICLWDLHGKVTE 86
            CG EE +RRWDV+SGEC+HI+EK+G GL+SCGW PDG+GI +GM D+SICLWDL GK  E
Sbjct: 332  CGQEEVIRRWDVSSGECIHIHEKSGVGLVSCGWFPDGRGIFAGMTDRSICLWDLDGKELE 391

Query: 85   CWKGQRTENISDIAVTSDGMIIISI 11
            CWK Q+T  ISD+A+T DG  IIS+
Sbjct: 392  CWKEQKTLRISDMAITDDGKKIISM 416


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